RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
TRIM13-205ENST00000442421 ABCC9O60706 1549 aa29.63■■■□□ 2.33
TRIM13-205ENST00000442421 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
TRIM13-205ENST00000442421 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
TRIM13-205ENST00000442421 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
TRIM13-205ENST00000442421 NACADO15069 1562 aa27.8■■■□□ 2.04
TRIM13-205ENST00000442421 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
TRIM13-205ENST00000442421 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
TRIM13-205ENST00000442421 PABPN1Q86U42 306 aaKnown RBP eCLIP27.51■■□□□ 1.99
TRIM13-205ENST00000442421 BICRAQ9NZM4 1560 aa27.3■■□□□ 1.96
TRIM13-205ENST00000442421 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
TRIM13-205ENST00000442421 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.91
TRIM13-205ENST00000442421 DCAF1Q9Y4B6 1507 aa26.86■■□□□ 1.89
TRIM13-205ENST00000442421 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
TRIM13-205ENST00000442421 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
TRIM13-205ENST00000442421 CC2D2AQ9P2K1 1620 aa26.77■■□□□ 1.88
TRIM13-205ENST00000442421 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
TRIM13-205ENST00000442421 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
TRIM13-205ENST00000442421 DNAJC5Q9H3Z4 198 aa25.85■■□□□ 1.73
TRIM13-205ENST00000442421 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
TRIM13-205ENST00000442421 CUX2O14529 1486 aa25.6■■□□□ 1.69
TRIM13-205ENST00000442421 ERCC6Q03468 1493 aa25.59■■□□□ 1.69
TRIM13-205ENST00000442421 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
TRIM13-205ENST00000442421 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
TRIM13-205ENST00000442421 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
TRIM13-205ENST00000442421 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
TRIM13-205ENST00000442421 NESP48681 1621 aa25.39■■□□□ 1.66
TRIM13-205ENST00000442421 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
TRIM13-205ENST00000442421 BAZ1BQ9UIG0 1483 aaKnown RBP25.3■■□□□ 1.64
TRIM13-205ENST00000442421 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
TRIM13-205ENST00000442421 THOC2Q8NI27 1593 aaKnown RBP25.21■■□□□ 1.63
TRIM13-205ENST00000442421 LAMC3Q9Y6N6 1575 aa25.15■■□□□ 1.62
TRIM13-205ENST00000442421 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
TRIM13-205ENST00000442421 MROH2BQ7Z745 1585 aa25.12■■□□□ 1.61
TRIM13-205ENST00000442421 PDS5BQ9NTI5 1447 aa24.96■■□□□ 1.59
TRIM13-205ENST00000442421 WIZO95785 1651 aa24.85■■□□□ 1.57
TRIM13-205ENST00000442421 CADPSQ9ULU8 1353 aa24.84■■□□□ 1.57
TRIM13-205ENST00000442421 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
TRIM13-205ENST00000442421 WDR62O43379 1518 aa24.76■■□□□ 1.55
TRIM13-205ENST00000442421 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
TRIM13-205ENST00000442421 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
TRIM13-205ENST00000442421 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
TRIM13-205ENST00000442421 CFTRP13569 1480 aa24.52■■□□□ 1.52
TRIM13-205ENST00000442421 TOP2AP11388 1531 aaKnown RBP24.47■■□□□ 1.51
TRIM13-205ENST00000442421 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
TRIM13-205ENST00000442421 URB2Q14146 1524 aaKnown RBP24.44■■□□□ 1.5
TRIM13-205ENST00000442421 PRDM2Q13029 1718 aa24.41■■□□□ 1.5
TRIM13-205ENST00000442421 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
TRIM13-205ENST00000442421 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
TRIM13-205ENST00000442421 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
TRIM13-205ENST00000442421 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
TRIM13-205ENST00000442421 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
TRIM13-205ENST00000442421 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
TRIM13-205ENST00000442421 IFT140Q96RY7 1462 aa24.15■■□□□ 1.46
TRIM13-205ENST00000442421 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
TRIM13-205ENST00000442421 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
TRIM13-205ENST00000442421 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
TRIM13-205ENST00000442421 DNMBPQ6XZF7 1577 aa24.02■■□□□ 1.44
TRIM13-205ENST00000442421 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
TRIM13-205ENST00000442421 CHD1O14646 1710 aa23.99■■□□□ 1.43
TRIM13-205ENST00000442421 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
TRIM13-205ENST00000442421 AQRO60306 1485 aaKnown RBP eCLIP23.91■■□□□ 1.426e-15■■■■■ 98.7
TRIM13-205ENST00000442421 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
TRIM13-205ENST00000442421 CYB5RLQ6IPT4 315 aa23.83■■□□□ 1.41
TRIM13-205ENST00000442421 FBLN2P98095 1184 aa23.79■■□□□ 1.4
TRIM13-205ENST00000442421 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
TRIM13-205ENST00000442421 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
TRIM13-205ENST00000442421 TDRD9Q8NDG6 1382 aaKnown RBP23.71■■□□□ 1.39
TRIM13-205ENST00000442421 SOGA1O94964 1423 aa23.7■■□□□ 1.38
TRIM13-205ENST00000442421 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
TRIM13-205ENST00000442421 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
TRIM13-205ENST00000442421 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
TRIM13-205ENST00000442421 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
TRIM13-205ENST00000442421 CUX1P39880 1505 aa23.63■■□□□ 1.37
TRIM13-205ENST00000442421 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
TRIM13-205ENST00000442421 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
TRIM13-205ENST00000442421 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
TRIM13-205ENST00000442421 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
TRIM13-205ENST00000442421 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
TRIM13-205ENST00000442421 GRIN2BQ13224 1484 aa23.54■■□□□ 1.36
TRIM13-205ENST00000442421 SYNJ2O15056 1496 aa23.5■■□□□ 1.35
TRIM13-205ENST00000442421 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
TRIM13-205ENST00000442421 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
TRIM13-205ENST00000442421 ABCA10Q8WWZ4 1543 aa23.37■■□□□ 1.33
TRIM13-205ENST00000442421 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
TRIM13-205ENST00000442421 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
TRIM13-205ENST00000442421 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
TRIM13-205ENST00000442421 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
TRIM13-205ENST00000442421 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
TRIM13-205ENST00000442421 WRNQ14191 1432 aaPredicted RBP eCLIP23.21■■□□□ 1.31
TRIM13-205ENST00000442421 BIVM-ERCC5R4GMW8 1640 aa23.2■■□□□ 1.3
TRIM13-205ENST00000442421 TOP2BQ02880 1626 aa23.18■■□□□ 1.3
TRIM13-205ENST00000442421 NUP160Q12769 1436 aa23.16■■□□□ 1.3
TRIM13-205ENST00000442421 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
TRIM13-205ENST00000442421 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
TRIM13-205ENST00000442421 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
TRIM13-205ENST00000442421 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.28
TRIM13-205ENST00000442421 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
TRIM13-205ENST00000442421 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
TRIM13-205ENST00000442421 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms