RNA–Protein interactions for RNA: ENST00000441451.1

PREB-205, Transcript of prolactin regulatory element binding, humanhuman

TSL 5

Gene PREB, Length 351 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-205ENST00000441451 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
PREB-205ENST00000441451 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
PREB-205ENST00000441451 ABCC9O60706 1549 aa18.27■□□□□ 0.51
PREB-205ENST00000441451 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
PREB-205ENST00000441451 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
PREB-205ENST00000441451 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
PREB-205ENST00000441451 NACADO15069 1562 aa17.57■□□□□ 0.4
PREB-205ENST00000441451 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
PREB-205ENST00000441451 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
PREB-205ENST00000441451 UNC13AQ9UPW8 1703 aa17.23■□□□□ 0.35
PREB-205ENST00000441451 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
PREB-205ENST00000441451 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
PREB-205ENST00000441451 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
PREB-205ENST00000441451 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
PREB-205ENST00000441451 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
PREB-205ENST00000441451 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
PREB-205ENST00000441451 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.24
PREB-205ENST00000441451 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
PREB-205ENST00000441451 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
PREB-205ENST00000441451 BAZ1AQ9NRL2 1556 aaPredicted RBP16.36■□□□□ 0.21
PREB-205ENST00000441451 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
PREB-205ENST00000441451 SMARCA2P51531 1590 aa16.24■□□□□ 0.19
PREB-205ENST00000441451 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
PREB-205ENST00000441451 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
PREB-205ENST00000441451 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
PREB-205ENST00000441451 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
PREB-205ENST00000441451 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
PREB-205ENST00000441451 WIZO95785 1651 aa16.14■□□□□ 0.17
PREB-205ENST00000441451 RSF1Q96T23 1441 aaPredicted RBP16.1■□□□□ 0.17
PREB-205ENST00000441451 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
PREB-205ENST00000441451 NESP48681 1621 aa15.83■□□□□ 0.13
PREB-205ENST00000441451 SUPT5HO00267 1087 aaKnown RBP15.81■□□□□ 0.12
PREB-205ENST00000441451 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
PREB-205ENST00000441451 ERCC6Q03468 1493 aa15.76■□□□□ 0.11
PREB-205ENST00000441451 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
PREB-205ENST00000441451 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
PREB-205ENST00000441451 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
PREB-205ENST00000441451 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
PREB-205ENST00000441451 CFTRP13569 1480 aa15.65■□□□□ 0.1
PREB-205ENST00000441451 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
PREB-205ENST00000441451 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
PREB-205ENST00000441451 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
PREB-205ENST00000441451 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
PREB-205ENST00000441451 MRC2Q9UBG0 1479 aa15.52■□□□□ 0.08
PREB-205ENST00000441451 CUX2O14529 1486 aa15.5■□□□□ 0.07
PREB-205ENST00000441451 WDR62O43379 1518 aa15.47■□□□□ 0.07
PREB-205ENST00000441451 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
PREB-205ENST00000441451 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
PREB-205ENST00000441451 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
PREB-205ENST00000441451 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
PREB-205ENST00000441451 CUX1P39880 1505 aa15.28■□□□□ 0.04
PREB-205ENST00000441451 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
PREB-205ENST00000441451 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
PREB-205ENST00000441451 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
PREB-205ENST00000441451 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
PREB-205ENST00000441451 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
PREB-205ENST00000441451 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
PREB-205ENST00000441451 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
PREB-205ENST00000441451 TOP2BQ02880 1626 aa15.17■□□□□ 0.02
PREB-205ENST00000441451 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
PREB-205ENST00000441451 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
PREB-205ENST00000441451 SOGA1O94964 1423 aa15.14■□□□□ 0.01
PREB-205ENST00000441451 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
PREB-205ENST00000441451 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
PREB-205ENST00000441451 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 03e-7■■■■■ 33.6
PREB-205ENST00000441451 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
PREB-205ENST00000441451 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
PREB-205ENST00000441451 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
PREB-205ENST00000441451 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
PREB-205ENST00000441451 GAPVD1Q14C86 1478 aa14.99□□□□□ -0.01
PREB-205ENST00000441451 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
PREB-205ENST00000441451 SNAPC4Q5SXM2 1469 aa14.97□□□□□ -0.01
PREB-205ENST00000441451 CHD1O14646 1710 aa14.94□□□□□ -0.02
PREB-205ENST00000441451 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
PREB-205ENST00000441451 FBLN2P98095 1184 aa14.9□□□□□ -0.02
PREB-205ENST00000441451 TRIM41Q8WV44 630 aa14.9□□□□□ -0.02
PREB-205ENST00000441451 ADAMTS12P58397 1594 aa14.89□□□□□ -0.03
PREB-205ENST00000441451 KIF27Q86VH2 1401 aa14.87□□□□□ -0.03
PREB-205ENST00000441451 ERICH3Q5RHP9 1530 aa14.87□□□□□ -0.03
PREB-205ENST00000441451 DNAJC5Q9H3Z4 198 aa14.86□□□□□ -0.03
PREB-205ENST00000441451 SYNJ2O15056 1496 aa14.86□□□□□ -0.03
PREB-205ENST00000441451 OSCARQ8IYS5 282 aa14.84□□□□□ -0.03
PREB-205ENST00000441451 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
PREB-205ENST00000441451 FHAD1B1AJZ9 1412 aa14.81□□□□□ -0.04
PREB-205ENST00000441451 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
PREB-205ENST00000441451 CUL7Q14999 1698 aa14.79□□□□□ -0.04
PREB-205ENST00000441451 RUSC2Q8N2Y8 1516 aa14.77□□□□□ -0.04
PREB-205ENST00000441451 IGF1RP08069 1367 aa14.75□□□□□ -0.05
PREB-205ENST00000441451 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
PREB-205ENST00000441451 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
PREB-205ENST00000441451 CEP170Q5SW79 1584 aa14.73□□□□□ -0.05
PREB-205ENST00000441451 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
PREB-205ENST00000441451 NUP160Q12769 1436 aa14.69□□□□□ -0.06
PREB-205ENST00000441451 RIMBP3CA6NJZ7 1639 aa14.67□□□□□ -0.06
PREB-205ENST00000441451 RIMBP3BA6NNM3 1639 aa14.67□□□□□ -0.06
PREB-205ENST00000441451 RIMBP3Q9UFD9 1639 aa14.67□□□□□ -0.06
PREB-205ENST00000441451 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
PREB-205ENST00000441451 FAM9AQ8IZU1 332 aaPredicted RBP14.64□□□□□ -0.07
PREB-205ENST00000441451 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
PREB-205ENST00000441451 EEA1Q15075 1411 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms