RNA–Protein interactions for RNA: ENST00000442869.5

RCL1-206, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 1,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-206ENST00000442869 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
RCL1-206ENST00000442869 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
RCL1-206ENST00000442869 ABCC9O60706 1549 aa27.68■■■□□ 2.02
RCL1-206ENST00000442869 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.85
RCL1-206ENST00000442869 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
RCL1-206ENST00000442869 RB1CC1Q8TDY2 1594 aa26.38■■□□□ 1.81
RCL1-206ENST00000442869 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
RCL1-206ENST00000442869 NACADO15069 1562 aa26.25■■□□□ 1.79
RCL1-206ENST00000442869 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
RCL1-206ENST00000442869 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
RCL1-206ENST00000442869 UNC13AQ9UPW8 1703 aa25.85■■□□□ 1.73
RCL1-206ENST00000442869 PABPN1Q86U42 306 aaKnown RBP eCLIP25.85■■□□□ 1.73
RCL1-206ENST00000442869 ZCCHC6Q5VYS8 1495 aaKnown RBP25.78■■□□□ 1.72
RCL1-206ENST00000442869 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
RCL1-206ENST00000442869 BICRAQ9NZM4 1560 aa25.64■■□□□ 1.7
RCL1-206ENST00000442869 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
RCL1-206ENST00000442869 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
RCL1-206ENST00000442869 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
RCL1-206ENST00000442869 EIF4G1Q04637 1599 aaKnown RBP24.98■■□□□ 1.59
RCL1-206ENST00000442869 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
RCL1-206ENST00000442869 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
RCL1-206ENST00000442869 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
RCL1-206ENST00000442869 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.46
RCL1-206ENST00000442869 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
RCL1-206ENST00000442869 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
RCL1-206ENST00000442869 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
RCL1-206ENST00000442869 MROH2BQ7Z745 1585 aa23.98■■□□□ 1.43
RCL1-206ENST00000442869 BAZ1BQ9UIG0 1483 aaKnown RBP23.96■■□□□ 1.43
RCL1-206ENST00000442869 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
RCL1-206ENST00000442869 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
RCL1-206ENST00000442869 NESP48681 1621 aa23.84■■□□□ 1.41
RCL1-206ENST00000442869 CUX2O14529 1486 aa23.74■■□□□ 1.39
RCL1-206ENST00000442869 WIZO95785 1651 aa23.72■■□□□ 1.39
RCL1-206ENST00000442869 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
RCL1-206ENST00000442869 DNAJC5Q9H3Z4 198 aa23.61■■□□□ 1.37
RCL1-206ENST00000442869 RSF1Q96T23 1441 aaPredicted RBP23.55■■□□□ 1.36
RCL1-206ENST00000442869 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
RCL1-206ENST00000442869 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
RCL1-206ENST00000442869 PDS5BQ9NTI5 1447 aa23.52■■□□□ 1.36
RCL1-206ENST00000442869 THOC2Q8NI27 1593 aaKnown RBP23.51■■□□□ 1.35
RCL1-206ENST00000442869 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
RCL1-206ENST00000442869 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
RCL1-206ENST00000442869 CFTRP13569 1480 aa23.29■■□□□ 1.32
RCL1-206ENST00000442869 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
RCL1-206ENST00000442869 FANCD2Q9BXW9 1451 aa23.25■■□□□ 1.31
RCL1-206ENST00000442869 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
RCL1-206ENST00000442869 WDR62O43379 1518 aa23.23■■□□□ 1.31
RCL1-206ENST00000442869 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
RCL1-206ENST00000442869 PRDM2Q13029 1718 aa23.06■■□□□ 1.28
RCL1-206ENST00000442869 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
RCL1-206ENST00000442869 TOPBP1Q92547 1522 aa22.83■■□□□ 1.25
RCL1-206ENST00000442869 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
RCL1-206ENST00000442869 IFT140Q96RY7 1462 aa22.77■■□□□ 1.24
RCL1-206ENST00000442869 ZNF608Q9ULD9 1512 aaPredicted RBP22.76■■□□□ 1.23
RCL1-206ENST00000442869 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
RCL1-206ENST00000442869 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
RCL1-206ENST00000442869 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
RCL1-206ENST00000442869 TRIM41Q8WV44 630 aa22.65■■□□□ 1.22
RCL1-206ENST00000442869 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
RCL1-206ENST00000442869 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
RCL1-206ENST00000442869 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
RCL1-206ENST00000442869 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.215e-7■■■■□ 25.2
RCL1-206ENST00000442869 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
RCL1-206ENST00000442869 SOGA1O94964 1423 aa22.54■■□□□ 1.2
RCL1-206ENST00000442869 CUX1P39880 1505 aa22.51■■□□□ 1.19
RCL1-206ENST00000442869 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
RCL1-206ENST00000442869 SENP3Q9H4L4 574 aaPredicted RBP22.49■■□□□ 1.19
RCL1-206ENST00000442869 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
RCL1-206ENST00000442869 FBLN2P98095 1184 aa22.43■■□□□ 1.18
RCL1-206ENST00000442869 CHD1O14646 1710 aa22.43■■□□□ 1.18
RCL1-206ENST00000442869 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
RCL1-206ENST00000442869 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
RCL1-206ENST00000442869 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
RCL1-206ENST00000442869 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
RCL1-206ENST00000442869 WDR97A6NE52 1622 aa22.34■■□□□ 1.17
RCL1-206ENST00000442869 SNAPC4Q5SXM2 1469 aa22.32■■□□□ 1.16
RCL1-206ENST00000442869 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
RCL1-206ENST00000442869 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
RCL1-206ENST00000442869 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
RCL1-206ENST00000442869 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
RCL1-206ENST00000442869 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
RCL1-206ENST00000442869 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
RCL1-206ENST00000442869 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
RCL1-206ENST00000442869 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
RCL1-206ENST00000442869 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
RCL1-206ENST00000442869 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
RCL1-206ENST00000442869 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
RCL1-206ENST00000442869 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
RCL1-206ENST00000442869 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
RCL1-206ENST00000442869 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
RCL1-206ENST00000442869 ARAP1Q96P48 1450 aa22.14■■□□□ 1.13
RCL1-206ENST00000442869 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
RCL1-206ENST00000442869 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
RCL1-206ENST00000442869 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
RCL1-206ENST00000442869 FHAD1B1AJZ9 1412 aa21.95■■□□□ 1.1
RCL1-206ENST00000442869 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
RCL1-206ENST00000442869 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
RCL1-206ENST00000442869 NUP160Q12769 1436 aa21.91■■□□□ 1.1
RCL1-206ENST00000442869 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
RCL1-206ENST00000442869 SHROOM2Q13796 1616 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms