RNA–Protein interactions for RNA: ENST00000441364.1

CD46P1-201, Transcript of CD46 molecule pseudogene 1, humanhuman

BASIC

Gene CD46P1, Length 763 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46P1-201ENST00000441364 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
CD46P1-201ENST00000441364 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
CD46P1-201ENST00000441364 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
CD46P1-201ENST00000441364 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
CD46P1-201ENST00000441364 PHF23Q9BUL5 403 aaPredicted RBP21.64■■□□□ 1.05
CD46P1-201ENST00000441364 ABCC9O60706 1549 aa21.52■■□□□ 1.04
CD46P1-201ENST00000441364 CCDC180Q9P1Z9 1646 aa21.39■■□□□ 1.01
CD46P1-201ENST00000441364 FOXD1Q16676 465 aa20.46■□□□□ 0.87
CD46P1-201ENST00000441364 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
CD46P1-201ENST00000441364 DNAJC5BQ9UF47 199 aa20.39■□□□□ 0.85
CD46P1-201ENST00000441364 NACADO15069 1562 aa20.23■□□□□ 0.83
CD46P1-201ENST00000441364 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
CD46P1-201ENST00000441364 PABPN1Q86U42 306 aaKnown RBP eCLIP19.95■□□□□ 0.78
CD46P1-201ENST00000441364 DCAF8L2P0C7V8 631 aa19.94■□□□□ 0.78
CD46P1-201ENST00000441364 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
CD46P1-201ENST00000441364 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
CD46P1-201ENST00000441364 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
CD46P1-201ENST00000441364 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
CD46P1-201ENST00000441364 DCAF1Q9Y4B6 1507 aa19.53■□□□□ 0.72
CD46P1-201ENST00000441364 CC2D2AQ9P2K1 1620 aa19.48■□□□□ 0.71
CD46P1-201ENST00000441364 CECR2Q9BXF3 1484 aa19.41■□□□□ 0.7
CD46P1-201ENST00000441364 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
CD46P1-201ENST00000441364 MSH5O43196 834 aa19.39■□□□□ 0.69
CD46P1-201ENST00000441364 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
CD46P1-201ENST00000441364 POTEDQ86YR6 584 aa19.26■□□□□ 0.67
CD46P1-201ENST00000441364 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
CD46P1-201ENST00000441364 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
CD46P1-201ENST00000441364 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
CD46P1-201ENST00000441364 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
CD46P1-201ENST00000441364 ADRA2BP18089 450 aa18.84■□□□□ 0.61
CD46P1-201ENST00000441364 CUX2O14529 1486 aa18.68■□□□□ 0.58
CD46P1-201ENST00000441364 NCAPD3P42695 1498 aa18.65■□□□□ 0.58
CD46P1-201ENST00000441364 ERCC6Q03468 1493 aa18.58■□□□□ 0.57
CD46P1-201ENST00000441364 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
CD46P1-201ENST00000441364 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
CD46P1-201ENST00000441364 SMARCA4P51532 1647 aa18.52■□□□□ 0.55
CD46P1-201ENST00000441364 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
CD46P1-201ENST00000441364 NESP48681 1621 aa18.43■□□□□ 0.54
CD46P1-201ENST00000441364 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
CD46P1-201ENST00000441364 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
CD46P1-201ENST00000441364 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
CD46P1-201ENST00000441364 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
CD46P1-201ENST00000441364 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
CD46P1-201ENST00000441364 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
CD46P1-201ENST00000441364 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
CD46P1-201ENST00000441364 PDS5BQ9NTI5 1447 aa18.15■□□□□ 0.5
CD46P1-201ENST00000441364 CADPSQ9ULU8 1353 aa18.04■□□□□ 0.48
CD46P1-201ENST00000441364 MRC2Q9UBG0 1479 aa18.02■□□□□ 0.48
CD46P1-201ENST00000441364 WDR62O43379 1518 aa18.02■□□□□ 0.47
CD46P1-201ENST00000441364 WIZO95785 1651 aa18■□□□□ 0.47
CD46P1-201ENST00000441364 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
CD46P1-201ENST00000441364 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
CD46P1-201ENST00000441364 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
CD46P1-201ENST00000441364 CFTRP13569 1480 aa17.82■□□□□ 0.44
CD46P1-201ENST00000441364 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
CD46P1-201ENST00000441364 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
CD46P1-201ENST00000441364 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
CD46P1-201ENST00000441364 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
CD46P1-201ENST00000441364 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
CD46P1-201ENST00000441364 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
CD46P1-201ENST00000441364 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
CD46P1-201ENST00000441364 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
CD46P1-201ENST00000441364 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
CD46P1-201ENST00000441364 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
CD46P1-201ENST00000441364 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CD46P1-201ENST00000441364 TOPBP1Q92547 1522 aa17.51■□□□□ 0.39
CD46P1-201ENST00000441364 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
CD46P1-201ENST00000441364 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
CD46P1-201ENST00000441364 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
CD46P1-201ENST00000441364 CHD1O14646 1710 aa17.44■□□□□ 0.38
CD46P1-201ENST00000441364 DNMBPQ6XZF7 1577 aa17.44■□□□□ 0.38
CD46P1-201ENST00000441364 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CD46P1-201ENST00000441364 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
CD46P1-201ENST00000441364 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
CD46P1-201ENST00000441364 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
CD46P1-201ENST00000441364 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.37
CD46P1-201ENST00000441364 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
CD46P1-201ENST00000441364 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
CD46P1-201ENST00000441364 ARAP1Q96P48 1450 aa17.31■□□□□ 0.36
CD46P1-201ENST00000441364 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
CD46P1-201ENST00000441364 FBLN2P98095 1184 aa17.23■□□□□ 0.35
CD46P1-201ENST00000441364 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
CD46P1-201ENST00000441364 SOGA1O94964 1423 aa17.2■□□□□ 0.34
CD46P1-201ENST00000441364 TRHP20396 242 aaPredicted RBP17.19■□□□□ 0.34
CD46P1-201ENST00000441364 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
CD46P1-201ENST00000441364 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
CD46P1-201ENST00000441364 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
CD46P1-201ENST00000441364 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
CD46P1-201ENST00000441364 SYNJ1O43426 1573 aa17.15■□□□□ 0.34
CD46P1-201ENST00000441364 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
CD46P1-201ENST00000441364 CUX1P39880 1505 aa17.12■□□□□ 0.33
CD46P1-201ENST00000441364 PBRM1Q86U86 1689 aa17.1■□□□□ 0.33
CD46P1-201ENST00000441364 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
CD46P1-201ENST00000441364 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
CD46P1-201ENST00000441364 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
CD46P1-201ENST00000441364 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
CD46P1-201ENST00000441364 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
CD46P1-201ENST00000441364 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
CD46P1-201ENST00000441364 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
CD46P1-201ENST00000441364 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms