RNA–Protein interactions for RNA: ENST00000442272.1

KLHL18-204, Transcript of kelch like family member 18, humanhuman

TSL 2

Gene KLHL18, Length 2,249 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL18-204ENST00000442272 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
KLHL18-204ENST00000442272 CCDC180Q9P1Z9 1646 aa27.72■■■□□ 2.03
KLHL18-204ENST00000442272 ABCC9O60706 1549 aa26.77■■□□□ 1.88
KLHL18-204ENST00000442272 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
KLHL18-204ENST00000442272 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
KLHL18-204ENST00000442272 DCAF1Q9Y4B6 1507 aa26.13■■□□□ 1.77
KLHL18-204ENST00000442272 NACADO15069 1562 aa25.95■■□□□ 1.75
KLHL18-204ENST00000442272 MYO15BQ96JP2 1530 aa25.94■■□□□ 1.74
KLHL18-204ENST00000442272 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
KLHL18-204ENST00000442272 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
KLHL18-204ENST00000442272 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
KLHL18-204ENST00000442272 UNC13AQ9UPW8 1703 aa25.31■■□□□ 1.64
KLHL18-204ENST00000442272 PABPN1Q86U42 306 aaKnown RBP eCLIP25.25■■□□□ 1.63
KLHL18-204ENST00000442272 BICRAQ9NZM4 1560 aa25.13■■□□□ 1.61
KLHL18-204ENST00000442272 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
KLHL18-204ENST00000442272 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
KLHL18-204ENST00000442272 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
KLHL18-204ENST00000442272 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
KLHL18-204ENST00000442272 BAZ1AQ9NRL2 1556 aaPredicted RBP24.49■■□□□ 1.51
KLHL18-204ENST00000442272 SMARCA4P51532 1647 aa24.45■■□□□ 1.5
KLHL18-204ENST00000442272 EIF4G1Q04637 1599 aaKnown RBP24.4■■□□□ 1.5
KLHL18-204ENST00000442272 WIZO95785 1651 aa24.31■■□□□ 1.48
KLHL18-204ENST00000442272 ATAD2BQ9ULI0 1458 aa24.18■■□□□ 1.46
KLHL18-204ENST00000442272 CC2D2AQ9P2K1 1620 aa24.14■■□□□ 1.46
KLHL18-204ENST00000442272 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
KLHL18-204ENST00000442272 SMARCA2P51531 1590 aa24.09■■□□□ 1.45
KLHL18-204ENST00000442272 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
KLHL18-204ENST00000442272 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
KLHL18-204ENST00000442272 NCAPD3P42695 1498 aa24.01■■□□□ 1.43
KLHL18-204ENST00000442272 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
KLHL18-204ENST00000442272 HMGXB3Q12766 1538 aa23.89■■□□□ 1.41
KLHL18-204ENST00000442272 CCDC88BA6NC98 1476 aa23.81■■□□□ 1.4
KLHL18-204ENST00000442272 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
KLHL18-204ENST00000442272 NESP48681 1621 aa23.39■■□□□ 1.34
KLHL18-204ENST00000442272 CFTRP13569 1480 aa23.38■■□□□ 1.33
KLHL18-204ENST00000442272 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
KLHL18-204ENST00000442272 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
KLHL18-204ENST00000442272 LAMC3Q9Y6N6 1575 aa23.21■■□□□ 1.31
KLHL18-204ENST00000442272 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
KLHL18-204ENST00000442272 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
KLHL18-204ENST00000442272 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
KLHL18-204ENST00000442272 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
KLHL18-204ENST00000442272 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
KLHL18-204ENST00000442272 CEP164Q9UPV0 1460 aa23.01■■□□□ 1.27
KLHL18-204ENST00000442272 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
KLHL18-204ENST00000442272 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
KLHL18-204ENST00000442272 CUX1P39880 1505 aa22.96■■□□□ 1.27
KLHL18-204ENST00000442272 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
KLHL18-204ENST00000442272 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.26
KLHL18-204ENST00000442272 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
KLHL18-204ENST00000442272 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
KLHL18-204ENST00000442272 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
KLHL18-204ENST00000442272 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
KLHL18-204ENST00000442272 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
KLHL18-204ENST00000442272 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
KLHL18-204ENST00000442272 FGD5Q6ZNL6 1462 aa22.78■■□□□ 1.24
KLHL18-204ENST00000442272 SOGA1O94964 1423 aa22.73■■□□□ 1.23
KLHL18-204ENST00000442272 POLA1P09884 1462 aaPredicted RBP22.72■■□□□ 1.23
KLHL18-204ENST00000442272 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
KLHL18-204ENST00000442272 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
KLHL18-204ENST00000442272 WDR62O43379 1518 aa22.69■■□□□ 1.22
KLHL18-204ENST00000442272 RUSC2Q8N2Y8 1516 aa22.69■■□□□ 1.22
KLHL18-204ENST00000442272 CUX2O14529 1486 aa22.6■■□□□ 1.21
KLHL18-204ENST00000442272 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
KLHL18-204ENST00000442272 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
KLHL18-204ENST00000442272 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
KLHL18-204ENST00000442272 TARBP1Q13395 1621 aaKnown RBP22.51■■□□□ 1.19
KLHL18-204ENST00000442272 LOC105371045A0A1W2PR82 267 aa22.5■■□□□ 1.19
KLHL18-204ENST00000442272 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
KLHL18-204ENST00000442272 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
KLHL18-204ENST00000442272 IFT140Q96RY7 1462 aa22.46■■□□□ 1.19
KLHL18-204ENST00000442272 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
KLHL18-204ENST00000442272 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.187e-6■■□□□ 12.2
KLHL18-204ENST00000442272 EEA1Q15075 1411 aa22.44■■□□□ 1.18
KLHL18-204ENST00000442272 WDR97A6NE52 1622 aa22.43■■□□□ 1.18
KLHL18-204ENST00000442272 IGF1RP08069 1367 aa22.39■■□□□ 1.17
KLHL18-204ENST00000442272 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
KLHL18-204ENST00000442272 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
KLHL18-204ENST00000442272 EIF4G3O43432 1585 aaKnown RBP22.29■■□□□ 1.16
KLHL18-204ENST00000442272 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
KLHL18-204ENST00000442272 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
KLHL18-204ENST00000442272 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
KLHL18-204ENST00000442272 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
KLHL18-204ENST00000442272 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
KLHL18-204ENST00000442272 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
KLHL18-204ENST00000442272 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
KLHL18-204ENST00000442272 KIF21BO75037 1637 aa22.18■■□□□ 1.14
KLHL18-204ENST00000442272 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
KLHL18-204ENST00000442272 SNAPC4Q5SXM2 1469 aa22.17■■□□□ 1.14
KLHL18-204ENST00000442272 CUL7Q14999 1698 aa22.12■■□□□ 1.13
KLHL18-204ENST00000442272 FBLN2P98095 1184 aa22.12■■□□□ 1.13
KLHL18-204ENST00000442272 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
KLHL18-204ENST00000442272 RANGAP1P46060 587 aaPredicted RBP22.09■■□□□ 1.13
KLHL18-204ENST00000442272 ADAMTS12P58397 1594 aa22.09■■□□□ 1.13
KLHL18-204ENST00000442272 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
KLHL18-204ENST00000442272 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
KLHL18-204ENST00000442272 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
KLHL18-204ENST00000442272 SYNJ2O15056 1496 aa22.01■■□□□ 1.11
KLHL18-204ENST00000442272 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
KLHL18-204ENST00000442272 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms