RNA–Protein interactions for RNA: ENST00000441616.5

TRIM2-204, Transcript of tripartite motif containing 2, humanhuman

TSL 3

Gene TRIM2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-204ENST00000441616 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
TRIM2-204ENST00000441616 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
TRIM2-204ENST00000441616 ABCC9O60706 1549 aa12.21□□□□□ -0.46
TRIM2-204ENST00000441616 DCAF8L2P0C7V8 631 aa11.97□□□□□ -0.49
TRIM2-204ENST00000441616 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
TRIM2-204ENST00000441616 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
TRIM2-204ENST00000441616 NACADO15069 1562 aa11.84□□□□□ -0.51
TRIM2-204ENST00000441616 DCAF1Q9Y4B6 1507 aa11.8□□□□□ -0.52
TRIM2-204ENST00000441616 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
TRIM2-204ENST00000441616 SCRIBQ14160 1630 aa11.56□□□□□ -0.56
TRIM2-204ENST00000441616 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
TRIM2-204ENST00000441616 PABPN1Q86U42 306 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM2-204ENST00000441616 SHROOM4Q9ULL8 1493 aa11.43□□□□□ -0.58
TRIM2-204ENST00000441616 BICRAQ9NZM4 1560 aa11.35□□□□□ -0.59
TRIM2-204ENST00000441616 EIF4G1Q04637 1599 aaKnown RBP11.11□□□□□ -0.63
TRIM2-204ENST00000441616 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
TRIM2-204ENST00000441616 CECR2Q9BXF3 1484 aa11.04□□□□□ -0.64
TRIM2-204ENST00000441616 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
TRIM2-204ENST00000441616 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
TRIM2-204ENST00000441616 SMARCA2P51531 1590 aa10.97□□□□□ -0.65
TRIM2-204ENST00000441616 MROH2BQ7Z745 1585 aa10.96□□□□□ -0.65
TRIM2-204ENST00000441616 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
TRIM2-204ENST00000441616 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
TRIM2-204ENST00000441616 BAZ1BQ9UIG0 1483 aaKnown RBP10.91□□□□□ -0.66
TRIM2-204ENST00000441616 RSF1Q96T23 1441 aaPredicted RBP10.91□□□□□ -0.66
TRIM2-204ENST00000441616 PEG3Q9GZU2 1588 aa10.89□□□□□ -0.67
TRIM2-204ENST00000441616 NCAPD3P42695 1498 aa10.88□□□□□ -0.67
TRIM2-204ENST00000441616 HMGXB3Q12766 1538 aa10.88□□□□□ -0.67
TRIM2-204ENST00000441616 WIZO95785 1651 aa10.86□□□□□ -0.67
TRIM2-204ENST00000441616 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
TRIM2-204ENST00000441616 TOP2AP11388 1531 aaKnown RBP10.8□□□□□ -0.68
TRIM2-204ENST00000441616 CCDC88BA6NC98 1476 aa10.64□□□□□ -0.71
TRIM2-204ENST00000441616 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
TRIM2-204ENST00000441616 CADPSQ9ULU8 1353 aa10.61□□□□□ -0.71
TRIM2-204ENST00000441616 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
TRIM2-204ENST00000441616 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
TRIM2-204ENST00000441616 NESP48681 1621 aa10.56□□□□□ -0.72
TRIM2-204ENST00000441616 CFTRP13569 1480 aa10.55□□□□□ -0.72
TRIM2-204ENST00000441616 FANCD2Q9BXW9 1451 aa10.5□□□□□ -0.73
TRIM2-204ENST00000441616 CEP164Q9UPV0 1460 aa10.5□□□□□ -0.73
TRIM2-204ENST00000441616 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
TRIM2-204ENST00000441616 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.74
TRIM2-204ENST00000441616 MRC2Q9UBG0 1479 aa10.43□□□□□ -0.74
TRIM2-204ENST00000441616 ABCC8Q09428 1581 aa10.4□□□□□ -0.74
TRIM2-204ENST00000441616 THOC2Q8NI27 1593 aaKnown RBP10.37□□□□□ -0.75
TRIM2-204ENST00000441616 WDR62O43379 1518 aa10.36□□□□□ -0.75
TRIM2-204ENST00000441616 CUX2O14529 1486 aa10.36□□□□□ -0.75
TRIM2-204ENST00000441616 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
TRIM2-204ENST00000441616 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
TRIM2-204ENST00000441616 URB2Q14146 1524 aaKnown RBP10.33□□□□□ -0.76
TRIM2-204ENST00000441616 TOPBP1Q92547 1522 aa10.33□□□□□ -0.76
TRIM2-204ENST00000441616 CUX1P39880 1505 aa10.28□□□□□ -0.76
TRIM2-204ENST00000441616 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
TRIM2-204ENST00000441616 TRIM41Q8WV44 630 aa10.27□□□□□ -0.77
TRIM2-204ENST00000441616 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
TRIM2-204ENST00000441616 IFT140Q96RY7 1462 aa10.26□□□□□ -0.77
TRIM2-204ENST00000441616 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
TRIM2-204ENST00000441616 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
TRIM2-204ENST00000441616 SOGA1O94964 1423 aa10.24□□□□□ -0.77
TRIM2-204ENST00000441616 POLA1P09884 1462 aaPredicted RBP10.24□□□□□ -0.77
TRIM2-204ENST00000441616 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
TRIM2-204ENST00000441616 WDR97A6NE52 1622 aa10.17□□□□□ -0.78
TRIM2-204ENST00000441616 TARBP1Q13395 1621 aaKnown RBP10.16□□□□□ -0.78
TRIM2-204ENST00000441616 ABCA10Q8WWZ4 1543 aa10.16□□□□□ -0.78
TRIM2-204ENST00000441616 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
TRIM2-204ENST00000441616 CHIC1Q5VXU3 224 aa10.15□□□□□ -0.78
TRIM2-204ENST00000441616 KIF27Q86VH2 1401 aa10.15□□□□□ -0.79
TRIM2-204ENST00000441616 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
TRIM2-204ENST00000441616 ZNF608Q9ULD9 1512 aaPredicted RBP10.13□□□□□ -0.79
TRIM2-204ENST00000441616 GAPVD1Q14C86 1478 aa10.13□□□□□ -0.79
TRIM2-204ENST00000441616 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRIM2-204ENST00000441616 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
TRIM2-204ENST00000441616 ABCA5Q8WWZ7 1642 aa10.09□□□□□ -0.79
TRIM2-204ENST00000441616 FBLN2P98095 1184 aa10.08□□□□□ -0.8
TRIM2-204ENST00000441616 PBRM1Q86U86 1689 aa10.08□□□□□ -0.8
TRIM2-204ENST00000441616 EEA1Q15075 1411 aa10.07□□□□□ -0.8
TRIM2-204ENST00000441616 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
TRIM2-204ENST00000441616 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
TRIM2-204ENST00000441616 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
TRIM2-204ENST00000441616 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
TRIM2-204ENST00000441616 FAM9AQ8IZU1 332 aaPredicted RBP10.04□□□□□ -0.8
TRIM2-204ENST00000441616 CUL7Q14999 1698 aa10.03□□□□□ -0.8
TRIM2-204ENST00000441616 SYNJ2O15056 1496 aa10.03□□□□□ -0.8
TRIM2-204ENST00000441616 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.81
TRIM2-204ENST00000441616 ADAMTS12P58397 1594 aa10.01□□□□□ -0.81
TRIM2-204ENST00000441616 CSRNP3Q8WYN3 585 aa10□□□□□ -0.81
TRIM2-204ENST00000441616 IGF1RP08069 1367 aa9.99□□□□□ -0.81
TRIM2-204ENST00000441616 CARMIL1Q5VZK9 1371 aa9.99□□□□□ -0.81
TRIM2-204ENST00000441616 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
TRIM2-204ENST00000441616 OSCARQ8IYS5 282 aa9.97□□□□□ -0.81
TRIM2-204ENST00000441616 GRIN2AQ12879 1464 aa9.97□□□□□ -0.81
TRIM2-204ENST00000441616 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
TRIM2-204ENST00000441616 CHD1O14646 1710 aa9.96□□□□□ -0.81
TRIM2-204ENST00000441616 EHMT2Q96KQ7 1210 aa9.92□□□□□ -0.82
TRIM2-204ENST00000441616 GOLGA3Q08378 1498 aa9.91□□□□□ -0.82
TRIM2-204ENST00000441616 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
TRIM2-204ENST00000441616 KIF21BO75037 1637 aa9.9□□□□□ -0.82
TRIM2-204ENST00000441616 UBTFP17480 764 aaKnown RBP9.9□□□□□ -0.82
TRIM2-204ENST00000441616 NUP160Q12769 1436 aa9.88□□□□□ -0.83
TRIM2-204ENST00000441616 CEP170Q5SW79 1584 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms