RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
MCF2L2-203ENST00000447025 MYT1Q01538 1121 aa16.1■□□□□ 0.17
MCF2L2-203ENST00000447025 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
MCF2L2-203ENST00000447025 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
MCF2L2-203ENST00000447025 PRKCSHP14314 528 aaPredicted RBP15.25■□□□□ 0.03
MCF2L2-203ENST00000447025 APLP2Q06481 763 aa15.09■□□□□ 0.01
MCF2L2-203ENST00000447025 ERICH6Q7L0X2 663 aa15.05■□□□□ -0
MCF2L2-203ENST00000447025 DAXXQ9UER7 740 aaPredicted RBP14.8□□□□□ -0.04
MCF2L2-203ENST00000447025 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
MCF2L2-203ENST00000447025 NISCHQ9Y2I1 1504 aa14.38□□□□□ -0.11
MCF2L2-203ENST00000447025 FAM9AQ8IZU1 332 aaPredicted RBP14.24□□□□□ -0.13
MCF2L2-203ENST00000447025 EIF5BO60841 1220 aaKnown RBP14.14□□□□□ -0.15
MCF2L2-203ENST00000447025 HRCP23327 699 aa14.06□□□□□ -0.16
MCF2L2-203ENST00000447025 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
MCF2L2-203ENST00000447025 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
MCF2L2-203ENST00000447025 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
MCF2L2-203ENST00000447025 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
MCF2L2-203ENST00000447025 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
MCF2L2-203ENST00000447025 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
MCF2L2-203ENST00000447025 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
MCF2L2-203ENST00000447025 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
MCF2L2-203ENST00000447025 ARXQ96QS3 562 aa13.59□□□□□ -0.23
MCF2L2-203ENST00000447025 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
MCF2L2-203ENST00000447025 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
MCF2L2-203ENST00000447025 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
MCF2L2-203ENST00000447025 ANP32EQ9BTT0 268 aa13.49□□□□□ -0.25
MCF2L2-203ENST00000447025 RANGAP1P46060 587 aaPredicted RBP13.47□□□□□ -0.25
MCF2L2-203ENST00000447025 PPARGC1BQ86YN6 1023 aaKnown RBP13.4□□□□□ -0.26
MCF2L2-203ENST00000447025 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
MCF2L2-203ENST00000447025 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
MCF2L2-203ENST00000447025 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
MCF2L2-203ENST00000447025 TIMELESSQ9UNS1 1208 aa13.29□□□□□ -0.28
MCF2L2-203ENST00000447025 PKNOX2Q96KN3 472 aa13.28□□□□□ -0.28
MCF2L2-203ENST00000447025 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
MCF2L2-203ENST00000447025 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
MCF2L2-203ENST00000447025 PDIA4P13667 645 aaKnown RBP13.12□□□□□ -0.31
MCF2L2-203ENST00000447025 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
MCF2L2-203ENST00000447025 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
MCF2L2-203ENST00000447025 NEFLP07196 543 aa13.08□□□□□ -0.32
MCF2L2-203ENST00000447025 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
MCF2L2-203ENST00000447025 PDE4CQ08493 712 aa13.03□□□□□ -0.32
MCF2L2-203ENST00000447025 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
MCF2L2-203ENST00000447025 ERICH6BQ5W0A0 696 aa12.95□□□□□ -0.34
MCF2L2-203ENST00000447025 KCNA4P22459 653 aa12.93□□□□□ -0.34
MCF2L2-203ENST00000447025 ZEB1P37275 1124 aaPredicted RBP12.93□□□□□ -0.34
MCF2L2-203ENST00000447025 SALL2Q9Y467 1007 aaPredicted RBP12.92□□□□□ -0.34
MCF2L2-203ENST00000447025 FGD1P98174 961 aa12.85□□□□□ -0.35
MCF2L2-203ENST00000447025 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
MCF2L2-203ENST00000447025 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
MCF2L2-203ENST00000447025 ABCC9O60706 1549 aa12.79□□□□□ -0.36
MCF2L2-203ENST00000447025 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
MCF2L2-203ENST00000447025 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
MCF2L2-203ENST00000447025 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
MCF2L2-203ENST00000447025 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
MCF2L2-203ENST00000447025 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
MCF2L2-203ENST00000447025 TAOK2Q9UL54 1235 aa12.67□□□□□ -0.38
MCF2L2-203ENST00000447025 AAMPQ13685 434 aa12.66□□□□□ -0.38
MCF2L2-203ENST00000447025 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
MCF2L2-203ENST00000447025 BRD2P25440 801 aaKnown RBP12.62□□□□□ -0.39
MCF2L2-203ENST00000447025 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
MCF2L2-203ENST00000447025 TSHZ2Q9NRE2 1034 aa12.62□□□□□ -0.39
MCF2L2-203ENST00000447025 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
MCF2L2-203ENST00000447025 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
MCF2L2-203ENST00000447025 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
MCF2L2-203ENST00000447025 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
MCF2L2-203ENST00000447025 GLIPR1L2Q4G1C9 344 aa12.55□□□□□ -0.4
MCF2L2-203ENST00000447025 RSPH6AQ9H0K4 717 aa12.55□□□□□ -0.4
MCF2L2-203ENST00000447025 DHX37Q8IY37 1157 aaKnown RBP12.55□□□□□ -0.4
MCF2L2-203ENST00000447025 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
MCF2L2-203ENST00000447025 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
MCF2L2-203ENST00000447025 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
MCF2L2-203ENST00000447025 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
MCF2L2-203ENST00000447025 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
MCF2L2-203ENST00000447025 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
MCF2L2-203ENST00000447025 DEKP35659 375 aaKnown RBP12.49□□□□□ -0.41
MCF2L2-203ENST00000447025 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
MCF2L2-203ENST00000447025 ZNF326Q5BKZ1 582 aaKnown RBP12.44□□□□□ -0.42
MCF2L2-203ENST00000447025 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
MCF2L2-203ENST00000447025 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
MCF2L2-203ENST00000447025 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
MCF2L2-203ENST00000447025 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
MCF2L2-203ENST00000447025 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
MCF2L2-203ENST00000447025 CDK11AQ9UQ88 783 aaPredicted RBP12.37□□□□□ -0.43
MCF2L2-203ENST00000447025 DCAF8L2P0C7V8 631 aa12.36□□□□□ -0.43
MCF2L2-203ENST00000447025 BCANQ96GW7 911 aa12.34□□□□□ -0.43
MCF2L2-203ENST00000447025 NAP1L5Q96NT1 182 aaPredicted RBP12.33□□□□□ -0.44
MCF2L2-203ENST00000447025 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
MCF2L2-203ENST00000447025 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
MCF2L2-203ENST00000447025 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
MCF2L2-203ENST00000447025 HSP90B1P14625 803 aaKnown RBP12.28□□□□□ -0.44
MCF2L2-203ENST00000447025 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
MCF2L2-203ENST00000447025 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
MCF2L2-203ENST00000447025 SUPT16HQ9Y5B9 1047 aaKnown RBP12.23□□□□□ -0.45
MCF2L2-203ENST00000447025 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
MCF2L2-203ENST00000447025 IL27Q8NEV9 243 aa12.19□□□□□ -0.46
MCF2L2-203ENST00000447025 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
MCF2L2-203ENST00000447025 MSH5O43196 834 aa12.18□□□□□ -0.46
MCF2L2-203ENST00000447025 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
MCF2L2-203ENST00000447025 RBM19Q9Y4C8 960 aaKnown RBP12.16□□□□□ -0.46
MCF2L2-203ENST00000447025 RB1CC1Q8TDY2 1594 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms