RNA–Protein interactions for RNA: ENST00000445337.1

SRRT-203, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 446 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-203ENST00000445337 NISCHQ9Y2I1 1504 aa14.63□□□□□ -0.07
SRRT-203ENST00000445337 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
SRRT-203ENST00000445337 ABCC9O60706 1549 aa12.31□□□□□ -0.44
SRRT-203ENST00000445337 ZCCHC6Q5VYS8 1495 aaKnown RBP12.24□□□□□ -0.45
SRRT-203ENST00000445337 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
SRRT-203ENST00000445337 DCAF1Q9Y4B6 1507 aa12.04□□□□□ -0.48
SRRT-203ENST00000445337 NACADO15069 1562 aa11.95□□□□□ -0.5
SRRT-203ENST00000445337 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
SRRT-203ENST00000445337 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.5
SRRT-203ENST00000445337 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
SRRT-203ENST00000445337 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
SRRT-203ENST00000445337 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
SRRT-203ENST00000445337 PABPN1Q86U42 306 aaKnown RBP eCLIP11.62□□□□□ -0.552e-7■■■■□ 25.3
SRRT-203ENST00000445337 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
SRRT-203ENST00000445337 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
SRRT-203ENST00000445337 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
SRRT-203ENST00000445337 MROH2BQ7Z745 1585 aa11.33□□□□□ -0.6
SRRT-203ENST00000445337 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
SRRT-203ENST00000445337 SMARCA4P51532 1647 aa11.28□□□□□ -0.6
SRRT-203ENST00000445337 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
SRRT-203ENST00000445337 WIZO95785 1651 aa11.25□□□□□ -0.61
SRRT-203ENST00000445337 EIF4G1Q04637 1599 aaKnown RBP11.22□□□□□ -0.61
SRRT-203ENST00000445337 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
SRRT-203ENST00000445337 CC2D2AQ9P2K1 1620 aa11.13□□□□□ -0.63
SRRT-203ENST00000445337 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
SRRT-203ENST00000445337 DNAJC5BQ9UF47 199 aa11.09□□□□□ -0.63
SRRT-203ENST00000445337 SMARCA2P51531 1590 aa11.08□□□□□ -0.64
SRRT-203ENST00000445337 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
SRRT-203ENST00000445337 NCAPD3P42695 1498 aa11.05□□□□□ -0.64
SRRT-203ENST00000445337 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
SRRT-203ENST00000445337 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
SRRT-203ENST00000445337 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
SRRT-203ENST00000445337 CHIC1Q5VXU3 224 aa10.8□□□□□ -0.68
SRRT-203ENST00000445337 NESP48681 1621 aa10.78□□□□□ -0.68
SRRT-203ENST00000445337 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
SRRT-203ENST00000445337 CFTRP13569 1480 aa10.76□□□□□ -0.69
SRRT-203ENST00000445337 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
SRRT-203ENST00000445337 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
SRRT-203ENST00000445337 LAMC3Q9Y6N6 1575 aa10.68□□□□□ -0.7
SRRT-203ENST00000445337 TRIM41Q8WV44 630 aa10.65□□□□□ -0.7
SRRT-203ENST00000445337 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
SRRT-203ENST00000445337 KIF21AQ7Z4S6 1674 aa10.63□□□□□ -0.71
SRRT-203ENST00000445337 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
SRRT-203ENST00000445337 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
SRRT-203ENST00000445337 CUX1P39880 1505 aa10.6□□□□□ -0.71
SRRT-203ENST00000445337 PDS5BQ9NTI5 1447 aa10.59□□□□□ -0.71
SRRT-203ENST00000445337 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
SRRT-203ENST00000445337 TOP2BQ02880 1626 aa10.55□□□□□ -0.72
SRRT-203ENST00000445337 BIVM-ERCC5R4GMW8 1640 aa10.55□□□□□ -0.72
SRRT-203ENST00000445337 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
SRRT-203ENST00000445337 TOPBP1Q92547 1522 aa10.53□□□□□ -0.72
SRRT-203ENST00000445337 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
SRRT-203ENST00000445337 FAM9AQ8IZU1 332 aaPredicted RBP10.51□□□□□ -0.73
SRRT-203ENST00000445337 DNMBPQ6XZF7 1577 aa10.51□□□□□ -0.73
SRRT-203ENST00000445337 RUSC2Q8N2Y8 1516 aa10.5□□□□□ -0.73
SRRT-203ENST00000445337 SOGA1O94964 1423 aa10.5□□□□□ -0.73
SRRT-203ENST00000445337 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
SRRT-203ENST00000445337 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
SRRT-203ENST00000445337 RAD54L2Q9Y4B4 1467 aa10.47□□□□□ -0.73
SRRT-203ENST00000445337 THOC2Q8NI27 1593 aaKnown RBP10.47□□□□□ -0.73
SRRT-203ENST00000445337 POLA1P09884 1462 aaPredicted RBP10.45□□□□□ -0.74
SRRT-203ENST00000445337 LOC105371045A0A1W2PR82 267 aa10.44□□□□□ -0.74
SRRT-203ENST00000445337 WDR62O43379 1518 aa10.43□□□□□ -0.74
SRRT-203ENST00000445337 CUX2O14529 1486 aa10.42□□□□□ -0.74
SRRT-203ENST00000445337 EHMT2Q96KQ7 1210 aa10.41□□□□□ -0.74
SRRT-203ENST00000445337 TARBP1Q13395 1621 aaKnown RBP10.39□□□□□ -0.75
SRRT-203ENST00000445337 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
SRRT-203ENST00000445337 CSRNP3Q8WYN3 585 aa10.37□□□□□ -0.75
SRRT-203ENST00000445337 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
SRRT-203ENST00000445337 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
SRRT-203ENST00000445337 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
SRRT-203ENST00000445337 ZNF608Q9ULD9 1512 aaPredicted RBP10.34□□□□□ -0.75
SRRT-203ENST00000445337 IGF1RP08069 1367 aa10.33□□□□□ -0.76
SRRT-203ENST00000445337 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.763e-19■■■■■ 39.8
SRRT-203ENST00000445337 EEA1Q15075 1411 aa10.33□□□□□ -0.76
SRRT-203ENST00000445337 IFT140Q96RY7 1462 aa10.32□□□□□ -0.76
SRRT-203ENST00000445337 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
SRRT-203ENST00000445337 GAPVD1Q14C86 1478 aa10.3□□□□□ -0.76
SRRT-203ENST00000445337 PRXQ9BXM0 1461 aa10.27□□□□□ -0.77
SRRT-203ENST00000445337 RAPGEF2Q9Y4G8 1499 aa10.27□□□□□ -0.77
SRRT-203ENST00000445337 PBRM1Q86U86 1689 aa10.27□□□□□ -0.77
SRRT-203ENST00000445337 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
SRRT-203ENST00000445337 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
SRRT-203ENST00000445337 KIF21BO75037 1637 aa10.25□□□□□ -0.77
SRRT-203ENST00000445337 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
SRRT-203ENST00000445337 ERICH3Q5RHP9 1530 aa10.23□□□□□ -0.77
SRRT-203ENST00000445337 GOLGA3Q08378 1498 aa10.22□□□□□ -0.77
SRRT-203ENST00000445337 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
SRRT-203ENST00000445337 SNAPC4Q5SXM2 1469 aa10.2□□□□□ -0.78
SRRT-203ENST00000445337 CUL7Q14999 1698 aa10.19□□□□□ -0.78
SRRT-203ENST00000445337 TNIKQ9UKE5 1360 aa10.18□□□□□ -0.78
SRRT-203ENST00000445337 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
SRRT-203ENST00000445337 RANGAP1P46060 587 aaPredicted RBP10.17□□□□□ -0.78
SRRT-203ENST00000445337 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
SRRT-203ENST00000445337 FBLN2P98095 1184 aa10.14□□□□□ -0.79
SRRT-203ENST00000445337 MAGI1Q96QZ7 1491 aaPredicted RBP10.14□□□□□ -0.79
SRRT-203ENST00000445337 CHMP7Q8WUX9 453 aaPredicted RBP10.12□□□□□ -0.79
SRRT-203ENST00000445337 CEP162Q5TB80 1403 aa10.12□□□□□ -0.79
SRRT-203ENST00000445337 SYNJ2O15056 1496 aa10.11□□□□□ -0.79
SRRT-203ENST00000445337 CHD1O14646 1710 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms