RNA–Protein interactions for RNA: ENST00000440484.1

CASP9-206, Transcript of caspase 9, humanhuman

TSL 4

Gene CASP9, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-206ENST00000440484 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
CASP9-206ENST00000440484 CCDC180Q9P1Z9 1646 aa31.74■■■□□ 2.67
CASP9-206ENST00000440484 ABCC9O60706 1549 aa31.45■■■□□ 2.63
CASP9-206ENST00000440484 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
CASP9-206ENST00000440484 NACADO15069 1562 aa29.9■■■□□ 2.38
CASP9-206ENST00000440484 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
CASP9-206ENST00000440484 MYO15BQ96JP2 1530 aa29.62■■■□□ 2.33
CASP9-206ENST00000440484 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
CASP9-206ENST00000440484 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
CASP9-206ENST00000440484 DCAF1Q9Y4B6 1507 aa29.36■■■□□ 2.29
CASP9-206ENST00000440484 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
CASP9-206ENST00000440484 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
CASP9-206ENST00000440484 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
CASP9-206ENST00000440484 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
CASP9-206ENST00000440484 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
CASP9-206ENST00000440484 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
CASP9-206ENST00000440484 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
CASP9-206ENST00000440484 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
CASP9-206ENST00000440484 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
CASP9-206ENST00000440484 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
CASP9-206ENST00000440484 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
CASP9-206ENST00000440484 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
CASP9-206ENST00000440484 SMARCA2P51531 1590 aa27.49■■□□□ 1.99
CASP9-206ENST00000440484 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
CASP9-206ENST00000440484 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
CASP9-206ENST00000440484 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
CASP9-206ENST00000440484 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
CASP9-206ENST00000440484 NESP48681 1621 aa27.16■■□□□ 1.94
CASP9-206ENST00000440484 WIZO95785 1651 aa27.1■■□□□ 1.93
CASP9-206ENST00000440484 ERCC6Q03468 1493 aa27.06■■□□□ 1.92
CASP9-206ENST00000440484 CUX2O14529 1486 aa26.95■■□□□ 1.91
CASP9-206ENST00000440484 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
CASP9-206ENST00000440484 RSF1Q96T23 1441 aaPredicted RBP26.94■■□□□ 1.9
CASP9-206ENST00000440484 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
CASP9-206ENST00000440484 KIF21AQ7Z4S6 1674 aa26.79■■□□□ 1.88
CASP9-206ENST00000440484 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
CASP9-206ENST00000440484 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
CASP9-206ENST00000440484 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
CASP9-206ENST00000440484 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
CASP9-206ENST00000440484 CFTRP13569 1480 aa26.58■■□□□ 1.85
CASP9-206ENST00000440484 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
CASP9-206ENST00000440484 WDR62O43379 1518 aa26.5■■□□□ 1.83
CASP9-206ENST00000440484 FANCD2Q9BXW9 1451 aa26.49■■□□□ 1.83
CASP9-206ENST00000440484 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
CASP9-206ENST00000440484 CCDC88BA6NC98 1476 aa26.45■■□□□ 1.82
CASP9-206ENST00000440484 PRDM2Q13029 1718 aa26.32■■□□□ 1.8
CASP9-206ENST00000440484 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
CASP9-206ENST00000440484 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
CASP9-206ENST00000440484 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
CASP9-206ENST00000440484 ZNF608Q9ULD9 1512 aaPredicted RBP25.94■■□□□ 1.74
CASP9-206ENST00000440484 IFT140Q96RY7 1462 aa25.93■■□□□ 1.74
CASP9-206ENST00000440484 ABCC8Q09428 1581 aa25.9■■□□□ 1.74
CASP9-206ENST00000440484 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
CASP9-206ENST00000440484 TARBP1Q13395 1621 aaKnown RBP25.84■■□□□ 1.73
CASP9-206ENST00000440484 POLA1P09884 1462 aaPredicted RBP25.81■■□□□ 1.72
CASP9-206ENST00000440484 EIF4G3O43432 1585 aaKnown RBP25.79■■□□□ 1.72
CASP9-206ENST00000440484 CUX1P39880 1505 aa25.74■■□□□ 1.71
CASP9-206ENST00000440484 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
CASP9-206ENST00000440484 AQRO60306 1485 aaKnown RBP eCLIP25.71■■□□□ 1.713e-6■■■□□ 17.3
CASP9-206ENST00000440484 OSCARQ8IYS5 282 aa25.7■■□□□ 1.7
CASP9-206ENST00000440484 FGD5Q6ZNL6 1462 aa25.67■■□□□ 1.7
CASP9-206ENST00000440484 SOGA1O94964 1423 aa25.63■■□□□ 1.69
CASP9-206ENST00000440484 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
CASP9-206ENST00000440484 WDR97A6NE52 1622 aa25.53■■□□□ 1.68
CASP9-206ENST00000440484 CHD1O14646 1710 aa25.53■■□□□ 1.68
CASP9-206ENST00000440484 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
CASP9-206ENST00000440484 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.67
CASP9-206ENST00000440484 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.67
CASP9-206ENST00000440484 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.67
CASP9-206ENST00000440484 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
CASP9-206ENST00000440484 SYNJ1O43426 1573 aa25.4■■□□□ 1.66
CASP9-206ENST00000440484 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
CASP9-206ENST00000440484 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
CASP9-206ENST00000440484 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
CASP9-206ENST00000440484 GRIN2BQ13224 1484 aa25.39■■□□□ 1.65
CASP9-206ENST00000440484 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
CASP9-206ENST00000440484 ABCA5Q8WWZ7 1642 aa25.37■■□□□ 1.65
CASP9-206ENST00000440484 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
CASP9-206ENST00000440484 FBLN2P98095 1184 aa25.36■■□□□ 1.65
CASP9-206ENST00000440484 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
CASP9-206ENST00000440484 PBRM1Q86U86 1689 aa25.35■■□□□ 1.65
CASP9-206ENST00000440484 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
CASP9-206ENST00000440484 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
CASP9-206ENST00000440484 CLASP1Q7Z460 1538 aa25.28■■□□□ 1.64
CASP9-206ENST00000440484 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
CASP9-206ENST00000440484 ARAP1Q96P48 1450 aa25.2■■□□□ 1.62
CASP9-206ENST00000440484 ADAMTS12P58397 1594 aa25.14■■□□□ 1.62
CASP9-206ENST00000440484 CYB5RLQ6IPT4 315 aa25.11■■□□□ 1.61
CASP9-206ENST00000440484 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
CASP9-206ENST00000440484 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
CASP9-206ENST00000440484 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
CASP9-206ENST00000440484 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
CASP9-206ENST00000440484 NUP160Q12769 1436 aa25.02■■□□□ 1.6
CASP9-206ENST00000440484 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
CASP9-206ENST00000440484 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
CASP9-206ENST00000440484 IGF1RP08069 1367 aa24.83■■□□□ 1.57
CASP9-206ENST00000440484 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
CASP9-206ENST00000440484 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
CASP9-206ENST00000440484 CUL7Q14999 1698 aa24.75■■□□□ 1.55
CASP9-206ENST00000440484 PRG4Q92954 1404 aaPredicted RBP24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms