RNA–Protein interactions for RNA: ENST00000441869.5

MDK-207, Transcript of midkine, humanhuman

TSL 3

Gene MDK, Length 540 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDK-207ENST00000441869 NISCHQ9Y2I1 1504 aa54.88■■■■■ 6.38
MDK-207ENST00000441869 CCDC180Q9P1Z9 1646 aa49.21■■■■■ 5.47
MDK-207ENST00000441869 ABCC9O60706 1549 aa48.83■■■■■ 5.41
MDK-207ENST00000441869 RB1CC1Q8TDY2 1594 aa46.65■■■■■ 5.06
MDK-207ENST00000441869 NACADO15069 1562 aa46.39■■■■■ 5.02
MDK-207ENST00000441869 DCAF8L2P0C7V8 631 aa46.21■■■■■ 4.99
MDK-207ENST00000441869 MYO15BQ96JP2 1530 aa45.79■■■■■ 4.92
MDK-207ENST00000441869 UNC13AQ9UPW8 1703 aa45.74■■■■■ 4.91
MDK-207ENST00000441869 ZCCHC6Q5VYS8 1495 aaKnown RBP45.55■■■■■ 4.88
MDK-207ENST00000441869 PABPN1Q86U42 306 aaKnown RBP eCLIP45.48■■■■■ 4.87
MDK-207ENST00000441869 DNAJC5BQ9UF47 199 aa45.45■■■■■ 4.87
MDK-207ENST00000441869 DCAF1Q9Y4B6 1507 aa45.33■■■■■ 4.85
MDK-207ENST00000441869 BICRAQ9NZM4 1560 aa45.26■■■■■ 4.84
MDK-207ENST00000441869 SCRIBQ14160 1630 aa44.86■■■■■ 4.77
MDK-207ENST00000441869 SHROOM4Q9ULL8 1493 aa44.64■■■■■ 4.74
MDK-207ENST00000441869 CC2D2AQ9P2K1 1620 aa44.17■■■■■ 4.66
MDK-207ENST00000441869 EIF4G1Q04637 1599 aaKnown RBP44.13■■■■■ 4.65
MDK-207ENST00000441869 CECR2Q9BXF3 1484 aa43.95■■■■■ 4.63
MDK-207ENST00000441869 SMARCA4P51532 1647 aa42.81■■■■■ 4.44
MDK-207ENST00000441869 NCAPD3P42695 1498 aa42.75■■■■■ 4.43
MDK-207ENST00000441869 ATAD2BQ9ULI0 1458 aa42.69■■■■■ 4.42
MDK-207ENST00000441869 SMARCA2P51531 1590 aa42.64■■■■■ 4.42
MDK-207ENST00000441869 BAZ1AQ9NRL2 1556 aaPredicted RBP42.61■■■■■ 4.41
MDK-207ENST00000441869 HMGXB3Q12766 1538 aa42.52■■■■■ 4.4
MDK-207ENST00000441869 PEG3Q9GZU2 1588 aa42.34■■■■■ 4.37
MDK-207ENST00000441869 BAZ1BQ9UIG0 1483 aaKnown RBP42.33■■■■■ 4.37
MDK-207ENST00000441869 MROH2BQ7Z745 1585 aa42.3■■■■■ 4.36
MDK-207ENST00000441869 ERCC6Q03468 1493 aa42.17■■■■■ 4.34
MDK-207ENST00000441869 NESP48681 1621 aa42.04■■■■■ 4.32
MDK-207ENST00000441869 CUX2O14529 1486 aa41.94■■■■■ 4.3
MDK-207ENST00000441869 WIZO95785 1651 aa41.89■■■■■ 4.3
MDK-207ENST00000441869 LAMC3Q9Y6N6 1575 aa41.82■■■■■ 4.29
MDK-207ENST00000441869 KIF21AQ7Z4S6 1674 aa41.63■■■■■ 4.25
MDK-207ENST00000441869 THOC2Q8NI27 1593 aaKnown RBP41.59■■■■■ 4.25
MDK-207ENST00000441869 PDS5BQ9NTI5 1447 aa41.52■■■■■ 4.24
MDK-207ENST00000441869 DNAJC5Q9H3Z4 198 aa41.51■■■■■ 4.24
MDK-207ENST00000441869 RSF1Q96T23 1441 aaPredicted RBP41.5■■■■■ 4.23
MDK-207ENST00000441869 CADPSQ9ULU8 1353 aa41.48■■■■■ 4.23
MDK-207ENST00000441869 TOP2AP11388 1531 aaKnown RBP41.33■■■■■ 4.21
MDK-207ENST00000441869 MRC2Q9UBG0 1479 aa41.16■■■■■ 4.18
MDK-207ENST00000441869 CFTRP13569 1480 aa41.08■■■■■ 4.17
MDK-207ENST00000441869 CEP164Q9UPV0 1460 aa41.08■■■■■ 4.17
MDK-207ENST00000441869 WDR62O43379 1518 aa41.06■■■■■ 4.16
MDK-207ENST00000441869 FANCD2Q9BXW9 1451 aa41.04■■■■■ 4.16
MDK-207ENST00000441869 PRDM2Q13029 1718 aa40.93■■■■■ 4.14
MDK-207ENST00000441869 CCDC88BA6NC98 1476 aa40.83■■■■■ 4.13
MDK-207ENST00000441869 URB2Q14146 1524 aaKnown RBP40.68■■■■■ 4.1
MDK-207ENST00000441869 TOPBP1Q92547 1522 aa40.32■■■■■ 4.04
MDK-207ENST00000441869 ABCC8Q09428 1581 aa40.23■■■■■ 4.03
MDK-207ENST00000441869 IFT140Q96RY7 1462 aa40.22■■■■■ 4.03
MDK-207ENST00000441869 DNMBPQ6XZF7 1577 aa40.22■■■■■ 4.03
MDK-207ENST00000441869 ZNF608Q9ULD9 1512 aaPredicted RBP40.13■■■■■ 4.01
MDK-207ENST00000441869 OSCARQ8IYS5 282 aa40.06■■■■■ 4
MDK-207ENST00000441869 EIF4G3O43432 1585 aaKnown RBP39.99■■■■□ 3.99
MDK-207ENST00000441869 TARBP1Q13395 1621 aaKnown RBP39.96■■■■□ 3.99
MDK-207ENST00000441869 SUPT5HO00267 1087 aaKnown RBP39.94■■■■□ 3.98
MDK-207ENST00000441869 POLA1P09884 1462 aaPredicted RBP39.91■■■■□ 3.98
MDK-207ENST00000441869 TRIM41Q8WV44 630 aa39.89■■■■□ 3.98
MDK-207ENST00000441869 AQRO60306 1485 aaKnown RBP eCLIP39.8■■■■□ 3.962e-8■■□□□ 14.3
MDK-207ENST00000441869 RAD54L2Q9Y4B4 1467 aa39.76■■■■□ 3.96
MDK-207ENST00000441869 CUX1P39880 1505 aa39.74■■■■□ 3.95
MDK-207ENST00000441869 SOGA1O94964 1423 aa39.73■■■■□ 3.95
MDK-207ENST00000441869 CHD1O14646 1710 aa39.72■■■■□ 3.95
MDK-207ENST00000441869 FGD5Q6ZNL6 1462 aa39.72■■■■□ 3.95
MDK-207ENST00000441869 RIMBP3CA6NJZ7 1639 aa39.6■■■■□ 3.93
MDK-207ENST00000441869 RIMBP3BA6NNM3 1639 aa39.6■■■■□ 3.93
MDK-207ENST00000441869 RIMBP3Q9UFD9 1639 aa39.6■■■■□ 3.93
MDK-207ENST00000441869 TDRD9Q8NDG6 1382 aaKnown RBP39.59■■■■□ 3.93
MDK-207ENST00000441869 WDR97A6NE52 1622 aa39.58■■■■□ 3.93
MDK-207ENST00000441869 FBLN2P98095 1184 aa39.5■■■■□ 3.91
MDK-207ENST00000441869 ARHGEF11O15085 1522 aa39.45■■■■□ 3.91
MDK-207ENST00000441869 SNAPC4Q5SXM2 1469 aa39.43■■■■□ 3.9
MDK-207ENST00000441869 PBRM1Q86U86 1689 aa39.36■■■■□ 3.89
MDK-207ENST00000441869 GRIN2BQ13224 1484 aa39.35■■■■□ 3.89
MDK-207ENST00000441869 MAGI1Q96QZ7 1491 aaPredicted RBP39.33■■■■□ 3.89
MDK-207ENST00000441869 GAPVD1Q14C86 1478 aa39.27■■■■□ 3.88
MDK-207ENST00000441869 ABCA10Q8WWZ4 1543 aa39.27■■■■□ 3.88
MDK-207ENST00000441869 BIVM-ERCC5R4GMW8 1640 aa39.25■■■■□ 3.87
MDK-207ENST00000441869 CHMP7Q8WUX9 453 aaPredicted RBP39.24■■■■□ 3.87
MDK-207ENST00000441869 ABCA5Q8WWZ7 1642 aa39.24■■■■□ 3.87
MDK-207ENST00000441869 TOP2BQ02880 1626 aa39.22■■■■□ 3.87
MDK-207ENST00000441869 SYNJ1O43426 1573 aa39.19■■■■□ 3.86
MDK-207ENST00000441869 SYNJ2O15056 1496 aa39.18■■■■□ 3.86
MDK-207ENST00000441869 WRNQ14191 1432 aaPredicted RBP eCLIP39.17■■■■□ 3.86
MDK-207ENST00000441869 CLASP1Q7Z460 1538 aa39.14■■■■□ 3.86
MDK-207ENST00000441869 CYB5RLQ6IPT4 315 aa39.12■■■■□ 3.85
MDK-207ENST00000441869 ARAP1Q96P48 1450 aa39.07■■■■□ 3.85
MDK-207ENST00000441869 ADAMTS12P58397 1594 aa38.91■■■■□ 3.82
MDK-207ENST00000441869 GRIN2AQ12879 1464 aa38.86■■■■□ 3.81
MDK-207ENST00000441869 ERICH3Q5RHP9 1530 aa38.8■■■■□ 3.8
MDK-207ENST00000441869 FHAD1B1AJZ9 1412 aa38.76■■■■□ 3.8
MDK-207ENST00000441869 CEP170Q5SW79 1584 aa38.73■■■■□ 3.79
MDK-207ENST00000441869 NUP160Q12769 1436 aa38.68■■■■□ 3.78
MDK-207ENST00000441869 TRHP20396 242 aaPredicted RBP38.61■■■■□ 3.77
MDK-207ENST00000441869 ERCC6L2Q5T890 1561 aa38.57■■■■□ 3.77
MDK-207ENST00000441869 SHROOM2Q13796 1616 aa38.54■■■■□ 3.76
MDK-207ENST00000441869 KIF27Q86VH2 1401 aa38.41■■■■□ 3.74
MDK-207ENST00000441869 CUL7Q14999 1698 aa38.36■■■■□ 3.73
MDK-207ENST00000441869 RUSC2Q8N2Y8 1516 aa38.36■■■■□ 3.73
MDK-207ENST00000441869 IGF1RP08069 1367 aa38.31■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms