RNA–Protein interactions for RNA: ENST00000444748.5

FSCN1-203, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 3

Gene FSCN1, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-203ENST00000444748 NISCHQ9Y2I1 1504 aa46.62■■■■■ 5.05
FSCN1-203ENST00000444748 ABCC9O60706 1549 aa42.49■■■■■ 4.39
FSCN1-203ENST00000444748 CCDC180Q9P1Z9 1646 aa42.09■■■■■ 4.33
FSCN1-203ENST00000444748 RB1CC1Q8TDY2 1594 aa40.23■■■■■ 4.03
FSCN1-203ENST00000444748 DNAJC5BQ9UF47 199 aa40.23■■■■■ 4.03
FSCN1-203ENST00000444748 NACADO15069 1562 aa39.83■■■■□ 3.97
FSCN1-203ENST00000444748 DCAF8L2P0C7V8 631 aa39.51■■■■□ 3.92
FSCN1-203ENST00000444748 UNC13AQ9UPW8 1703 aa39.5■■■■□ 3.91
FSCN1-203ENST00000444748 PABPN1Q86U42 306 aaKnown RBP eCLIP39.45■■■■□ 3.91
FSCN1-203ENST00000444748 BICRAQ9NZM4 1560 aa39.13■■■■□ 3.85
FSCN1-203ENST00000444748 MYO15BQ96JP2 1530 aa39.09■■■■□ 3.85
FSCN1-203ENST00000444748 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
FSCN1-203ENST00000444748 DCAF1Q9Y4B6 1507 aa38.45■■■■□ 3.75
FSCN1-203ENST00000444748 SHROOM4Q9ULL8 1493 aa38.45■■■■□ 3.75
FSCN1-203ENST00000444748 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.74
FSCN1-203ENST00000444748 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
FSCN1-203ENST00000444748 CECR2Q9BXF3 1484 aa38.29■■■■□ 3.72
FSCN1-203ENST00000444748 EIF4G1Q04637 1599 aaKnown RBP38.18■■■■□ 3.7
FSCN1-203ENST00000444748 DNAJC5Q9H3Z4 198 aa37.22■■■■□ 3.55
FSCN1-203ENST00000444748 CUX2O14529 1486 aa36.75■■■■□ 3.47
FSCN1-203ENST00000444748 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
FSCN1-203ENST00000444748 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
FSCN1-203ENST00000444748 ATAD2BQ9ULI0 1458 aa36.6■■■■□ 3.45
FSCN1-203ENST00000444748 SMARCA4P51532 1647 aa36.52■■■■□ 3.44
FSCN1-203ENST00000444748 SMARCA2P51531 1590 aa36.48■■■■□ 3.43
FSCN1-203ENST00000444748 HMGXB3Q12766 1538 aa36.47■■■■□ 3.43
FSCN1-203ENST00000444748 NESP48681 1621 aa36.39■■■■□ 3.42
FSCN1-203ENST00000444748 BAZ1BQ9UIG0 1483 aaKnown RBP36.23■■■■□ 3.39
FSCN1-203ENST00000444748 BAZ1AQ9NRL2 1556 aaPredicted RBP36.21■■■■□ 3.39
FSCN1-203ENST00000444748 THOC2Q8NI27 1593 aaKnown RBP36.14■■■■□ 3.38
FSCN1-203ENST00000444748 PEG3Q9GZU2 1588 aa36.12■■■■□ 3.37
FSCN1-203ENST00000444748 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
FSCN1-203ENST00000444748 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
FSCN1-203ENST00000444748 MROH2BQ7Z745 1585 aa35.94■■■■□ 3.34
FSCN1-203ENST00000444748 PDS5BQ9NTI5 1447 aa35.78■■■■□ 3.32
FSCN1-203ENST00000444748 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
FSCN1-203ENST00000444748 WIZO95785 1651 aa35.55■■■■□ 3.28
FSCN1-203ENST00000444748 MRC2Q9UBG0 1479 aa35.54■■■■□ 3.28
FSCN1-203ENST00000444748 WDR62O43379 1518 aa35.5■■■■□ 3.27
FSCN1-203ENST00000444748 TRIM41Q8WV44 630 aa35.44■■■■□ 3.26
FSCN1-203ENST00000444748 CEP164Q9UPV0 1460 aa35.32■■■■□ 3.24
FSCN1-203ENST00000444748 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
FSCN1-203ENST00000444748 CFTRP13569 1480 aa35.12■■■■□ 3.21
FSCN1-203ENST00000444748 URB2Q14146 1524 aaKnown RBP35.01■■■■□ 3.2
FSCN1-203ENST00000444748 TOP2AP11388 1531 aaKnown RBP35.01■■■■□ 3.19
FSCN1-203ENST00000444748 RSF1Q96T23 1441 aaPredicted RBP34.99■■■■□ 3.19
FSCN1-203ENST00000444748 OSCARQ8IYS5 282 aa34.96■■■■□ 3.19
FSCN1-203ENST00000444748 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
FSCN1-203ENST00000444748 RIMBP3CA6NJZ7 1639 aa34.69■■■■□ 3.14
FSCN1-203ENST00000444748 RIMBP3BA6NNM3 1639 aa34.69■■■■□ 3.14
FSCN1-203ENST00000444748 RIMBP3Q9UFD9 1639 aa34.69■■■■□ 3.14
FSCN1-203ENST00000444748 ZNF608Q9ULD9 1512 aaPredicted RBP34.65■■■■□ 3.14
FSCN1-203ENST00000444748 IFT140Q96RY7 1462 aa34.61■■■■□ 3.13
FSCN1-203ENST00000444748 CCDC88BA6NC98 1476 aa34.6■■■■□ 3.13
FSCN1-203ENST00000444748 TOPBP1Q92547 1522 aa34.54■■■■□ 3.12
FSCN1-203ENST00000444748 ARHGEF11O15085 1522 aa34.48■■■■□ 3.11
FSCN1-203ENST00000444748 EIF4G3O43432 1585 aaKnown RBP34.47■■■■□ 3.11
FSCN1-203ENST00000444748 DNMBPQ6XZF7 1577 aa34.38■■■■□ 3.09
FSCN1-203ENST00000444748 ABCC8Q09428 1581 aa34.37■■■■□ 3.09
FSCN1-203ENST00000444748 CHD1O14646 1710 aa34.37■■■■□ 3.09
FSCN1-203ENST00000444748 TARBP1Q13395 1621 aaKnown RBP34.31■■■■□ 3.08
FSCN1-203ENST00000444748 AQRO60306 1485 aaKnown RBP eCLIP34.26■■■■□ 3.072e-6■■■□□ 16.7
FSCN1-203ENST00000444748 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
FSCN1-203ENST00000444748 POLA1P09884 1462 aaPredicted RBP34.15■■■■□ 3.06
FSCN1-203ENST00000444748 ARAP1Q96P48 1450 aa34.12■■■■□ 3.05
FSCN1-203ENST00000444748 FBLN2P98095 1184 aa34.09■■■■□ 3.05
FSCN1-203ENST00000444748 RAD54L2Q9Y4B4 1467 aa34.05■■■■□ 3.04
FSCN1-203ENST00000444748 TRHP20396 242 aaPredicted RBP33.97■■■■□ 3.03
FSCN1-203ENST00000444748 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
FSCN1-203ENST00000444748 SOGA1O94964 1423 aa33.95■■■■□ 3.02
FSCN1-203ENST00000444748 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
FSCN1-203ENST00000444748 FGD5Q6ZNL6 1462 aa33.88■■■■□ 3.01
FSCN1-203ENST00000444748 WDR97A6NE52 1622 aa33.87■■■■□ 3.01
FSCN1-203ENST00000444748 CLASP1Q7Z460 1538 aa33.87■■■■□ 3.01
FSCN1-203ENST00000444748 CUX1P39880 1505 aa33.8■■■■□ 3
FSCN1-203ENST00000444748 SYNJ1O43426 1573 aa33.79■■■■□ 3
FSCN1-203ENST00000444748 MAGI1Q96QZ7 1491 aaPredicted RBP33.77■■■■□ 3
FSCN1-203ENST00000444748 CHMP7Q8WUX9 453 aaPredicted RBP33.74■■■□□ 2.99
FSCN1-203ENST00000444748 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
FSCN1-203ENST00000444748 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
FSCN1-203ENST00000444748 SYNJ2O15056 1496 aa33.66■■■□□ 2.98
FSCN1-203ENST00000444748 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
FSCN1-203ENST00000444748 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
FSCN1-203ENST00000444748 ABCA10Q8WWZ4 1543 aa33.45■■■□□ 2.95
FSCN1-203ENST00000444748 ERCC6L2Q5T890 1561 aa33.35■■■□□ 2.93
FSCN1-203ENST00000444748 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
FSCN1-203ENST00000444748 AEBP2Q6ZN18 517 aaPredicted RBP33.29■■■□□ 2.92
FSCN1-203ENST00000444748 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
FSCN1-203ENST00000444748 CEP170Q5SW79 1584 aa33.26■■■□□ 2.91
FSCN1-203ENST00000444748 NUP160Q12769 1436 aa33.19■■■□□ 2.9
FSCN1-203ENST00000444748 WRNQ14191 1432 aaPredicted RBP eCLIP33.19■■■□□ 2.92e-7■■■□□ 18.1
FSCN1-203ENST00000444748 BIVM-ERCC5R4GMW8 1640 aa33.18■■■□□ 2.9
FSCN1-203ENST00000444748 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
FSCN1-203ENST00000444748 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
FSCN1-203ENST00000444748 SUPT5HO00267 1087 aaKnown RBP33.11■■■□□ 2.89
FSCN1-203ENST00000444748 FHAD1B1AJZ9 1412 aa33.09■■■□□ 2.89
FSCN1-203ENST00000444748 KIF13AQ9H1H9 1805 aa33.05■■■□□ 2.88
FSCN1-203ENST00000444748 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
FSCN1-203ENST00000444748 PRG4Q92954 1404 aaPredicted RBP32.91■■■□□ 2.86
FSCN1-203ENST00000444748 RUSC2Q8N2Y8 1516 aa32.82■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms