RNA–Protein interactions for RNA: ENST00000440759.5

TRO-213, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-213ENST00000440759 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
TRO-213ENST00000440759 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
TRO-213ENST00000440759 ABCC9O60706 1549 aa25.27■■□□□ 1.64
TRO-213ENST00000440759 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
TRO-213ENST00000440759 NACADO15069 1562 aa24.03■■□□□ 1.44
TRO-213ENST00000440759 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
TRO-213ENST00000440759 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
TRO-213ENST00000440759 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
TRO-213ENST00000440759 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
TRO-213ENST00000440759 DCAF1Q9Y4B6 1507 aa23.54■■□□□ 1.36
TRO-213ENST00000440759 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
TRO-213ENST00000440759 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
TRO-213ENST00000440759 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
TRO-213ENST00000440759 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
TRO-213ENST00000440759 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
TRO-213ENST00000440759 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
TRO-213ENST00000440759 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
TRO-213ENST00000440759 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
TRO-213ENST00000440759 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
TRO-213ENST00000440759 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
TRO-213ENST00000440759 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.13
TRO-213ENST00000440759 SMARCA2P51531 1590 aa22.08■■□□□ 1.12
TRO-213ENST00000440759 BAZ1AQ9NRL2 1556 aaPredicted RBP22.08■■□□□ 1.12
TRO-213ENST00000440759 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
TRO-213ENST00000440759 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
TRO-213ENST00000440759 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
TRO-213ENST00000440759 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
TRO-213ENST00000440759 NESP48681 1621 aa21.8■■□□□ 1.08
TRO-213ENST00000440759 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
TRO-213ENST00000440759 WIZO95785 1651 aa21.73■■□□□ 1.07
TRO-213ENST00000440759 CUX2O14529 1486 aa21.7■■□□□ 1.06
TRO-213ENST00000440759 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
TRO-213ENST00000440759 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
TRO-213ENST00000440759 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
TRO-213ENST00000440759 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
TRO-213ENST00000440759 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
TRO-213ENST00000440759 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
TRO-213ENST00000440759 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
TRO-213ENST00000440759 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
TRO-213ENST00000440759 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
TRO-213ENST00000440759 WDR62O43379 1518 aa21.31■■□□□ 1
TRO-213ENST00000440759 CFTRP13569 1480 aa21.3■■□□□ 1
TRO-213ENST00000440759 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
TRO-213ENST00000440759 FANCD2Q9BXW9 1451 aa21.25■□□□□ 0.99
TRO-213ENST00000440759 PRDM2Q13029 1718 aa21.24■□□□□ 0.99
TRO-213ENST00000440759 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
TRO-213ENST00000440759 URB2Q14146 1524 aaKnown RBP21.12■□□□□ 0.97
TRO-213ENST00000440759 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
TRO-213ENST00000440759 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
TRO-213ENST00000440759 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
TRO-213ENST00000440759 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
TRO-213ENST00000440759 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
TRO-213ENST00000440759 EIF4G3O43432 1585 aaKnown RBP20.76■□□□□ 0.91
TRO-213ENST00000440759 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
TRO-213ENST00000440759 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
TRO-213ENST00000440759 CUX1P39880 1505 aa20.63■□□□□ 0.89
TRO-213ENST00000440759 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
TRO-213ENST00000440759 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
TRO-213ENST00000440759 AQRO60306 1485 aaKnown RBP eCLIP20.6■□□□□ 0.89
TRO-213ENST00000440759 CHD1O14646 1710 aa20.59■□□□□ 0.89
TRO-213ENST00000440759 FGD5Q6ZNL6 1462 aa20.59■□□□□ 0.89
TRO-213ENST00000440759 SUPT5HO00267 1087 aaKnown RBP20.58■□□□□ 0.89
TRO-213ENST00000440759 WDR97A6NE52 1622 aa20.56■□□□□ 0.88
TRO-213ENST00000440759 SOGA1O94964 1423 aa20.53■□□□□ 0.88
TRO-213ENST00000440759 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
TRO-213ENST00000440759 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
TRO-213ENST00000440759 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
TRO-213ENST00000440759 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
TRO-213ENST00000440759 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
TRO-213ENST00000440759 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
TRO-213ENST00000440759 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
TRO-213ENST00000440759 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
TRO-213ENST00000440759 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
TRO-213ENST00000440759 BIVM-ERCC5R4GMW8 1640 aa20.38■□□□□ 0.85
TRO-213ENST00000440759 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
TRO-213ENST00000440759 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
TRO-213ENST00000440759 GRIN2BQ13224 1484 aa20.36■□□□□ 0.85
TRO-213ENST00000440759 MAGI1Q96QZ7 1491 aaPredicted RBP20.36■□□□□ 0.85
TRO-213ENST00000440759 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
TRO-213ENST00000440759 CLASP1Q7Z460 1538 aa20.33■□□□□ 0.85
TRO-213ENST00000440759 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
TRO-213ENST00000440759 FBLN2P98095 1184 aa20.3■□□□□ 0.84
TRO-213ENST00000440759 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
TRO-213ENST00000440759 WRNQ14191 1432 aaPredicted RBP eCLIP20.28■□□□□ 0.84
TRO-213ENST00000440759 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
TRO-213ENST00000440759 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
TRO-213ENST00000440759 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
TRO-213ENST00000440759 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
TRO-213ENST00000440759 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
TRO-213ENST00000440759 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
TRO-213ENST00000440759 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
TRO-213ENST00000440759 NUP160Q12769 1436 aa20.07■□□□□ 0.8
TRO-213ENST00000440759 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
TRO-213ENST00000440759 ERCC6L2Q5T890 1561 aa20.04■□□□□ 0.8
TRO-213ENST00000440759 SHROOM2Q13796 1616 aa20.02■□□□□ 0.8
TRO-213ENST00000440759 RUSC2Q8N2Y8 1516 aa19.94■□□□□ 0.78
TRO-213ENST00000440759 CUL7Q14999 1698 aa19.88■□□□□ 0.77
TRO-213ENST00000440759 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
TRO-213ENST00000440759 IGF1RP08069 1367 aa19.83■□□□□ 0.77
TRO-213ENST00000440759 PRG4Q92954 1404 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms