RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
UBE2F-216ENST00000445676 ABCC9O60706 1549 aa34.66■■■■□ 3.14
UBE2F-216ENST00000445676 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
UBE2F-216ENST00000445676 DNAJC5BQ9UF47 199 aa32.88■■■□□ 2.85
UBE2F-216ENST00000445676 RB1CC1Q8TDY2 1594 aa32.81■■■□□ 2.84
UBE2F-216ENST00000445676 NACADO15069 1562 aa32.48■■■□□ 2.79
UBE2F-216ENST00000445676 UNC13AQ9UPW8 1703 aa32.22■■■□□ 2.75
UBE2F-216ENST00000445676 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
UBE2F-216ENST00000445676 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
UBE2F-216ENST00000445676 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
UBE2F-216ENST00000445676 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
UBE2F-216ENST00000445676 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
UBE2F-216ENST00000445676 ZCCHC6Q5VYS8 1495 aaKnown RBP31.39■■■□□ 2.62
UBE2F-216ENST00000445676 CC2D2AQ9P2K1 1620 aa31.33■■■□□ 2.61
UBE2F-216ENST00000445676 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
UBE2F-216ENST00000445676 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.59
UBE2F-216ENST00000445676 SCRIBQ14160 1630 aa31.22■■■□□ 2.59
UBE2F-216ENST00000445676 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
UBE2F-216ENST00000445676 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
UBE2F-216ENST00000445676 CUX2O14529 1486 aa30.06■■■□□ 2.4
UBE2F-216ENST00000445676 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
UBE2F-216ENST00000445676 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
UBE2F-216ENST00000445676 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
UBE2F-216ENST00000445676 HMGXB3Q12766 1538 aa29.76■■■□□ 2.35
UBE2F-216ENST00000445676 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
UBE2F-216ENST00000445676 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
UBE2F-216ENST00000445676 NESP48681 1621 aa29.68■■■□□ 2.34
UBE2F-216ENST00000445676 THOC2Q8NI27 1593 aaKnown RBP29.52■■■□□ 2.32
UBE2F-216ENST00000445676 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
UBE2F-216ENST00000445676 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
UBE2F-216ENST00000445676 PEG3Q9GZU2 1588 aa29.44■■■□□ 2.3
UBE2F-216ENST00000445676 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
UBE2F-216ENST00000445676 KIF21AQ7Z4S6 1674 aa29.36■■■□□ 2.29
UBE2F-216ENST00000445676 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
UBE2F-216ENST00000445676 PDS5BQ9NTI5 1447 aa29.17■■■□□ 2.26
UBE2F-216ENST00000445676 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
UBE2F-216ENST00000445676 MRC2Q9UBG0 1479 aa28.99■■■□□ 2.23
UBE2F-216ENST00000445676 WDR62O43379 1518 aa28.97■■■□□ 2.23
UBE2F-216ENST00000445676 TRIM41Q8WV44 630 aa28.94■■■□□ 2.22
UBE2F-216ENST00000445676 WIZO95785 1651 aa28.92■■■□□ 2.22
UBE2F-216ENST00000445676 CEP164Q9UPV0 1460 aa28.78■■■□□ 2.2
UBE2F-216ENST00000445676 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
UBE2F-216ENST00000445676 CFTRP13569 1480 aa28.62■■■□□ 2.17
UBE2F-216ENST00000445676 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
UBE2F-216ENST00000445676 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
UBE2F-216ENST00000445676 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
UBE2F-216ENST00000445676 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
UBE2F-216ENST00000445676 PRDM2Q13029 1718 aa28.44■■■□□ 2.14
UBE2F-216ENST00000445676 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
UBE2F-216ENST00000445676 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
UBE2F-216ENST00000445676 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
UBE2F-216ENST00000445676 ZNF608Q9ULD9 1512 aaPredicted RBP28.25■■■□□ 2.11
UBE2F-216ENST00000445676 IFT140Q96RY7 1462 aa28.21■■■□□ 2.11
UBE2F-216ENST00000445676 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
UBE2F-216ENST00000445676 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
UBE2F-216ENST00000445676 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
UBE2F-216ENST00000445676 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
UBE2F-216ENST00000445676 CHD1O14646 1710 aa28.03■■■□□ 2.08
UBE2F-216ENST00000445676 DNMBPQ6XZF7 1577 aa28.02■■■□□ 2.08
UBE2F-216ENST00000445676 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
UBE2F-216ENST00000445676 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
UBE2F-216ENST00000445676 AQRO60306 1485 aaKnown RBP eCLIP27.9■■■□□ 2.063e-6■■■□□ 18.3
UBE2F-216ENST00000445676 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
UBE2F-216ENST00000445676 ARAP1Q96P48 1450 aa27.88■■■□□ 2.05
UBE2F-216ENST00000445676 POLA1P09884 1462 aaPredicted RBP27.83■■■□□ 2.04
UBE2F-216ENST00000445676 FBLN2P98095 1184 aa27.73■■■□□ 2.03
UBE2F-216ENST00000445676 RAD54L2Q9Y4B4 1467 aa27.72■■■□□ 2.03
UBE2F-216ENST00000445676 TRHP20396 242 aaPredicted RBP27.7■■■□□ 2.02
UBE2F-216ENST00000445676 CLASP1Q7Z460 1538 aa27.65■■■□□ 2.02
UBE2F-216ENST00000445676 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
UBE2F-216ENST00000445676 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.01
UBE2F-216ENST00000445676 SOGA1O94964 1423 aa27.63■■■□□ 2.01
UBE2F-216ENST00000445676 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
UBE2F-216ENST00000445676 FGD5Q6ZNL6 1462 aa27.58■■■□□ 2.01
UBE2F-216ENST00000445676 SYNJ1O43426 1573 aa27.56■■■□□ 2
UBE2F-216ENST00000445676 MAGI1Q96QZ7 1491 aaPredicted RBP27.53■■■□□ 2
UBE2F-216ENST00000445676 CUX1P39880 1505 aa27.52■■■□□ 2
UBE2F-216ENST00000445676 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
UBE2F-216ENST00000445676 CHMP7Q8WUX9 453 aaPredicted RBP27.45■■□□□ 1.98
UBE2F-216ENST00000445676 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
UBE2F-216ENST00000445676 SYNJ2O15056 1496 aa27.44■■□□□ 1.98
UBE2F-216ENST00000445676 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
UBE2F-216ENST00000445676 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
UBE2F-216ENST00000445676 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
UBE2F-216ENST00000445676 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
UBE2F-216ENST00000445676 AEBP2Q6ZN18 517 aaPredicted RBP27.19■■□□□ 1.94
UBE2F-216ENST00000445676 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
UBE2F-216ENST00000445676 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
UBE2F-216ENST00000445676 CEP170Q5SW79 1584 aa27.11■■□□□ 1.93
UBE2F-216ENST00000445676 NUP160Q12769 1436 aa27.07■■□□□ 1.92
UBE2F-216ENST00000445676 SHROOM2Q13796 1616 aa27.05■■□□□ 1.92
UBE2F-216ENST00000445676 BIVM-ERCC5R4GMW8 1640 aa27■■□□□ 1.91
UBE2F-216ENST00000445676 WRNQ14191 1432 aaPredicted RBP eCLIP26.99■■□□□ 1.91
UBE2F-216ENST00000445676 KIF13AQ9H1H9 1805 aa26.99■■□□□ 1.91
UBE2F-216ENST00000445676 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
UBE2F-216ENST00000445676 FHAD1B1AJZ9 1412 aa26.94■■□□□ 1.9
UBE2F-216ENST00000445676 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
UBE2F-216ENST00000445676 PRG4Q92954 1404 aaPredicted RBP26.8■■□□□ 1.88
UBE2F-216ENST00000445676 SUPT5HO00267 1087 aaKnown RBP26.78■■□□□ 1.88
UBE2F-216ENST00000445676 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms