RNA–Protein interactions for RNA: ENST00000443297.5

ACTR3-203, Transcript of ARP3 actin related protein 3 homolog, humanhuman

TSL 4

Gene ACTR3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-203ENST00000443297 NISCHQ9Y2I1 1504 aa33.94■■■■□ 3.02
ACTR3-203ENST00000443297 ABCC9O60706 1549 aa30.91■■■□□ 2.54
ACTR3-203ENST00000443297 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
ACTR3-203ENST00000443297 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
ACTR3-203ENST00000443297 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
ACTR3-203ENST00000443297 NACADO15069 1562 aa29.01■■■□□ 2.23
ACTR3-203ENST00000443297 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
ACTR3-203ENST00000443297 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
ACTR3-203ENST00000443297 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
ACTR3-203ENST00000443297 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
ACTR3-203ENST00000443297 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
ACTR3-203ENST00000443297 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
ACTR3-203ENST00000443297 SHROOM4Q9ULL8 1493 aa28.04■■■□□ 2.08
ACTR3-203ENST00000443297 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
ACTR3-203ENST00000443297 CC2D2AQ9P2K1 1620 aa27.95■■■□□ 2.06
ACTR3-203ENST00000443297 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
ACTR3-203ENST00000443297 CECR2Q9BXF3 1484 aa27.86■■■□□ 2.05
ACTR3-203ENST00000443297 EIF4G1Q04637 1599 aaKnown RBP27.81■■■□□ 2.04
ACTR3-203ENST00000443297 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
ACTR3-203ENST00000443297 CUX2O14529 1486 aa26.76■■□□□ 1.87
ACTR3-203ENST00000443297 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
ACTR3-203ENST00000443297 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
ACTR3-203ENST00000443297 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
ACTR3-203ENST00000443297 SMARCA4P51532 1647 aa26.6■■□□□ 1.85
ACTR3-203ENST00000443297 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
ACTR3-203ENST00000443297 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
ACTR3-203ENST00000443297 NESP48681 1621 aa26.48■■□□□ 1.83
ACTR3-203ENST00000443297 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
ACTR3-203ENST00000443297 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
ACTR3-203ENST00000443297 THOC2Q8NI27 1593 aaKnown RBP26.36■■□□□ 1.81
ACTR3-203ENST00000443297 PEG3Q9GZU2 1588 aa26.33■■□□□ 1.8
ACTR3-203ENST00000443297 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
ACTR3-203ENST00000443297 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
ACTR3-203ENST00000443297 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
ACTR3-203ENST00000443297 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
ACTR3-203ENST00000443297 CADPSQ9ULU8 1353 aa25.89■■□□□ 1.74
ACTR3-203ENST00000443297 MRC2Q9UBG0 1479 aa25.89■■□□□ 1.73
ACTR3-203ENST00000443297 WIZO95785 1651 aa25.87■■□□□ 1.73
ACTR3-203ENST00000443297 WDR62O43379 1518 aa25.87■■□□□ 1.73
ACTR3-203ENST00000443297 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
ACTR3-203ENST00000443297 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
ACTR3-203ENST00000443297 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
ACTR3-203ENST00000443297 CFTRP13569 1480 aa25.57■■□□□ 1.68
ACTR3-203ENST00000443297 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
ACTR3-203ENST00000443297 URB2Q14146 1524 aaKnown RBP25.48■■□□□ 1.67
ACTR3-203ENST00000443297 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
ACTR3-203ENST00000443297 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
ACTR3-203ENST00000443297 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
ACTR3-203ENST00000443297 RIMBP3CA6NJZ7 1639 aa25.26■■□□□ 1.63
ACTR3-203ENST00000443297 RIMBP3BA6NNM3 1639 aa25.26■■□□□ 1.63
ACTR3-203ENST00000443297 RIMBP3Q9UFD9 1639 aa25.26■■□□□ 1.63
ACTR3-203ENST00000443297 ZNF608Q9ULD9 1512 aaPredicted RBP25.22■■□□□ 1.63
ACTR3-203ENST00000443297 IFT140Q96RY7 1462 aa25.19■■□□□ 1.62
ACTR3-203ENST00000443297 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
ACTR3-203ENST00000443297 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
ACTR3-203ENST00000443297 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
ACTR3-203ENST00000443297 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
ACTR3-203ENST00000443297 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
ACTR3-203ENST00000443297 CHD1O14646 1710 aa25.03■■□□□ 1.6
ACTR3-203ENST00000443297 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
ACTR3-203ENST00000443297 TARBP1Q13395 1621 aaKnown RBP24.99■■□□□ 1.59
ACTR3-203ENST00000443297 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.58
ACTR3-203ENST00000443297 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
ACTR3-203ENST00000443297 ARAP1Q96P48 1450 aa24.85■■□□□ 1.57
ACTR3-203ENST00000443297 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
ACTR3-203ENST00000443297 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
ACTR3-203ENST00000443297 FBLN2P98095 1184 aa24.72■■□□□ 1.55
ACTR3-203ENST00000443297 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
ACTR3-203ENST00000443297 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
ACTR3-203ENST00000443297 CLASP1Q7Z460 1538 aa24.68■■□□□ 1.54
ACTR3-203ENST00000443297 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
ACTR3-203ENST00000443297 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
ACTR3-203ENST00000443297 SOGA1O94964 1423 aa24.67■■□□□ 1.54
ACTR3-203ENST00000443297 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
ACTR3-203ENST00000443297 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
ACTR3-203ENST00000443297 CUX1P39880 1505 aa24.61■■□□□ 1.53
ACTR3-203ENST00000443297 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
ACTR3-203ENST00000443297 PBRM1Q86U86 1689 aa24.55■■□□□ 1.52
ACTR3-203ENST00000443297 GRIN2BQ13224 1484 aa24.53■■□□□ 1.52
ACTR3-203ENST00000443297 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
ACTR3-203ENST00000443297 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
ACTR3-203ENST00000443297 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
ACTR3-203ENST00000443297 GAPVD1Q14C86 1478 aa24.4■■□□□ 1.5
ACTR3-203ENST00000443297 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
ACTR3-203ENST00000443297 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
ACTR3-203ENST00000443297 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
ACTR3-203ENST00000443297 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
ACTR3-203ENST00000443297 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
ACTR3-203ENST00000443297 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
ACTR3-203ENST00000443297 NUP160Q12769 1436 aa24.18■■□□□ 1.46
ACTR3-203ENST00000443297 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
ACTR3-203ENST00000443297 WRNQ14191 1432 aaPredicted RBP eCLIP24.14■■□□□ 1.45
ACTR3-203ENST00000443297 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
ACTR3-203ENST00000443297 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
ACTR3-203ENST00000443297 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
ACTR3-203ENST00000443297 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
ACTR3-203ENST00000443297 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
ACTR3-203ENST00000443297 SUPT5HO00267 1087 aaKnown RBP24■■□□□ 1.43
ACTR3-203ENST00000443297 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
ACTR3-203ENST00000443297 PRG4Q92954 1404 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms