RNA–Protein interactions for RNA: ENST00000445722.2

RBBP4-205, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-205ENST00000445722 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
RBBP4-205ENST00000445722 CCDC180Q9P1Z9 1646 aa31.94■■■□□ 2.7
RBBP4-205ENST00000445722 ABCC9O60706 1549 aa31.3■■■□□ 2.6
RBBP4-205ENST00000445722 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
RBBP4-205ENST00000445722 NACADO15069 1562 aa30.07■■■□□ 2.4
RBBP4-205ENST00000445722 MYO15BQ96JP2 1530 aa29.87■■■□□ 2.37
RBBP4-205ENST00000445722 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
RBBP4-205ENST00000445722 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
RBBP4-205ENST00000445722 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
RBBP4-205ENST00000445722 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
RBBP4-205ENST00000445722 PABPN1Q86U42 306 aaKnown RBP eCLIP29.17■■■□□ 2.26
RBBP4-205ENST00000445722 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
RBBP4-205ENST00000445722 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
RBBP4-205ENST00000445722 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
RBBP4-205ENST00000445722 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
RBBP4-205ENST00000445722 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
RBBP4-205ENST00000445722 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
RBBP4-205ENST00000445722 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
RBBP4-205ENST00000445722 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
RBBP4-205ENST00000445722 BAZ1AQ9NRL2 1556 aaPredicted RBP27.77■■■□□ 2.04
RBBP4-205ENST00000445722 NCAPD3P42695 1498 aa27.71■■■□□ 2.03
RBBP4-205ENST00000445722 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
RBBP4-205ENST00000445722 ATAD2BQ9ULI0 1458 aa27.68■■■□□ 2.02
RBBP4-205ENST00000445722 HMGXB3Q12766 1538 aa27.59■■■□□ 2.01
RBBP4-205ENST00000445722 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
RBBP4-205ENST00000445722 MROH2BQ7Z745 1585 aa27.51■■□□□ 1.99
RBBP4-205ENST00000445722 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
RBBP4-205ENST00000445722 WIZO95785 1651 aa27.21■■□□□ 1.95
RBBP4-205ENST00000445722 RSF1Q96T23 1441 aaPredicted RBP27.15■■□□□ 1.94
RBBP4-205ENST00000445722 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
RBBP4-205ENST00000445722 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
RBBP4-205ENST00000445722 NESP48681 1621 aa27.01■■□□□ 1.91
RBBP4-205ENST00000445722 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
RBBP4-205ENST00000445722 CADPSQ9ULU8 1353 aa26.89■■□□□ 1.9
RBBP4-205ENST00000445722 CUX2O14529 1486 aa26.87■■□□□ 1.89
RBBP4-205ENST00000445722 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
RBBP4-205ENST00000445722 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
RBBP4-205ENST00000445722 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
RBBP4-205ENST00000445722 CFTRP13569 1480 aa26.69■■□□□ 1.86
RBBP4-205ENST00000445722 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
RBBP4-205ENST00000445722 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
RBBP4-205ENST00000445722 FANCD2Q9BXW9 1451 aa26.57■■□□□ 1.84
RBBP4-205ENST00000445722 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
RBBP4-205ENST00000445722 PRDM2Q13029 1718 aa26.51■■□□□ 1.83
RBBP4-205ENST00000445722 WDR62O43379 1518 aa26.49■■□□□ 1.83
RBBP4-205ENST00000445722 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
RBBP4-205ENST00000445722 SUPT5HO00267 1087 aaKnown RBP26.27■■□□□ 1.8
RBBP4-205ENST00000445722 ABCC8Q09428 1581 aa26.2■■□□□ 1.79
RBBP4-205ENST00000445722 DNAJC5Q9H3Z4 198 aa26.19■■□□□ 1.78
RBBP4-205ENST00000445722 TOPBP1Q92547 1522 aa26.12■■□□□ 1.77
RBBP4-205ENST00000445722 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
RBBP4-205ENST00000445722 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
RBBP4-205ENST00000445722 POLA1P09884 1462 aaPredicted RBP25.88■■□□□ 1.73
RBBP4-205ENST00000445722 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
RBBP4-205ENST00000445722 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
RBBP4-205ENST00000445722 CUX1P39880 1505 aa25.83■■□□□ 1.73
RBBP4-205ENST00000445722 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
RBBP4-205ENST00000445722 EIF4G3O43432 1585 aaKnown RBP25.79■■□□□ 1.72
RBBP4-205ENST00000445722 SOGA1O94964 1423 aa25.78■■□□□ 1.72
RBBP4-205ENST00000445722 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
RBBP4-205ENST00000445722 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
RBBP4-205ENST00000445722 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
RBBP4-205ENST00000445722 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.72e-9■□□□□ 9.5
RBBP4-205ENST00000445722 WRNQ14191 1432 aaPredicted RBP eCLIP25.64■■□□□ 1.7
RBBP4-205ENST00000445722 TDRD9Q8NDG6 1382 aaKnown RBP25.61■■□□□ 1.69
RBBP4-205ENST00000445722 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
RBBP4-205ENST00000445722 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
RBBP4-205ENST00000445722 ABCA10Q8WWZ4 1543 aa25.57■■□□□ 1.68
RBBP4-205ENST00000445722 SYNJ1O43426 1573 aa25.54■■□□□ 1.68
RBBP4-205ENST00000445722 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
RBBP4-205ENST00000445722 MAGI1Q96QZ7 1491 aaPredicted RBP25.5■■□□□ 1.67
RBBP4-205ENST00000445722 GAPVD1Q14C86 1478 aa25.49■■□□□ 1.67
RBBP4-205ENST00000445722 CHD1O14646 1710 aa25.49■■□□□ 1.67
RBBP4-205ENST00000445722 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
RBBP4-205ENST00000445722 ABCA5Q8WWZ7 1642 aa25.47■■□□□ 1.67
RBBP4-205ENST00000445722 PBRM1Q86U86 1689 aa25.45■■□□□ 1.66
RBBP4-205ENST00000445722 FBLN2P98095 1184 aa25.42■■□□□ 1.66
RBBP4-205ENST00000445722 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
RBBP4-205ENST00000445722 CHMP7Q8WUX9 453 aaPredicted RBP25.36■■□□□ 1.65
RBBP4-205ENST00000445722 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
RBBP4-205ENST00000445722 RIMBP3CA6NJZ7 1639 aa25.27■■□□□ 1.64
RBBP4-205ENST00000445722 RIMBP3BA6NNM3 1639 aa25.27■■□□□ 1.64
RBBP4-205ENST00000445722 RIMBP3Q9UFD9 1639 aa25.27■■□□□ 1.64
RBBP4-205ENST00000445722 ARHGEF11O15085 1522 aa25.26■■□□□ 1.63
RBBP4-205ENST00000445722 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
RBBP4-205ENST00000445722 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
RBBP4-205ENST00000445722 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
RBBP4-205ENST00000445722 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
RBBP4-205ENST00000445722 GRIN2AQ12879 1464 aa25.18■■□□□ 1.62
RBBP4-205ENST00000445722 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
RBBP4-205ENST00000445722 NUP160Q12769 1436 aa25.09■■□□□ 1.61
RBBP4-205ENST00000445722 CEP170Q5SW79 1584 aa25.03■■□□□ 1.6
RBBP4-205ENST00000445722 CUL7Q14999 1698 aa25.03■■□□□ 1.6
RBBP4-205ENST00000445722 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
RBBP4-205ENST00000445722 IGF1RP08069 1367 aa25.01■■□□□ 1.59
RBBP4-205ENST00000445722 CYB5RLQ6IPT4 315 aa24.99■■□□□ 1.59
RBBP4-205ENST00000445722 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
RBBP4-205ENST00000445722 CARMIL1Q5VZK9 1371 aa24.88■■□□□ 1.57
RBBP4-205ENST00000445722 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
RBBP4-205ENST00000445722 KIAA0586Q9BVV6 1533 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms