RNA–Protein interactions for RNA: ENST00000441219.5

GABRE-203, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 1,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-203ENST00000441219 QKIQ96PU8 341 aaKnown RBP eCLIP8.17□□□□□ -1.13e-73■■■■□ 26.1
GABRE-203ENST00000441219 TARDBPQ13148 414 aaKnown RBP eCLIP9.5□□□□□ -0.899e-36■■□□□ 13.7
GABRE-203ENST00000441219 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.74□□□□□ -1.336e-27■■■■■ 1135.2
GABRE-203ENST00000441219 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.167e-17■■■■□ 19.7
GABRE-203ENST00000441219 RBFOX2O43251 390 aaKnown RBP eCLIP6.05□□□□□ -1.443e-15■■■■■ 30.8
GABRE-203ENST00000441219 EFTUD2Q15029 972 aaKnown RBP eCLIP7.97□□□□□ -1.136e-15■■■□□ 15.9
GABRE-203ENST00000441219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.34□□□□□ -0.752e-13■□□□□ 9.9
GABRE-203ENST00000441219 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.846e-13■□□□□ 9.5
GABRE-203ENST00000441219 GTF2F1P35269 517 aaKnown RBP eCLIP10.57□□□□□ -0.729e-13■■□□□ 12.2
GABRE-203ENST00000441219 FMR1Q06787 632 aaKnown RBP eCLIP12.28□□□□□ -0.443e-12■■■■■ 40.7
GABRE-203ENST00000441219 HNRNPLP14866 589 aaKnown RBP eCLIP9.65□□□□□ -0.864e-11■■■■□ 23.5
GABRE-203ENST00000441219 RBM22Q9NW64 420 aaKnown RBP eCLIP8.47□□□□□ -1.055e-11■■■■■ 31.7
GABRE-203ENST00000441219 PUM1Q14671 1186 aaKnown RBP eCLIP10.44□□□□□ -0.746e-11■□□□□ 10.3
GABRE-203ENST00000441219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.057e-11■■■■■ 45.6
GABRE-203ENST00000441219 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.331e-10■■■□□ 18.8
GABRE-203ENST00000441219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.09□□□□□ -0.634e-10■■■■■ 31.4
GABRE-203ENST00000441219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.03□□□□□ -1.125e-10■■□□□ 14.2
GABRE-203ENST00000441219 SMNDC1O75940 238 aaKnown RBP eCLIP8.06□□□□□ -1.125e-10■■■□□ 14.8
GABRE-203ENST00000441219 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.652e-9■□□□□ 11.2
GABRE-203ENST00000441219 CSTF2P33240 577 aaKnown RBP eCLIP8.96□□□□□ -0.982e-9■■■■■ 28.9
GABRE-203ENST00000441219 HNRNPMP52272 730 aaKnown RBP eCLIP14.76□□□□□ -0.052e-9■■■■■ 28.2
GABRE-203ENST00000441219 FUSP35637 526 aaKnown RBP eCLIP6.25□□□□□ -1.413e-9■■■□□ 18.5
GABRE-203ENST00000441219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.58□□□□□ -1.047e-9■■■■■ 38.4
GABRE-203ENST00000441219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.429e-9■□□□□ 10.9
GABRE-203ENST00000441219 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.591e-8■□□□□ 9.5
GABRE-203ENST00000441219 HNRNPKP61978 463 aaKnown RBP eCLIP9.14□□□□□ -0.952e-8■■■□□ 15.2
GABRE-203ENST00000441219 NIPBLQ6KC79 2804 aaeCLIP8.98□□□□□ -0.972e-8■■■□□ 15.6
GABRE-203ENST00000441219 NONOQ15233 471 aaKnown RBP eCLIP10.19□□□□□ -0.782e-8■□□□□ 8.9
GABRE-203ENST00000441219 AATFQ9NY61 560 aaKnown RBP eCLIP10.89□□□□□ -0.674e-8■□□□□ 10.6
GABRE-203ENST00000441219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.28□□□□□ -1.084e-8■■■□□ 16.3
GABRE-203ENST00000441219 ZRANB2O95218 330 aaKnown RBP eCLIP8.45□□□□□ -1.065e-8■■■■□ 23.7
GABRE-203ENST00000441219 SRSF7Q16629 238 aaKnown RBP eCLIP6.93□□□□□ -1.36e-8■■■□□ 17.8
GABRE-203ENST00000441219 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.576e-8■■■□□ 16
GABRE-203ENST00000441219 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.438e-8■■□□□ 12.6
GABRE-203ENST00000441219 PTBP1P26599 531 aaKnown RBP eCLIP6.25□□□□□ -1.411e-7■■■□□ 18.5
GABRE-203ENST00000441219 SF3B4Q15427 424 aaKnown RBP eCLIP8.09□□□□□ -1.111e-7■■■■■ 28.3
GABRE-203ENST00000441219 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.15□□□□□ -1.11e-7■■■□□ 18.2
GABRE-203ENST00000441219 NCBP2P52298 156 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■□□□ 11.5
GABRE-203ENST00000441219 RBM15Q96T37 977 aaKnown RBP eCLIP8.93□□□□□ -0.981e-7■□□□□ 10.1
GABRE-203ENST00000441219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■■□□ 16
GABRE-203ENST00000441219 HNRNPCP07910 306 aaKnown RBP eCLIP5.99□□□□□ -1.452e-7■■■□□ 18
GABRE-203ENST00000441219 TIAL1Q01085 375 aaKnown RBP eCLIP7.88□□□□□ -1.152e-7■■■■□ 19.3
GABRE-203ENST00000441219 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.71□□□□□ -1.182e-7■■■□□ 19.1
GABRE-203ENST00000441219 TIA1P31483 386 aaKnown RBP eCLIP7.54□□□□□ -1.24e-7■■■□□ 15.9
GABRE-203ENST00000441219 U2AF2P26368 475 aaKnown RBP eCLIP9.74□□□□□ -0.854e-7■■■■■ 31.4
GABRE-203ENST00000441219 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.545e-7■■■■□ 20.9
GABRE-203ENST00000441219 PPIGQ13427 754 aaKnown RBP eCLIP10.97□□□□□ -0.655e-7■■□□□ 12.9
GABRE-203ENST00000441219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.54□□□□□ -1.046e-7■■■■□ 22.1
GABRE-203ENST00000441219 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.03□□□□□ -0.646e-7■■■□□ 17.6
GABRE-203ENST00000441219 SF3A3Q12874 501 aaKnown RBP eCLIP6.64□□□□□ -1.356e-7■■■□□ 18.5
GABRE-203ENST00000441219 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.879e-7■■□□□ 13.9
GABRE-203ENST00000441219 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■■□ 25.8
GABRE-203ENST00000441219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.21■□□□□ 0.021e-6■■■□□ 14.9
GABRE-203ENST00000441219 LSM11P83369 360 aaKnown RBP eCLIP7.93□□□□□ -1.141e-6■■■■□ 21.8
GABRE-203ENST00000441219 AARSP49588 968 aaKnown RBP eCLIP9.56□□□□□ -0.881e-6■■■□□ 17.8
GABRE-203ENST00000441219 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.19□□□□□ -0.941e-6■■■□□ 16.8
GABRE-203ENST00000441219 SAFBQ15424 915 aaKnown RBP eCLIP9.51□□□□□ -0.892e-6■□□□□ 11.3
GABRE-203ENST00000441219 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.56□□□□□ -1.042e-6■■■□□ 15.1
GABRE-203ENST00000441219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■■■□ 22
GABRE-203ENST00000441219 SF3B1O75533 1304 aaKnown RBP eCLIP9.89□□□□□ -0.832e-6■■■□□ 17
GABRE-203ENST00000441219 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.883e-6■■■■□ 20
GABRE-203ENST00000441219 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.47□□□□□ -0.733e-6■■■■■ 34.1
GABRE-203ENST00000441219 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.6□□□□□ -0.714e-6■■■■■ 36.3
GABRE-203ENST00000441219 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.33□□□□□ -0.924e-6■■□□□ 11.8
GABRE-203ENST00000441219 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.45□□□□□ -1.068e-6■■□□□ 11.8
Retrieved 65 of 65 RNA–protein pairs in 50 ms