RNA–Protein interactions for RNA: ENST00000446974.1

BRPF3-205, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 3

Gene BRPF3, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-205ENST00000446974 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
BRPF3-205ENST00000446974 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
BRPF3-205ENST00000446974 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
BRPF3-205ENST00000446974 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
BRPF3-205ENST00000446974 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
BRPF3-205ENST00000446974 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
BRPF3-205ENST00000446974 FOXD1Q16676 465 aa14.19□□□□□ -0.14
BRPF3-205ENST00000446974 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
BRPF3-205ENST00000446974 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
BRPF3-205ENST00000446974 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
BRPF3-205ENST00000446974 ABCC9O60706 1549 aa13.67□□□□□ -0.22
BRPF3-205ENST00000446974 ADRA2BP18089 450 aa13.6□□□□□ -0.23
BRPF3-205ENST00000446974 PPP6R1Q9UPN7 881 aa13.6□□□□□ -0.23
BRPF3-205ENST00000446974 PIAS4Q8N2W9 510 aaPredicted RBP13.4□□□□□ -0.26
BRPF3-205ENST00000446974 MSH5O43196 834 aa13.14□□□□□ -0.31
BRPF3-205ENST00000446974 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
BRPF3-205ENST00000446974 NACADO15069 1562 aa13.05□□□□□ -0.32
BRPF3-205ENST00000446974 MYO15BQ96JP2 1530 aa13.01□□□□□ -0.33
BRPF3-205ENST00000446974 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
BRPF3-205ENST00000446974 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
BRPF3-205ENST00000446974 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
BRPF3-205ENST00000446974 UNC13AQ9UPW8 1703 aa12.76□□□□□ -0.37
BRPF3-205ENST00000446974 DCAF8L2P0C7V8 631 aa12.71□□□□□ -0.37
BRPF3-205ENST00000446974 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
BRPF3-205ENST00000446974 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
BRPF3-205ENST00000446974 PABPN1Q86U42 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
BRPF3-205ENST00000446974 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
BRPF3-205ENST00000446974 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
BRPF3-205ENST00000446974 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
BRPF3-205ENST00000446974 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
BRPF3-205ENST00000446974 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
BRPF3-205ENST00000446974 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
BRPF3-205ENST00000446974 CUX2O14529 1486 aa12.27□□□□□ -0.44
BRPF3-205ENST00000446974 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.44
BRPF3-205ENST00000446974 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
BRPF3-205ENST00000446974 DMRT2Q9Y5R5 561 aa12.2□□□□□ -0.46
BRPF3-205ENST00000446974 CNKSR2Q8WXI2 1034 aa12.19□□□□□ -0.46
BRPF3-205ENST00000446974 ILDR1Q86SU0 546 aaPredicted RBP12.17□□□□□ -0.46
BRPF3-205ENST00000446974 KCNA4P22459 653 aa12.16□□□□□ -0.46
BRPF3-205ENST00000446974 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
BRPF3-205ENST00000446974 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
BRPF3-205ENST00000446974 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
BRPF3-205ENST00000446974 SMARCA4P51532 1647 aa12□□□□□ -0.49
BRPF3-205ENST00000446974 NPM3O75607 178 aaKnown RBP11.99□□□□□ -0.49
BRPF3-205ENST00000446974 SMARCA2P51531 1590 aa11.99□□□□□ -0.49
BRPF3-205ENST00000446974 PEG3Q9GZU2 1588 aa11.97□□□□□ -0.49
BRPF3-205ENST00000446974 HMGXB3Q12766 1538 aa11.97□□□□□ -0.49
BRPF3-205ENST00000446974 RNF216Q9NWF9 866 aaPredicted RBP11.96□□□□□ -0.49
BRPF3-205ENST00000446974 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
BRPF3-205ENST00000446974 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
BRPF3-205ENST00000446974 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
BRPF3-205ENST00000446974 BAZ1BQ9UIG0 1483 aaKnown RBP11.83□□□□□ -0.52
BRPF3-205ENST00000446974 MROH2BQ7Z745 1585 aa11.83□□□□□ -0.52
BRPF3-205ENST00000446974 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
BRPF3-205ENST00000446974 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
BRPF3-205ENST00000446974 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
BRPF3-205ENST00000446974 WIZO95785 1651 aa11.69□□□□□ -0.54
BRPF3-205ENST00000446974 RSF1Q96T23 1441 aaPredicted RBP11.66□□□□□ -0.54
BRPF3-205ENST00000446974 PDS5BQ9NTI5 1447 aa11.62□□□□□ -0.55
BRPF3-205ENST00000446974 TOP2AP11388 1531 aaKnown RBP11.62□□□□□ -0.55
BRPF3-205ENST00000446974 NESP48681 1621 aa11.62□□□□□ -0.55
BRPF3-205ENST00000446974 CADPSQ9ULU8 1353 aa11.61□□□□□ -0.55
BRPF3-205ENST00000446974 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
BRPF3-205ENST00000446974 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
BRPF3-205ENST00000446974 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
BRPF3-205ENST00000446974 KIF21AQ7Z4S6 1674 aa11.56□□□□□ -0.56
BRPF3-205ENST00000446974 CFTRP13569 1480 aa11.54□□□□□ -0.56
BRPF3-205ENST00000446974 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
BRPF3-205ENST00000446974 MRC2Q9UBG0 1479 aa11.49□□□□□ -0.57
BRPF3-205ENST00000446974 WDR62O43379 1518 aa11.49□□□□□ -0.57
BRPF3-205ENST00000446974 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
BRPF3-205ENST00000446974 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
BRPF3-205ENST00000446974 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
BRPF3-205ENST00000446974 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
BRPF3-205ENST00000446974 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
BRPF3-205ENST00000446974 CCDC88BA6NC98 1476 aa11.44□□□□□ -0.58
BRPF3-205ENST00000446974 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
BRPF3-205ENST00000446974 SOCS7O14512 581 aa11.42□□□□□ -0.58
BRPF3-205ENST00000446974 LMTK3Q96Q04 1460 aa11.4□□□□□ -0.58
BRPF3-205ENST00000446974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
BRPF3-205ENST00000446974 ABCC8Q09428 1581 aa11.36□□□□□ -0.59
BRPF3-205ENST00000446974 URB2Q14146 1524 aaKnown RBP11.34□□□□□ -0.59
BRPF3-205ENST00000446974 SUPT5HO00267 1087 aaKnown RBP11.33□□□□□ -0.6
BRPF3-205ENST00000446974 ARHGEF11O15085 1522 aa11.33□□□□□ -0.6
BRPF3-205ENST00000446974 SLC4A2P04920 1241 aa11.32□□□□□ -0.6
BRPF3-205ENST00000446974 FBXO41Q8TF61 875 aa11.28□□□□□ -0.6
BRPF3-205ENST00000446974 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
BRPF3-205ENST00000446974 TOPBP1Q92547 1522 aa11.27□□□□□ -0.61
BRPF3-205ENST00000446974 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
BRPF3-205ENST00000446974 ILDR2Q71H61 639 aa11.26□□□□□ -0.61
BRPF3-205ENST00000446974 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
BRPF3-205ENST00000446974 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
BRPF3-205ENST00000446974 WDR97A6NE52 1622 aa11.22□□□□□ -0.61
BRPF3-205ENST00000446974 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
BRPF3-205ENST00000446974 TARBP1Q13395 1621 aaKnown RBP11.19□□□□□ -0.62
BRPF3-205ENST00000446974 ZBTB22O15209 634 aa11.17□□□□□ -0.62
BRPF3-205ENST00000446974 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
BRPF3-205ENST00000446974 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
BRPF3-205ENST00000446974 EIF4G3O43432 1585 aaKnown RBP11.14□□□□□ -0.63
BRPF3-205ENST00000446974 ARAP1Q96P48 1450 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms