RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
LINC00299-203ENST00000444688 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
LINC00299-203ENST00000444688 ABCC9O60706 1549 aa26.4■■□□□ 1.82
LINC00299-203ENST00000444688 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
LINC00299-203ENST00000444688 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
LINC00299-203ENST00000444688 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
LINC00299-203ENST00000444688 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
LINC00299-203ENST00000444688 NACADO15069 1562 aa25.73■■□□□ 1.71
LINC00299-203ENST00000444688 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.69
LINC00299-203ENST00000444688 SCRIBQ14160 1630 aa25.07■■□□□ 1.6
LINC00299-203ENST00000444688 UNC13AQ9UPW8 1703 aa24.98■■□□□ 1.59
LINC00299-203ENST00000444688 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
LINC00299-203ENST00000444688 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
LINC00299-203ENST00000444688 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
LINC00299-203ENST00000444688 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
LINC00299-203ENST00000444688 EIF4G1Q04637 1599 aaKnown RBP24.14■■□□□ 1.45
LINC00299-203ENST00000444688 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
LINC00299-203ENST00000444688 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
LINC00299-203ENST00000444688 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
LINC00299-203ENST00000444688 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
LINC00299-203ENST00000444688 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
LINC00299-203ENST00000444688 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
LINC00299-203ENST00000444688 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
LINC00299-203ENST00000444688 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
LINC00299-203ENST00000444688 DNAJC5BQ9UF47 199 aa23.79■■□□□ 1.4
LINC00299-203ENST00000444688 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
LINC00299-203ENST00000444688 WIZO95785 1651 aa23.72■■□□□ 1.39
LINC00299-203ENST00000444688 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
LINC00299-203ENST00000444688 BAZ1BQ9UIG0 1483 aaKnown RBP23.64■■□□□ 1.38
LINC00299-203ENST00000444688 SUPT5HO00267 1087 aaKnown RBP23.61■■□□□ 1.37
LINC00299-203ENST00000444688 TOP2AP11388 1531 aaKnown RBP23.54■■□□□ 1.36
LINC00299-203ENST00000444688 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
LINC00299-203ENST00000444688 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
LINC00299-203ENST00000444688 CFTRP13569 1480 aa23.04■■□□□ 1.28
LINC00299-203ENST00000444688 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
LINC00299-203ENST00000444688 NESP48681 1621 aa22.97■■□□□ 1.27
LINC00299-203ENST00000444688 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
LINC00299-203ENST00000444688 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
LINC00299-203ENST00000444688 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
LINC00299-203ENST00000444688 ERCC6Q03468 1493 aa22.74■■□□□ 1.23
LINC00299-203ENST00000444688 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
LINC00299-203ENST00000444688 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
LINC00299-203ENST00000444688 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
LINC00299-203ENST00000444688 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
LINC00299-203ENST00000444688 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
LINC00299-203ENST00000444688 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
LINC00299-203ENST00000444688 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
LINC00299-203ENST00000444688 WDR62O43379 1518 aa22.51■■□□□ 1.19
LINC00299-203ENST00000444688 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
LINC00299-203ENST00000444688 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
LINC00299-203ENST00000444688 CUX1P39880 1505 aa22.47■■□□□ 1.19
LINC00299-203ENST00000444688 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
LINC00299-203ENST00000444688 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
LINC00299-203ENST00000444688 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
LINC00299-203ENST00000444688 CUX2O14529 1486 aa22.36■■□□□ 1.17
LINC00299-203ENST00000444688 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
LINC00299-203ENST00000444688 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
LINC00299-203ENST00000444688 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
LINC00299-203ENST00000444688 TRIM41Q8WV44 630 aa22.31■■□□□ 1.16
LINC00299-203ENST00000444688 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
LINC00299-203ENST00000444688 SOGA1O94964 1423 aa22.24■■□□□ 1.15
LINC00299-203ENST00000444688 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
LINC00299-203ENST00000444688 TARBP1Q13395 1621 aaKnown RBP22.18■■□□□ 1.14
LINC00299-203ENST00000444688 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
LINC00299-203ENST00000444688 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
LINC00299-203ENST00000444688 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
LINC00299-203ENST00000444688 TDRD9Q8NDG6 1382 aaKnown RBP22.04■■□□□ 1.12
LINC00299-203ENST00000444688 KIF27Q86VH2 1401 aa22.04■■□□□ 1.12
LINC00299-203ENST00000444688 ABCA5Q8WWZ7 1642 aa22.01■■□□□ 1.11
LINC00299-203ENST00000444688 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
LINC00299-203ENST00000444688 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
LINC00299-203ENST00000444688 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
LINC00299-203ENST00000444688 EEA1Q15075 1411 aa21.95■■□□□ 1.1
LINC00299-203ENST00000444688 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
LINC00299-203ENST00000444688 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
LINC00299-203ENST00000444688 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
LINC00299-203ENST00000444688 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
LINC00299-203ENST00000444688 IGF1RP08069 1367 aa21.87■■□□□ 1.09
LINC00299-203ENST00000444688 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.09
LINC00299-203ENST00000444688 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
LINC00299-203ENST00000444688 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
LINC00299-203ENST00000444688 FAM9AQ8IZU1 332 aaPredicted RBP21.8■■□□□ 1.08
LINC00299-203ENST00000444688 CUL7Q14999 1698 aa21.79■■□□□ 1.08
LINC00299-203ENST00000444688 FHAD1B1AJZ9 1412 aa21.78■■□□□ 1.08
LINC00299-203ENST00000444688 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
LINC00299-203ENST00000444688 CARMIL1Q5VZK9 1371 aa21.75■■□□□ 1.07
LINC00299-203ENST00000444688 SYNJ2O15056 1496 aa21.74■■□□□ 1.07
LINC00299-203ENST00000444688 PRXQ9BXM0 1461 aa21.72■■□□□ 1.07
LINC00299-203ENST00000444688 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
LINC00299-203ENST00000444688 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
LINC00299-203ENST00000444688 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
LINC00299-203ENST00000444688 FBLN2P98095 1184 aa21.64■■□□□ 1.05
LINC00299-203ENST00000444688 KIF21BO75037 1637 aa21.64■■□□□ 1.05
LINC00299-203ENST00000444688 CHD1O14646 1710 aa21.6■■□□□ 1.05
LINC00299-203ENST00000444688 GOLGA3Q08378 1498 aa21.58■■□□□ 1.04
LINC00299-203ENST00000444688 NUP160Q12769 1436 aa21.55■■□□□ 1.04
LINC00299-203ENST00000444688 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
LINC00299-203ENST00000444688 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
LINC00299-203ENST00000444688 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
LINC00299-203ENST00000444688 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms