RNA–Protein interactions for RNA: ENST00000441759.1

AP000959.1-201, humanhuman

TSL 3 BASIC

Gene AP000959.1, Length 977 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000959.1-201ENST00000441759 AEBP2Q6ZN18 517 aaPredicted RBP32.69■■■□□ 2.82
AP000959.1-201ENST00000441759 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
AP000959.1-201ENST00000441759 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
AP000959.1-201ENST00000441759 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
AP000959.1-201ENST00000441759 ABCC9O60706 1549 aa27.97■■■□□ 2.07
AP000959.1-201ENST00000441759 SENP3Q9H4L4 574 aaPredicted RBP27.89■■■□□ 2.06
AP000959.1-201ENST00000441759 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
AP000959.1-201ENST00000441759 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
AP000959.1-201ENST00000441759 NACADO15069 1562 aa26.58■■□□□ 1.85
AP000959.1-201ENST00000441759 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
AP000959.1-201ENST00000441759 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
AP000959.1-201ENST00000441759 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
AP000959.1-201ENST00000441759 FOXD1Q16676 465 aa26.14■■□□□ 1.78
AP000959.1-201ENST00000441759 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
AP000959.1-201ENST00000441759 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
AP000959.1-201ENST00000441759 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
AP000959.1-201ENST00000441759 BICRAQ9NZM4 1560 aa25.99■■□□□ 1.75
AP000959.1-201ENST00000441759 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
AP000959.1-201ENST00000441759 SCRIBQ14160 1630 aa25.67■■□□□ 1.7
AP000959.1-201ENST00000441759 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
AP000959.1-201ENST00000441759 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
AP000959.1-201ENST00000441759 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
AP000959.1-201ENST00000441759 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
AP000959.1-201ENST00000441759 POTEDQ86YR6 584 aa25.18■■□□□ 1.62
AP000959.1-201ENST00000441759 MSH5O43196 834 aa24.62■■□□□ 1.53
AP000959.1-201ENST00000441759 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
AP000959.1-201ENST00000441759 NCAPD3P42695 1498 aa24.5■■□□□ 1.51
AP000959.1-201ENST00000441759 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
AP000959.1-201ENST00000441759 SMARCA2P51531 1590 aa24.42■■□□□ 1.5
AP000959.1-201ENST00000441759 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
AP000959.1-201ENST00000441759 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
AP000959.1-201ENST00000441759 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
AP000959.1-201ENST00000441759 PIAS4Q8N2W9 510 aaPredicted RBP24.23■■□□□ 1.47
AP000959.1-201ENST00000441759 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
AP000959.1-201ENST00000441759 MROH2BQ7Z745 1585 aa24.2■■□□□ 1.47
AP000959.1-201ENST00000441759 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
AP000959.1-201ENST00000441759 CUX2O14529 1486 aa24.1■■□□□ 1.45
AP000959.1-201ENST00000441759 NESP48681 1621 aa24.09■■□□□ 1.45
AP000959.1-201ENST00000441759 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
AP000959.1-201ENST00000441759 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
AP000959.1-201ENST00000441759 WIZO95785 1651 aa23.95■■□□□ 1.43
AP000959.1-201ENST00000441759 PLPPR3Q6T4P5 718 aa23.95■■□□□ 1.42
AP000959.1-201ENST00000441759 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
AP000959.1-201ENST00000441759 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.41
AP000959.1-201ENST00000441759 ADRA2BP18089 450 aa23.86■■□□□ 1.41
AP000959.1-201ENST00000441759 DNAJC5Q9H3Z4 198 aa23.85■■□□□ 1.41
AP000959.1-201ENST00000441759 PDS5BQ9NTI5 1447 aa23.76■■□□□ 1.39
AP000959.1-201ENST00000441759 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
AP000959.1-201ENST00000441759 RSF1Q96T23 1441 aaPredicted RBP23.71■■□□□ 1.39
AP000959.1-201ENST00000441759 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
AP000959.1-201ENST00000441759 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
AP000959.1-201ENST00000441759 WDR62O43379 1518 aa23.57■■□□□ 1.36
AP000959.1-201ENST00000441759 CFTRP13569 1480 aa23.53■■□□□ 1.36
AP000959.1-201ENST00000441759 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
AP000959.1-201ENST00000441759 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
AP000959.1-201ENST00000441759 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
AP000959.1-201ENST00000441759 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
AP000959.1-201ENST00000441759 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
AP000959.1-201ENST00000441759 TOPBP1Q92547 1522 aa23.09■■□□□ 1.29
AP000959.1-201ENST00000441759 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
AP000959.1-201ENST00000441759 IFT140Q96RY7 1462 aa23.04■■□□□ 1.28
AP000959.1-201ENST00000441759 ABCC8Q09428 1581 aa23.02■■□□□ 1.28
AP000959.1-201ENST00000441759 ZNF608Q9ULD9 1512 aaPredicted RBP22.99■■□□□ 1.27
AP000959.1-201ENST00000441759 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
AP000959.1-201ENST00000441759 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
AP000959.1-201ENST00000441759 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
AP000959.1-201ENST00000441759 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
AP000959.1-201ENST00000441759 TRIM41Q8WV44 630 aa22.83■■□□□ 1.25
AP000959.1-201ENST00000441759 CHD1O14646 1710 aa22.78■■□□□ 1.24
AP000959.1-201ENST00000441759 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.23
AP000959.1-201ENST00000441759 RIMBP3CA6NJZ7 1639 aa22.75■■□□□ 1.23
AP000959.1-201ENST00000441759 RIMBP3BA6NNM3 1639 aa22.75■■□□□ 1.23
AP000959.1-201ENST00000441759 RIMBP3Q9UFD9 1639 aa22.75■■□□□ 1.23
AP000959.1-201ENST00000441759 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
AP000959.1-201ENST00000441759 CUX1P39880 1505 aa22.74■■□□□ 1.23
AP000959.1-201ENST00000441759 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
AP000959.1-201ENST00000441759 WDR97A6NE52 1622 aa22.71■■□□□ 1.23
AP000959.1-201ENST00000441759 SOGA1O94964 1423 aa22.69■■□□□ 1.22
AP000959.1-201ENST00000441759 SUPT5HO00267 1087 aaKnown RBP22.65■■□□□ 1.22
AP000959.1-201ENST00000441759 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
AP000959.1-201ENST00000441759 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
AP000959.1-201ENST00000441759 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
AP000959.1-201ENST00000441759 PBRM1Q86U86 1689 aa22.56■■□□□ 1.2
AP000959.1-201ENST00000441759 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
AP000959.1-201ENST00000441759 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
AP000959.1-201ENST00000441759 FBLN2P98095 1184 aa22.52■■□□□ 1.2
AP000959.1-201ENST00000441759 ABCA5Q8WWZ7 1642 aa22.5■■□□□ 1.19
AP000959.1-201ENST00000441759 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
AP000959.1-201ENST00000441759 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
AP000959.1-201ENST00000441759 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
AP000959.1-201ENST00000441759 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
AP000959.1-201ENST00000441759 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
AP000959.1-201ENST00000441759 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
AP000959.1-201ENST00000441759 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
AP000959.1-201ENST00000441759 ARAP1Q96P48 1450 aa22.43■■□□□ 1.18
AP000959.1-201ENST00000441759 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
AP000959.1-201ENST00000441759 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
AP000959.1-201ENST00000441759 CYB5RLQ6IPT4 315 aa22.35■■□□□ 1.17
AP000959.1-201ENST00000441759 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
AP000959.1-201ENST00000441759 GRIN2AQ12879 1464 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms