RNA–Protein interactions for RNA: ENST00000441448.6

RPF2-203, Transcript of ribosome production factor 2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF2, Length 1,531 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-203ENST00000441448 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
RPF2-203ENST00000441448 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
RPF2-203ENST00000441448 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
RPF2-203ENST00000441448 ABCC9O60706 1549 aa22.59■■□□□ 1.21
RPF2-203ENST00000441448 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
RPF2-203ENST00000441448 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
RPF2-203ENST00000441448 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
RPF2-203ENST00000441448 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
RPF2-203ENST00000441448 NACADO15069 1562 aa21.85■■□□□ 1.09
RPF2-203ENST00000441448 RB1CC1Q8TDY2 1594 aa21.81■■□□□ 1.08
RPF2-203ENST00000441448 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
RPF2-203ENST00000441448 SCRIBQ14160 1630 aa21.45■■□□□ 1.02
RPF2-203ENST00000441448 UNC13AQ9UPW8 1703 aa21.39■■□□□ 1.02
RPF2-203ENST00000441448 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
RPF2-203ENST00000441448 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
RPF2-203ENST00000441448 BICRAQ9NZM4 1560 aa21.18■□□□□ 0.98
RPF2-203ENST00000441448 CECR2Q9BXF3 1484 aa20.66■□□□□ 0.9
RPF2-203ENST00000441448 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
RPF2-203ENST00000441448 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
RPF2-203ENST00000441448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.49■□□□□ 0.87
RPF2-203ENST00000441448 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
RPF2-203ENST00000441448 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
RPF2-203ENST00000441448 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
RPF2-203ENST00000441448 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
RPF2-203ENST00000441448 WIZO95785 1651 aa20.29■□□□□ 0.84
RPF2-203ENST00000441448 ATAD2BQ9ULI0 1458 aa20.28■□□□□ 0.84
RPF2-203ENST00000441448 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
RPF2-203ENST00000441448 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
RPF2-203ENST00000441448 PEG3Q9GZU2 1588 aa20.22■□□□□ 0.83
RPF2-203ENST00000441448 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
RPF2-203ENST00000441448 BAZ1BQ9UIG0 1483 aaKnown RBP20.13■□□□□ 0.81
RPF2-203ENST00000441448 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
RPF2-203ENST00000441448 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
RPF2-203ENST00000441448 CCDC88BA6NC98 1476 aa19.83■□□□□ 0.77
RPF2-203ENST00000441448 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
RPF2-203ENST00000441448 NESP48681 1621 aa19.67■□□□□ 0.74
RPF2-203ENST00000441448 CADPSQ9ULU8 1353 aa19.62■□□□□ 0.73
RPF2-203ENST00000441448 CFTRP13569 1480 aa19.58■□□□□ 0.72
RPF2-203ENST00000441448 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
RPF2-203ENST00000441448 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
RPF2-203ENST00000441448 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
RPF2-203ENST00000441448 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
RPF2-203ENST00000441448 PDS5BQ9NTI5 1447 aa19.43■□□□□ 0.7
RPF2-203ENST00000441448 FANCD2Q9BXW9 1451 aa19.43■□□□□ 0.7
RPF2-203ENST00000441448 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
RPF2-203ENST00000441448 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
RPF2-203ENST00000441448 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
RPF2-203ENST00000441448 MRC2Q9UBG0 1479 aa19.24■□□□□ 0.67
RPF2-203ENST00000441448 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
RPF2-203ENST00000441448 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
RPF2-203ENST00000441448 CUX1P39880 1505 aa19.18■□□□□ 0.66
RPF2-203ENST00000441448 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
RPF2-203ENST00000441448 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
RPF2-203ENST00000441448 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
RPF2-203ENST00000441448 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
RPF2-203ENST00000441448 WDR62O43379 1518 aa19.15■□□□□ 0.66
RPF2-203ENST00000441448 TOP2BQ02880 1626 aa19.08■□□□□ 0.64
RPF2-203ENST00000441448 BIVM-ERCC5R4GMW8 1640 aa19.08■□□□□ 0.64
RPF2-203ENST00000441448 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
RPF2-203ENST00000441448 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
RPF2-203ENST00000441448 TRIM41Q8WV44 630 aa19.02■□□□□ 0.64
RPF2-203ENST00000441448 CUX2O14529 1486 aa18.99■□□□□ 0.63
RPF2-203ENST00000441448 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
RPF2-203ENST00000441448 SOGA1O94964 1423 aa18.95■□□□□ 0.62
RPF2-203ENST00000441448 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
RPF2-203ENST00000441448 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
RPF2-203ENST00000441448 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
RPF2-203ENST00000441448 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
RPF2-203ENST00000441448 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
RPF2-203ENST00000441448 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.61
RPF2-203ENST00000441448 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.64e-7■■■■■ 35.4
RPF2-203ENST00000441448 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
RPF2-203ENST00000441448 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.6
RPF2-203ENST00000441448 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
RPF2-203ENST00000441448 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
RPF2-203ENST00000441448 KIF27Q86VH2 1401 aa18.72■□□□□ 0.59
RPF2-203ENST00000441448 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
RPF2-203ENST00000441448 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
RPF2-203ENST00000441448 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
RPF2-203ENST00000441448 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
RPF2-203ENST00000441448 IGF1RP08069 1367 aa18.62■□□□□ 0.57
RPF2-203ENST00000441448 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
RPF2-203ENST00000441448 EEA1Q15075 1411 aa18.58■□□□□ 0.57
RPF2-203ENST00000441448 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
RPF2-203ENST00000441448 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
RPF2-203ENST00000441448 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
RPF2-203ENST00000441448 FBLN2P98095 1184 aa18.54■□□□□ 0.56
RPF2-203ENST00000441448 CARMIL1Q5VZK9 1371 aa18.53■□□□□ 0.56
RPF2-203ENST00000441448 CUL7Q14999 1698 aa18.52■□□□□ 0.56
RPF2-203ENST00000441448 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
RPF2-203ENST00000441448 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
RPF2-203ENST00000441448 CHD1O14646 1710 aa18.5■□□□□ 0.55
RPF2-203ENST00000441448 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
RPF2-203ENST00000441448 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
RPF2-203ENST00000441448 PRXQ9BXM0 1461 aa18.47■□□□□ 0.55
RPF2-203ENST00000441448 RAPGEF2Q9Y4G8 1499 aa18.44■□□□□ 0.54
RPF2-203ENST00000441448 GRIN2AQ12879 1464 aa18.44■□□□□ 0.54
RPF2-203ENST00000441448 KIF21BO75037 1637 aa18.4■□□□□ 0.54
RPF2-203ENST00000441448 FOXD1Q16676 465 aa18.37■□□□□ 0.53
RPF2-203ENST00000441448 CEP170Q5SW79 1584 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms