RNA–Protein interactions for RNA: ENST00000443508.6

CCDC144NL-AS1-206, CCDC144NL antisense RNA 1, humanhuman

TSL 3 BASIC

Gene CCDC144NL-AS1, Length 1,216 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-206ENST00000443508 AEBP2Q6ZN18 517 aaPredicted RBP29.51■■■□□ 2.31
CCDC144NL-AS1-206ENST00000443508 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
CCDC144NL-AS1-206ENST00000443508 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.87
CCDC144NL-AS1-206ENST00000443508 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
CCDC144NL-AS1-206ENST00000443508 SENP3Q9H4L4 574 aaPredicted RBP24.97■■□□□ 1.59
CCDC144NL-AS1-206ENST00000443508 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
CCDC144NL-AS1-206ENST00000443508 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
CCDC144NL-AS1-206ENST00000443508 FOXD1Q16676 465 aa23.2■■□□□ 1.3
CCDC144NL-AS1-206ENST00000443508 ABCC9O60706 1549 aa22.91■■□□□ 1.26
CCDC144NL-AS1-206ENST00000443508 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
CCDC144NL-AS1-206ENST00000443508 ADRA2BP18089 450 aa22.4■■□□□ 1.18
CCDC144NL-AS1-206ENST00000443508 DCAF8L2P0C7V8 631 aa22.31■■□□□ 1.16
CCDC144NL-AS1-206ENST00000443508 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
CCDC144NL-AS1-206ENST00000443508 NACADO15069 1562 aa22.21■■□□□ 1.15
CCDC144NL-AS1-206ENST00000443508 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
CCDC144NL-AS1-206ENST00000443508 MYO15BQ96JP2 1530 aa22.16■■□□□ 1.14
CCDC144NL-AS1-206ENST00000443508 DCAF1Q9Y4B6 1507 aa22.13■■□□□ 1.13
CCDC144NL-AS1-206ENST00000443508 PIAS4Q8N2W9 510 aaPredicted RBP21.89■■□□□ 1.09
CCDC144NL-AS1-206ENST00000443508 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
CCDC144NL-AS1-206ENST00000443508 UNC13AQ9UPW8 1703 aa21.5■■□□□ 1.03
CCDC144NL-AS1-206ENST00000443508 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
CCDC144NL-AS1-206ENST00000443508 BICRAQ9NZM4 1560 aa21.39■■□□□ 1.01
CCDC144NL-AS1-206ENST00000443508 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
CCDC144NL-AS1-206ENST00000443508 MSH5O43196 834 aa21.31■■□□□ 1
CCDC144NL-AS1-206ENST00000443508 EIF4G1Q04637 1599 aaKnown RBP20.86■□□□□ 0.93
CCDC144NL-AS1-206ENST00000443508 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
CCDC144NL-AS1-206ENST00000443508 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
CCDC144NL-AS1-206ENST00000443508 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
CCDC144NL-AS1-206ENST00000443508 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
CCDC144NL-AS1-206ENST00000443508 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
CCDC144NL-AS1-206ENST00000443508 SMARCA4P51532 1647 aa20.64■□□□□ 0.9
CCDC144NL-AS1-206ENST00000443508 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
CCDC144NL-AS1-206ENST00000443508 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
CCDC144NL-AS1-206ENST00000443508 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
CCDC144NL-AS1-206ENST00000443508 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
CCDC144NL-AS1-206ENST00000443508 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
CCDC144NL-AS1-206ENST00000443508 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
CCDC144NL-AS1-206ENST00000443508 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
CCDC144NL-AS1-206ENST00000443508 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
CCDC144NL-AS1-206ENST00000443508 BAZ1BQ9UIG0 1483 aaKnown RBP20.37■□□□□ 0.85
CCDC144NL-AS1-206ENST00000443508 KCNA4P22459 653 aa20.37■□□□□ 0.85
CCDC144NL-AS1-206ENST00000443508 WIZO95785 1651 aa20.32■□□□□ 0.84
CCDC144NL-AS1-206ENST00000443508 MAPK8IP2Q13387 824 aaPredicted RBP20.3■□□□□ 0.84
CCDC144NL-AS1-206ENST00000443508 TOP2AP11388 1531 aaKnown RBP20.17■□□□□ 0.82
CCDC144NL-AS1-206ENST00000443508 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
CCDC144NL-AS1-206ENST00000443508 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
CCDC144NL-AS1-206ENST00000443508 CNKSR2Q8WXI2 1034 aa20.1■□□□□ 0.81
CCDC144NL-AS1-206ENST00000443508 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
CCDC144NL-AS1-206ENST00000443508 CCDC88BA6NC98 1476 aa19.93■□□□□ 0.78
CCDC144NL-AS1-206ENST00000443508 CADPSQ9ULU8 1353 aa19.93■□□□□ 0.78
CCDC144NL-AS1-206ENST00000443508 NPM3O75607 178 aaKnown RBP19.92■□□□□ 0.78
CCDC144NL-AS1-206ENST00000443508 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
CCDC144NL-AS1-206ENST00000443508 NESP48681 1621 aa19.85■□□□□ 0.77
CCDC144NL-AS1-206ENST00000443508 CFTRP13569 1480 aa19.82■□□□□ 0.76
CCDC144NL-AS1-206ENST00000443508 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
CCDC144NL-AS1-206ENST00000443508 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
CCDC144NL-AS1-206ENST00000443508 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
CCDC144NL-AS1-206ENST00000443508 FANCD2Q9BXW9 1451 aa19.67■□□□□ 0.74
CCDC144NL-AS1-206ENST00000443508 CEP164Q9UPV0 1460 aa19.63■□□□□ 0.73
CCDC144NL-AS1-206ENST00000443508 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
CCDC144NL-AS1-206ENST00000443508 HOXD11P31277 338 aaPredicted RBP19.59■□□□□ 0.73
CCDC144NL-AS1-206ENST00000443508 KIF21AQ7Z4S6 1674 aa19.58■□□□□ 0.72
CCDC144NL-AS1-206ENST00000443508 MRC2Q9UBG0 1479 aa19.55■□□□□ 0.72
CCDC144NL-AS1-206ENST00000443508 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
CCDC144NL-AS1-206ENST00000443508 CUX2O14529 1486 aa19.48■□□□□ 0.71
CCDC144NL-AS1-206ENST00000443508 WDR62O43379 1518 aa19.45■□□□□ 0.7
CCDC144NL-AS1-206ENST00000443508 ABCC8Q09428 1581 aa19.44■□□□□ 0.7
CCDC144NL-AS1-206ENST00000443508 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
CCDC144NL-AS1-206ENST00000443508 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
CCDC144NL-AS1-206ENST00000443508 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
CCDC144NL-AS1-206ENST00000443508 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
CCDC144NL-AS1-206ENST00000443508 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
CCDC144NL-AS1-206ENST00000443508 POTEDQ86YR6 584 aa19.28■□□□□ 0.68
CCDC144NL-AS1-206ENST00000443508 CUX1P39880 1505 aa19.26■□□□□ 0.67
CCDC144NL-AS1-206ENST00000443508 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
CCDC144NL-AS1-206ENST00000443508 DNAJC5Q9H3Z4 198 aa19.22■□□□□ 0.67
CCDC144NL-AS1-206ENST00000443508 POLA1P09884 1462 aaPredicted RBP19.21■□□□□ 0.67
CCDC144NL-AS1-206ENST00000443508 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
CCDC144NL-AS1-206ENST00000443508 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
CCDC144NL-AS1-206ENST00000443508 SOGA1O94964 1423 aa19.18■□□□□ 0.66
CCDC144NL-AS1-206ENST00000443508 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
CCDC144NL-AS1-206ENST00000443508 BIVM-ERCC5R4GMW8 1640 aa19.15■□□□□ 0.66
CCDC144NL-AS1-206ENST00000443508 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
CCDC144NL-AS1-206ENST00000443508 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CCDC144NL-AS1-206ENST00000443508 TARBP1Q13395 1621 aaKnown RBP19.08■□□□□ 0.65
CCDC144NL-AS1-206ENST00000443508 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
CCDC144NL-AS1-206ENST00000443508 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
CCDC144NL-AS1-206ENST00000443508 ZNF608Q9ULD9 1512 aaPredicted RBP19.05■□□□□ 0.64
CCDC144NL-AS1-206ENST00000443508 WDR97A6NE52 1622 aa19.02■□□□□ 0.64
CCDC144NL-AS1-206ENST00000443508 TDRD9Q8NDG6 1382 aaKnown RBP19.02■□□□□ 0.64
CCDC144NL-AS1-206ENST00000443508 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.63
CCDC144NL-AS1-206ENST00000443508 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
CCDC144NL-AS1-206ENST00000443508 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
CCDC144NL-AS1-206ENST00000443508 GAPVD1Q14C86 1478 aa18.95■□□□□ 0.62
CCDC144NL-AS1-206ENST00000443508 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
CCDC144NL-AS1-206ENST00000443508 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
CCDC144NL-AS1-206ENST00000443508 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
CCDC144NL-AS1-206ENST00000443508 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
CCDC144NL-AS1-206ENST00000443508 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
CCDC144NL-AS1-206ENST00000443508 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms