RNA–Protein interactions for RNA: ENST00000445197.1

HMGN1P2-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 2, humanhuman

BASIC

Gene HMGN1P2, Length 310 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P2-201ENST00000445197 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
HMGN1P2-201ENST00000445197 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
HMGN1P2-201ENST00000445197 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
HMGN1P2-201ENST00000445197 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
HMGN1P2-201ENST00000445197 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
HMGN1P2-201ENST00000445197 ABCC9O60706 1549 aa15.13■□□□□ 0.01
HMGN1P2-201ENST00000445197 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
HMGN1P2-201ENST00000445197 FOXD1Q16676 465 aa14.9□□□□□ -0.02
HMGN1P2-201ENST00000445197 CCDC180Q9P1Z9 1646 aa14.74□□□□□ -0.05
HMGN1P2-201ENST00000445197 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
HMGN1P2-201ENST00000445197 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
HMGN1P2-201ENST00000445197 MSH5O43196 834 aa14.18□□□□□ -0.14
HMGN1P2-201ENST00000445197 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
HMGN1P2-201ENST00000445197 NACADO15069 1562 aa13.98□□□□□ -0.17
HMGN1P2-201ENST00000445197 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMGN1P2-201ENST00000445197 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
HMGN1P2-201ENST00000445197 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
HMGN1P2-201ENST00000445197 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
HMGN1P2-201ENST00000445197 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
HMGN1P2-201ENST00000445197 CECR2Q9BXF3 1484 aa13.65□□□□□ -0.22
HMGN1P2-201ENST00000445197 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
HMGN1P2-201ENST00000445197 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
HMGN1P2-201ENST00000445197 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
HMGN1P2-201ENST00000445197 SHROOM4Q9ULL8 1493 aa13.52□□□□□ -0.25
HMGN1P2-201ENST00000445197 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
HMGN1P2-201ENST00000445197 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
HMGN1P2-201ENST00000445197 ADRA2BP18089 450 aa13.33□□□□□ -0.28
HMGN1P2-201ENST00000445197 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
HMGN1P2-201ENST00000445197 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
HMGN1P2-201ENST00000445197 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
HMGN1P2-201ENST00000445197 CUX2O14529 1486 aa13.17□□□□□ -0.3
HMGN1P2-201ENST00000445197 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
HMGN1P2-201ENST00000445197 NESP48681 1621 aa12.91□□□□□ -0.34
HMGN1P2-201ENST00000445197 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
HMGN1P2-201ENST00000445197 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
HMGN1P2-201ENST00000445197 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
HMGN1P2-201ENST00000445197 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
HMGN1P2-201ENST00000445197 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
HMGN1P2-201ENST00000445197 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
HMGN1P2-201ENST00000445197 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
HMGN1P2-201ENST00000445197 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
HMGN1P2-201ENST00000445197 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
HMGN1P2-201ENST00000445197 BAZ1BQ9UIG0 1483 aaKnown RBP12.66□□□□□ -0.38
HMGN1P2-201ENST00000445197 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
HMGN1P2-201ENST00000445197 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
HMGN1P2-201ENST00000445197 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
HMGN1P2-201ENST00000445197 WDR62O43379 1518 aa12.57□□□□□ -0.4
HMGN1P2-201ENST00000445197 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
HMGN1P2-201ENST00000445197 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
HMGN1P2-201ENST00000445197 MROH2BQ7Z745 1585 aa12.48□□□□□ -0.41
HMGN1P2-201ENST00000445197 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
HMGN1P2-201ENST00000445197 RIMBP3CA6NJZ7 1639 aa12.47□□□□□ -0.41
HMGN1P2-201ENST00000445197 RIMBP3BA6NNM3 1639 aa12.47□□□□□ -0.41
HMGN1P2-201ENST00000445197 RIMBP3Q9UFD9 1639 aa12.47□□□□□ -0.41
HMGN1P2-201ENST00000445197 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
HMGN1P2-201ENST00000445197 OSCARQ8IYS5 282 aa12.45□□□□□ -0.42
HMGN1P2-201ENST00000445197 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P2-201ENST00000445197 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
HMGN1P2-201ENST00000445197 FANCD2Q9BXW9 1451 aa12.36□□□□□ -0.43
HMGN1P2-201ENST00000445197 WIZO95785 1651 aa12.35□□□□□ -0.43
HMGN1P2-201ENST00000445197 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
HMGN1P2-201ENST00000445197 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
HMGN1P2-201ENST00000445197 CFTRP13569 1480 aa12.27□□□□□ -0.45
HMGN1P2-201ENST00000445197 ZNF608Q9ULD9 1512 aaPredicted RBP12.24□□□□□ -0.45
HMGN1P2-201ENST00000445197 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
HMGN1P2-201ENST00000445197 CHD1O14646 1710 aa12.21□□□□□ -0.45
HMGN1P2-201ENST00000445197 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
HMGN1P2-201ENST00000445197 ARAP1Q96P48 1450 aa12.21□□□□□ -0.46
HMGN1P2-201ENST00000445197 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
HMGN1P2-201ENST00000445197 EIF4G3O43432 1585 aaKnown RBP12.18□□□□□ -0.46
HMGN1P2-201ENST00000445197 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
HMGN1P2-201ENST00000445197 IFT140Q96RY7 1462 aa12.16□□□□□ -0.46
HMGN1P2-201ENST00000445197 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
HMGN1P2-201ENST00000445197 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
HMGN1P2-201ENST00000445197 RSF1Q96T23 1441 aaPredicted RBP12.08□□□□□ -0.48
HMGN1P2-201ENST00000445197 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
HMGN1P2-201ENST00000445197 TARBP1Q13395 1621 aaKnown RBP12.06□□□□□ -0.48
HMGN1P2-201ENST00000445197 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
HMGN1P2-201ENST00000445197 DNMBPQ6XZF7 1577 aa12.02□□□□□ -0.49
HMGN1P2-201ENST00000445197 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
HMGN1P2-201ENST00000445197 FBLN2P98095 1184 aa12□□□□□ -0.49
HMGN1P2-201ENST00000445197 ABCC8Q09428 1581 aa11.97□□□□□ -0.49
HMGN1P2-201ENST00000445197 CCDC88BA6NC98 1476 aa11.96□□□□□ -0.49
HMGN1P2-201ENST00000445197 POLA1P09884 1462 aaPredicted RBP11.95□□□□□ -0.5
HMGN1P2-201ENST00000445197 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
HMGN1P2-201ENST00000445197 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
HMGN1P2-201ENST00000445197 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
HMGN1P2-201ENST00000445197 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
HMGN1P2-201ENST00000445197 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
HMGN1P2-201ENST00000445197 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
HMGN1P2-201ENST00000445197 WDR97A6NE52 1622 aa11.85□□□□□ -0.51
HMGN1P2-201ENST00000445197 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
HMGN1P2-201ENST00000445197 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
HMGN1P2-201ENST00000445197 SOGA1O94964 1423 aa11.84□□□□□ -0.51
HMGN1P2-201ENST00000445197 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
HMGN1P2-201ENST00000445197 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.51
HMGN1P2-201ENST00000445197 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
HMGN1P2-201ENST00000445197 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
HMGN1P2-201ENST00000445197 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
HMGN1P2-201ENST00000445197 SYNJ2O15056 1496 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms