RNA–Protein interactions for RNA: ENST00000443018.2

AC239800.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239800.2, Length 2,675 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239800.2-201ENST00000443018 NISCHQ9Y2I1 1504 aa23.84■■□□□ 1.41
AC239800.2-201ENST00000443018 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.87
AC239800.2-201ENST00000443018 DCAF8L2P0C7V8 631 aa20.16■□□□□ 0.82
AC239800.2-201ENST00000443018 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
AC239800.2-201ENST00000443018 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
AC239800.2-201ENST00000443018 ABCC9O60706 1549 aa19.85■□□□□ 0.77
AC239800.2-201ENST00000443018 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
AC239800.2-201ENST00000443018 HRCP23327 699 aa19.43■□□□□ 0.7
AC239800.2-201ENST00000443018 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
AC239800.2-201ENST00000443018 NACADO15069 1562 aa19.18■□□□□ 0.66
AC239800.2-201ENST00000443018 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
AC239800.2-201ENST00000443018 SUPT5HO00267 1087 aaKnown RBP19.18■□□□□ 0.66
AC239800.2-201ENST00000443018 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
AC239800.2-201ENST00000443018 RB1CC1Q8TDY2 1594 aa19.05■□□□□ 0.64
AC239800.2-201ENST00000443018 PCGF6Q9BYE7 350 aa19.03■□□□□ 0.64
AC239800.2-201ENST00000443018 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
AC239800.2-201ENST00000443018 PELP1Q8IZL8 1130 aaKnown RBP18.87■□□□□ 0.61
AC239800.2-201ENST00000443018 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
AC239800.2-201ENST00000443018 UNC13AQ9UPW8 1703 aa18.78■□□□□ 0.6
AC239800.2-201ENST00000443018 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
AC239800.2-201ENST00000443018 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
AC239800.2-201ENST00000443018 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
AC239800.2-201ENST00000443018 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
AC239800.2-201ENST00000443018 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
AC239800.2-201ENST00000443018 SCAF1Q9H7N4 1312 aaKnown RBP18.47■□□□□ 0.55
AC239800.2-201ENST00000443018 WIZO95785 1651 aa18.39■□□□□ 0.54
AC239800.2-201ENST00000443018 BAZ1AQ9NRL2 1556 aaPredicted RBP18.34■□□□□ 0.53
AC239800.2-201ENST00000443018 TRIM26Q12899 539 aaPredicted RBP18.33■□□□□ 0.52
AC239800.2-201ENST00000443018 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
AC239800.2-201ENST00000443018 SMARCA4P51532 1647 aa18.3■□□□□ 0.52
AC239800.2-201ENST00000443018 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
AC239800.2-201ENST00000443018 MYT1Q01538 1121 aa18.14■□□□□ 0.49
AC239800.2-201ENST00000443018 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
AC239800.2-201ENST00000443018 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
AC239800.2-201ENST00000443018 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.48
AC239800.2-201ENST00000443018 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
AC239800.2-201ENST00000443018 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
AC239800.2-201ENST00000443018 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
AC239800.2-201ENST00000443018 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
AC239800.2-201ENST00000443018 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
AC239800.2-201ENST00000443018 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
AC239800.2-201ENST00000443018 DNAJC5Q9H3Z4 198 aa17.89■□□□□ 0.45
AC239800.2-201ENST00000443018 TRIM41Q8WV44 630 aa17.86■□□□□ 0.45
AC239800.2-201ENST00000443018 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
AC239800.2-201ENST00000443018 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
AC239800.2-201ENST00000443018 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
AC239800.2-201ENST00000443018 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
AC239800.2-201ENST00000443018 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
AC239800.2-201ENST00000443018 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
AC239800.2-201ENST00000443018 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
AC239800.2-201ENST00000443018 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
AC239800.2-201ENST00000443018 DIEXFQ68CQ4 756 aaKnown RBP17.61■□□□□ 0.41
AC239800.2-201ENST00000443018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
AC239800.2-201ENST00000443018 CCER1Q8TC90 406 aaPredicted RBP17.56■□□□□ 0.4
AC239800.2-201ENST00000443018 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
AC239800.2-201ENST00000443018 CFTRP13569 1480 aa17.47■□□□□ 0.39
AC239800.2-201ENST00000443018 NESP48681 1621 aa17.46■□□□□ 0.39
AC239800.2-201ENST00000443018 SOGA1O94964 1423 aa17.45■□□□□ 0.38
AC239800.2-201ENST00000443018 SYNJ1O43426 1573 aa17.44■□□□□ 0.38
AC239800.2-201ENST00000443018 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
AC239800.2-201ENST00000443018 RUSC2Q8N2Y8 1516 aa17.43■□□□□ 0.38
AC239800.2-201ENST00000443018 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
AC239800.2-201ENST00000443018 CUX2O14529 1486 aa17.3■□□□□ 0.36
AC239800.2-201ENST00000443018 CUX1P39880 1505 aa17.3■□□□□ 0.36
AC239800.2-201ENST00000443018 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
AC239800.2-201ENST00000443018 TOP2BQ02880 1626 aa17.24■□□□□ 0.35
AC239800.2-201ENST00000443018 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
AC239800.2-201ENST00000443018 ZNF316A6NFI3 1004 aaPredicted RBP17.23■□□□□ 0.35
AC239800.2-201ENST00000443018 TTBK1Q5TCY1 1321 aaPredicted RBP17.2■□□□□ 0.34
AC239800.2-201ENST00000443018 MIER1Q8N108 512 aa17.16■□□□□ 0.34
AC239800.2-201ENST00000443018 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
AC239800.2-201ENST00000443018 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
AC239800.2-201ENST00000443018 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
AC239800.2-201ENST00000443018 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
AC239800.2-201ENST00000443018 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
AC239800.2-201ENST00000443018 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
AC239800.2-201ENST00000443018 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
AC239800.2-201ENST00000443018 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
AC239800.2-201ENST00000443018 RAD54L2Q9Y4B4 1467 aa17.09■□□□□ 0.33
AC239800.2-201ENST00000443018 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.32
AC239800.2-201ENST00000443018 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
AC239800.2-201ENST00000443018 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
AC239800.2-201ENST00000443018 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
AC239800.2-201ENST00000443018 BCL11AQ9H165 835 aa17.05■□□□□ 0.32
AC239800.2-201ENST00000443018 EEA1Q15075 1411 aa17.05■□□□□ 0.32
AC239800.2-201ENST00000443018 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
AC239800.2-201ENST00000443018 POLA1P09884 1462 aaPredicted RBP17.02■□□□□ 0.32
AC239800.2-201ENST00000443018 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
AC239800.2-201ENST00000443018 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
AC239800.2-201ENST00000443018 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
AC239800.2-201ENST00000443018 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
AC239800.2-201ENST00000443018 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
AC239800.2-201ENST00000443018 SUPT16HQ9Y5B9 1047 aaKnown RBP16.95■□□□□ 0.3
AC239800.2-201ENST00000443018 IGF1RP08069 1367 aa16.95■□□□□ 0.3
AC239800.2-201ENST00000443018 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
AC239800.2-201ENST00000443018 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
AC239800.2-201ENST00000443018 TSHZ2Q9NRE2 1034 aa16.91■□□□□ 0.3
AC239800.2-201ENST00000443018 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
AC239800.2-201ENST00000443018 KIF21BO75037 1637 aa16.87■□□□□ 0.29
AC239800.2-201ENST00000443018 ABCA10Q8WWZ4 1543 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms