RNA–Protein interactions for RNA: ENST00000442940.1

PNPLA4-202, Transcript of patatin like phospholipase domain containing 4, humanhuman

TSL 2

Gene PNPLA4, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA4-202ENST00000442940 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
PNPLA4-202ENST00000442940 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
PNPLA4-202ENST00000442940 ABCC9O60706 1549 aa22.45■■□□□ 1.18
PNPLA4-202ENST00000442940 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
PNPLA4-202ENST00000442940 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
PNPLA4-202ENST00000442940 RB1CC1Q8TDY2 1594 aa21.33■■□□□ 1.01
PNPLA4-202ENST00000442940 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
PNPLA4-202ENST00000442940 NACADO15069 1562 aa21.1■□□□□ 0.97
PNPLA4-202ENST00000442940 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
PNPLA4-202ENST00000442940 UNC13AQ9UPW8 1703 aa20.87■□□□□ 0.93
PNPLA4-202ENST00000442940 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
PNPLA4-202ENST00000442940 MYO15BQ96JP2 1530 aa20.7■□□□□ 0.9
PNPLA4-202ENST00000442940 BICRAQ9NZM4 1560 aa20.63■□□□□ 0.89
PNPLA4-202ENST00000442940 SHROOM4Q9ULL8 1493 aa20.43■□□□□ 0.86
PNPLA4-202ENST00000442940 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
PNPLA4-202ENST00000442940 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
PNPLA4-202ENST00000442940 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
PNPLA4-202ENST00000442940 CECR2Q9BXF3 1484 aa20.27■□□□□ 0.84
PNPLA4-202ENST00000442940 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
PNPLA4-202ENST00000442940 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
PNPLA4-202ENST00000442940 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
PNPLA4-202ENST00000442940 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
PNPLA4-202ENST00000442940 CUX2O14529 1486 aa19.51■□□□□ 0.71
PNPLA4-202ENST00000442940 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
PNPLA4-202ENST00000442940 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
PNPLA4-202ENST00000442940 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
PNPLA4-202ENST00000442940 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
PNPLA4-202ENST00000442940 HMGXB3Q12766 1538 aa19.3■□□□□ 0.68
PNPLA4-202ENST00000442940 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
PNPLA4-202ENST00000442940 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
PNPLA4-202ENST00000442940 NESP48681 1621 aa19.18■□□□□ 0.66
PNPLA4-202ENST00000442940 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
PNPLA4-202ENST00000442940 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
PNPLA4-202ENST00000442940 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
PNPLA4-202ENST00000442940 LAMC3Q9Y6N6 1575 aa19.1■□□□□ 0.65
PNPLA4-202ENST00000442940 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
PNPLA4-202ENST00000442940 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
PNPLA4-202ENST00000442940 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
PNPLA4-202ENST00000442940 MROH2BQ7Z745 1585 aa18.92■□□□□ 0.62
PNPLA4-202ENST00000442940 MRC2Q9UBG0 1479 aa18.82■□□□□ 0.6
PNPLA4-202ENST00000442940 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
PNPLA4-202ENST00000442940 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
PNPLA4-202ENST00000442940 WDR62O43379 1518 aa18.78■□□□□ 0.6
PNPLA4-202ENST00000442940 WIZO95785 1651 aa18.73■□□□□ 0.59
PNPLA4-202ENST00000442940 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
PNPLA4-202ENST00000442940 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
PNPLA4-202ENST00000442940 CFTRP13569 1480 aa18.54■□□□□ 0.56
PNPLA4-202ENST00000442940 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
PNPLA4-202ENST00000442940 PRDM2Q13029 1718 aa18.51■□□□□ 0.55
PNPLA4-202ENST00000442940 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
PNPLA4-202ENST00000442940 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
PNPLA4-202ENST00000442940 RSF1Q96T23 1441 aaPredicted RBP18.41■□□□□ 0.54
PNPLA4-202ENST00000442940 RIMBP3CA6NJZ7 1639 aa18.37■□□□□ 0.53
PNPLA4-202ENST00000442940 RIMBP3BA6NNM3 1639 aa18.37■□□□□ 0.53
PNPLA4-202ENST00000442940 RIMBP3Q9UFD9 1639 aa18.37■□□□□ 0.53
PNPLA4-202ENST00000442940 FOXD1Q16676 465 aa18.33■□□□□ 0.52
PNPLA4-202ENST00000442940 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
PNPLA4-202ENST00000442940 ZNF608Q9ULD9 1512 aaPredicted RBP18.27■□□□□ 0.51
PNPLA4-202ENST00000442940 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
PNPLA4-202ENST00000442940 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
PNPLA4-202ENST00000442940 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
PNPLA4-202ENST00000442940 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
PNPLA4-202ENST00000442940 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
PNPLA4-202ENST00000442940 CHD1O14646 1710 aa18.19■□□□□ 0.5
PNPLA4-202ENST00000442940 DNMBPQ6XZF7 1577 aa18.19■□□□□ 0.5
PNPLA4-202ENST00000442940 TARBP1Q13395 1621 aaKnown RBP18.11■□□□□ 0.49
PNPLA4-202ENST00000442940 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
PNPLA4-202ENST00000442940 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
PNPLA4-202ENST00000442940 FBLN2P98095 1184 aa18.05■□□□□ 0.48
PNPLA4-202ENST00000442940 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
PNPLA4-202ENST00000442940 ARAP1Q96P48 1450 aa18.03■□□□□ 0.48
PNPLA4-202ENST00000442940 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
PNPLA4-202ENST00000442940 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
PNPLA4-202ENST00000442940 SOGA1O94964 1423 aa17.94■□□□□ 0.46
PNPLA4-202ENST00000442940 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
PNPLA4-202ENST00000442940 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
PNPLA4-202ENST00000442940 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
PNPLA4-202ENST00000442940 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
PNPLA4-202ENST00000442940 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
PNPLA4-202ENST00000442940 MAGI1Q96QZ7 1491 aaPredicted RBP17.89■□□□□ 0.45
PNPLA4-202ENST00000442940 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
PNPLA4-202ENST00000442940 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
PNPLA4-202ENST00000442940 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
PNPLA4-202ENST00000442940 PBRM1Q86U86 1689 aa17.83■□□□□ 0.45
PNPLA4-202ENST00000442940 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
PNPLA4-202ENST00000442940 CUX1P39880 1505 aa17.8■□□□□ 0.44
PNPLA4-202ENST00000442940 GAPVD1Q14C86 1478 aa17.73■□□□□ 0.43
PNPLA4-202ENST00000442940 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
PNPLA4-202ENST00000442940 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
PNPLA4-202ENST00000442940 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
PNPLA4-202ENST00000442940 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
PNPLA4-202ENST00000442940 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
PNPLA4-202ENST00000442940 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
PNPLA4-202ENST00000442940 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
PNPLA4-202ENST00000442940 ERCC6L2Q5T890 1561 aa17.56■□□□□ 0.4
PNPLA4-202ENST00000442940 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
PNPLA4-202ENST00000442940 NUP160Q12769 1436 aa17.53■□□□□ 0.4
PNPLA4-202ENST00000442940 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
PNPLA4-202ENST00000442940 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
PNPLA4-202ENST00000442940 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms