RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
MCF2L-217ENST00000441756 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
MCF2L-217ENST00000441756 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
MCF2L-217ENST00000441756 ABCC9O60706 1549 aa30.91■■■□□ 2.54
MCF2L-217ENST00000441756 DCAF1Q9Y4B6 1507 aa30.63■■■□□ 2.49
MCF2L-217ENST00000441756 MYO15BQ96JP2 1530 aa30.46■■■□□ 2.47
MCF2L-217ENST00000441756 DCAF8L2P0C7V8 631 aa30.44■■■□□ 2.46
MCF2L-217ENST00000441756 NACADO15069 1562 aa30.36■■■□□ 2.45
MCF2L-217ENST00000441756 RB1CC1Q8TDY2 1594 aa30.2■■■□□ 2.42
MCF2L-217ENST00000441756 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
MCF2L-217ENST00000441756 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
MCF2L-217ENST00000441756 UNC13AQ9UPW8 1703 aa29.43■■■□□ 2.3
MCF2L-217ENST00000441756 BICRAQ9NZM4 1560 aa29.15■■■□□ 2.26
MCF2L-217ENST00000441756 PABPN1Q86U42 306 aaKnown RBP eCLIP28.96■■■□□ 2.23
MCF2L-217ENST00000441756 BAZ1AQ9NRL2 1556 aaPredicted RBP28.61■■■□□ 2.17
MCF2L-217ENST00000441756 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
MCF2L-217ENST00000441756 SMARCA4P51532 1647 aa28.48■■■□□ 2.15
MCF2L-217ENST00000441756 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
MCF2L-217ENST00000441756 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
MCF2L-217ENST00000441756 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
MCF2L-217ENST00000441756 SUPT5HO00267 1087 aaKnown RBP28.32■■■□□ 2.12
MCF2L-217ENST00000441756 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
MCF2L-217ENST00000441756 WIZO95785 1651 aa28.17■■■□□ 2.1
MCF2L-217ENST00000441756 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
MCF2L-217ENST00000441756 ATAD2BQ9ULI0 1458 aa28.08■■■□□ 2.09
MCF2L-217ENST00000441756 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
MCF2L-217ENST00000441756 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
MCF2L-217ENST00000441756 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
MCF2L-217ENST00000441756 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
MCF2L-217ENST00000441756 NCAPD3P42695 1498 aa27.95■■■□□ 2.06
MCF2L-217ENST00000441756 CCDC88BA6NC98 1476 aa27.59■■■□□ 2.01
MCF2L-217ENST00000441756 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
MCF2L-217ENST00000441756 CFTRP13569 1480 aa27.2■■□□□ 1.95
MCF2L-217ENST00000441756 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
MCF2L-217ENST00000441756 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
MCF2L-217ENST00000441756 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
MCF2L-217ENST00000441756 NESP48681 1621 aa26.97■■□□□ 1.91
MCF2L-217ENST00000441756 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
MCF2L-217ENST00000441756 PDS5BQ9NTI5 1447 aa26.91■■□□□ 1.9
MCF2L-217ENST00000441756 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
MCF2L-217ENST00000441756 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
MCF2L-217ENST00000441756 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
MCF2L-217ENST00000441756 CEP164Q9UPV0 1460 aa26.81■■□□□ 1.88
MCF2L-217ENST00000441756 TRIM41Q8WV44 630 aa26.75■■□□□ 1.87
MCF2L-217ENST00000441756 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
MCF2L-217ENST00000441756 TOP2BQ02880 1626 aa26.68■■□□□ 1.86
MCF2L-217ENST00000441756 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
MCF2L-217ENST00000441756 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
MCF2L-217ENST00000441756 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
MCF2L-217ENST00000441756 CUX1P39880 1505 aa26.64■■□□□ 1.85
MCF2L-217ENST00000441756 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
MCF2L-217ENST00000441756 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
MCF2L-217ENST00000441756 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
MCF2L-217ENST00000441756 URB2Q14146 1524 aaKnown RBP26.53■■□□□ 1.84
MCF2L-217ENST00000441756 WDR62O43379 1518 aa26.45■■□□□ 1.83
MCF2L-217ENST00000441756 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
MCF2L-217ENST00000441756 FGD5Q6ZNL6 1462 aa26.43■■□□□ 1.82
MCF2L-217ENST00000441756 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
MCF2L-217ENST00000441756 EEA1Q15075 1411 aa26.33■■□□□ 1.81
MCF2L-217ENST00000441756 SOGA1O94964 1423 aa26.28■■□□□ 1.8
MCF2L-217ENST00000441756 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
MCF2L-217ENST00000441756 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
MCF2L-217ENST00000441756 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
MCF2L-217ENST00000441756 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
MCF2L-217ENST00000441756 WDR97A6NE52 1622 aa26.2■■□□□ 1.78
MCF2L-217ENST00000441756 CUX2O14529 1486 aa26.18■■□□□ 1.78
MCF2L-217ENST00000441756 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
MCF2L-217ENST00000441756 FAM9AQ8IZU1 332 aaPredicted RBP26.12■■□□□ 1.77
MCF2L-217ENST00000441756 RUSC2Q8N2Y8 1516 aa26.1■■□□□ 1.77
MCF2L-217ENST00000441756 CSRNP3Q8WYN3 585 aa26.06■■□□□ 1.76
MCF2L-217ENST00000441756 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
MCF2L-217ENST00000441756 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
MCF2L-217ENST00000441756 TDRD9Q8NDG6 1382 aaKnown RBP25.98■■□□□ 1.75
MCF2L-217ENST00000441756 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
MCF2L-217ENST00000441756 KIF21BO75037 1637 aa25.96■■□□□ 1.75
MCF2L-217ENST00000441756 EIF4G3O43432 1585 aaKnown RBP25.94■■□□□ 1.74
MCF2L-217ENST00000441756 CUL7Q14999 1698 aa25.93■■□□□ 1.74
MCF2L-217ENST00000441756 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
MCF2L-217ENST00000441756 ZNF608Q9ULD9 1512 aaPredicted RBP25.92■■□□□ 1.74
MCF2L-217ENST00000441756 IGF1RP08069 1367 aa25.92■■□□□ 1.74
MCF2L-217ENST00000441756 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
MCF2L-217ENST00000441756 AQRO60306 1485 aaKnown RBP eCLIP25.89■■□□□ 1.73
MCF2L-217ENST00000441756 GOLGA3Q08378 1498 aa25.88■■□□□ 1.73
MCF2L-217ENST00000441756 PRXQ9BXM0 1461 aa25.88■■□□□ 1.73
MCF2L-217ENST00000441756 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
MCF2L-217ENST00000441756 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
MCF2L-217ENST00000441756 MAGI1Q96QZ7 1491 aaPredicted RBP25.77■■□□□ 1.72
MCF2L-217ENST00000441756 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
MCF2L-217ENST00000441756 FHAD1B1AJZ9 1412 aa25.75■■□□□ 1.71
MCF2L-217ENST00000441756 LOC105371045A0A1W2PR82 267 aa25.75■■□□□ 1.71
MCF2L-217ENST00000441756 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
MCF2L-217ENST00000441756 UBTFP17480 764 aaKnown RBP25.68■■□□□ 1.7
MCF2L-217ENST00000441756 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
MCF2L-217ENST00000441756 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
MCF2L-217ENST00000441756 SYNJ2O15056 1496 aa25.64■■□□□ 1.69
MCF2L-217ENST00000441756 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
MCF2L-217ENST00000441756 CTTNBP2Q8WZ74 1663 aa25.54■■□□□ 1.68
MCF2L-217ENST00000441756 CHMP7Q8WUX9 453 aaPredicted RBP25.53■■□□□ 1.68
MCF2L-217ENST00000441756 CEP162Q5TB80 1403 aa25.48■■□□□ 1.67
MCF2L-217ENST00000441756 FBLN2P98095 1184 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms