RNA–Protein interactions for RNA: ENST00000444611.5

ZNF561-208, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 1,031 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-208ENST00000444611 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
ZNF561-208ENST00000444611 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
ZNF561-208ENST00000444611 ABCC9O60706 1549 aa21.56■■□□□ 1.04
ZNF561-208ENST00000444611 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
ZNF561-208ENST00000444611 NACADO15069 1562 aa20.38■□□□□ 0.85
ZNF561-208ENST00000444611 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
ZNF561-208ENST00000444611 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
ZNF561-208ENST00000444611 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
ZNF561-208ENST00000444611 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
ZNF561-208ENST00000444611 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
ZNF561-208ENST00000444611 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
ZNF561-208ENST00000444611 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
ZNF561-208ENST00000444611 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
ZNF561-208ENST00000444611 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
ZNF561-208ENST00000444611 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
ZNF561-208ENST00000444611 CC2D2AQ9P2K1 1620 aa19.49■□□□□ 0.71
ZNF561-208ENST00000444611 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
ZNF561-208ENST00000444611 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
ZNF561-208ENST00000444611 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
ZNF561-208ENST00000444611 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
ZNF561-208ENST00000444611 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
ZNF561-208ENST00000444611 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
ZNF561-208ENST00000444611 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
ZNF561-208ENST00000444611 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
ZNF561-208ENST00000444611 HMGXB3Q12766 1538 aa18.7■□□□□ 0.58
ZNF561-208ENST00000444611 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
ZNF561-208ENST00000444611 NESP48681 1621 aa18.62■□□□□ 0.57
ZNF561-208ENST00000444611 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
ZNF561-208ENST00000444611 WIZO95785 1651 aa18.52■□□□□ 0.56
ZNF561-208ENST00000444611 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
ZNF561-208ENST00000444611 CUX2O14529 1486 aa18.42■□□□□ 0.54
ZNF561-208ENST00000444611 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
ZNF561-208ENST00000444611 KIF21AQ7Z4S6 1674 aa18.37■□□□□ 0.53
ZNF561-208ENST00000444611 THOC2Q8NI27 1593 aaKnown RBP18.36■□□□□ 0.53
ZNF561-208ENST00000444611 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
ZNF561-208ENST00000444611 DNAJC5Q9H3Z4 198 aa18.31■□□□□ 0.52
ZNF561-208ENST00000444611 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
ZNF561-208ENST00000444611 PDS5BQ9NTI5 1447 aa18.23■□□□□ 0.51
ZNF561-208ENST00000444611 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
ZNF561-208ENST00000444611 CFTRP13569 1480 aa18.12■□□□□ 0.49
ZNF561-208ENST00000444611 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
ZNF561-208ENST00000444611 WDR62O43379 1518 aa18.08■□□□□ 0.49
ZNF561-208ENST00000444611 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
ZNF561-208ENST00000444611 CEP164Q9UPV0 1460 aa18.05■□□□□ 0.48
ZNF561-208ENST00000444611 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
ZNF561-208ENST00000444611 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
ZNF561-208ENST00000444611 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
ZNF561-208ENST00000444611 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
ZNF561-208ENST00000444611 ZNF608Q9ULD9 1512 aaPredicted RBP17.76■□□□□ 0.43
ZNF561-208ENST00000444611 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
ZNF561-208ENST00000444611 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
ZNF561-208ENST00000444611 TARBP1Q13395 1621 aaKnown RBP17.65■□□□□ 0.42
ZNF561-208ENST00000444611 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
ZNF561-208ENST00000444611 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
ZNF561-208ENST00000444611 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
ZNF561-208ENST00000444611 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
ZNF561-208ENST00000444611 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
ZNF561-208ENST00000444611 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■■ 29
ZNF561-208ENST00000444611 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
ZNF561-208ENST00000444611 TRIM41Q8WV44 630 aa17.57■□□□□ 0.4
ZNF561-208ENST00000444611 CUX1P39880 1505 aa17.57■□□□□ 0.4
ZNF561-208ENST00000444611 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
ZNF561-208ENST00000444611 CHD1O14646 1710 aa17.5■□□□□ 0.39
ZNF561-208ENST00000444611 SOGA1O94964 1423 aa17.49■□□□□ 0.39
ZNF561-208ENST00000444611 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
ZNF561-208ENST00000444611 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
ZNF561-208ENST00000444611 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
ZNF561-208ENST00000444611 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
ZNF561-208ENST00000444611 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
ZNF561-208ENST00000444611 ARHGEF11O15085 1522 aa17.39■□□□□ 0.37
ZNF561-208ENST00000444611 SNAPC4Q5SXM2 1469 aa17.38■□□□□ 0.37
ZNF561-208ENST00000444611 FBLN2P98095 1184 aa17.37■□□□□ 0.37
ZNF561-208ENST00000444611 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
ZNF561-208ENST00000444611 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
ZNF561-208ENST00000444611 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
ZNF561-208ENST00000444611 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
ZNF561-208ENST00000444611 ABCA10Q8WWZ4 1543 aa17.3■□□□□ 0.36
ZNF561-208ENST00000444611 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
ZNF561-208ENST00000444611 GAPVD1Q14C86 1478 aa17.28■□□□□ 0.36
ZNF561-208ENST00000444611 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
ZNF561-208ENST00000444611 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
ZNF561-208ENST00000444611 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
ZNF561-208ENST00000444611 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
ZNF561-208ENST00000444611 WRNQ14191 1432 aaPredicted RBP eCLIP17.24■□□□□ 0.35
ZNF561-208ENST00000444611 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
ZNF561-208ENST00000444611 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
ZNF561-208ENST00000444611 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
ZNF561-208ENST00000444611 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
ZNF561-208ENST00000444611 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
ZNF561-208ENST00000444611 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
ZNF561-208ENST00000444611 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
ZNF561-208ENST00000444611 ERICH3Q5RHP9 1530 aa17.06■□□□□ 0.32
ZNF561-208ENST00000444611 NUP160Q12769 1436 aa17.05■□□□□ 0.32
ZNF561-208ENST00000444611 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
ZNF561-208ENST00000444611 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
ZNF561-208ENST00000444611 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
ZNF561-208ENST00000444611 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
ZNF561-208ENST00000444611 IGF1RP08069 1367 aa16.93■□□□□ 0.3
ZNF561-208ENST00000444611 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
ZNF561-208ENST00000444611 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms