RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 NISCHQ9Y2I1 1504 aa42.04■■■■■ 4.32
COL16A1-204ENST00000440437 CCDC180Q9P1Z9 1646 aa37.71■■■■□ 3.63
COL16A1-204ENST00000440437 ABCC9O60706 1549 aa37.3■■■■□ 3.56
COL16A1-204ENST00000440437 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
COL16A1-204ENST00000440437 NACADO15069 1562 aa35.51■■■■□ 3.27
COL16A1-204ENST00000440437 DCAF8L2P0C7V8 631 aa35.14■■■■□ 3.22
COL16A1-204ENST00000440437 MYO15BQ96JP2 1530 aa35.14■■■■□ 3.22
COL16A1-204ENST00000440437 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.2
COL16A1-204ENST00000440437 ZCCHC6Q5VYS8 1495 aaKnown RBP34.93■■■■□ 3.18
COL16A1-204ENST00000440437 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
COL16A1-204ENST00000440437 DNAJC5BQ9UF47 199 aa34.7■■■■□ 3.15
COL16A1-204ENST00000440437 PABPN1Q86U42 306 aaKnown RBP eCLIP34.68■■■■□ 3.141e-6■■■■□ 25.6
COL16A1-204ENST00000440437 BICRAQ9NZM4 1560 aa34.68■■■■□ 3.14
COL16A1-204ENST00000440437 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
COL16A1-204ENST00000440437 SHROOM4Q9ULL8 1493 aa34.24■■■■□ 3.07
COL16A1-204ENST00000440437 CC2D2AQ9P2K1 1620 aa33.78■■■■□ 3
COL16A1-204ENST00000440437 EIF4G1Q04637 1599 aaKnown RBP33.77■■■■□ 3
COL16A1-204ENST00000440437 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.97
COL16A1-204ENST00000440437 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
COL16A1-204ENST00000440437 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
COL16A1-204ENST00000440437 ATAD2BQ9ULI0 1458 aa32.68■■■□□ 2.82
COL16A1-204ENST00000440437 SMARCA2P51531 1590 aa32.63■■■□□ 2.81
COL16A1-204ENST00000440437 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
COL16A1-204ENST00000440437 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
COL16A1-204ENST00000440437 PEG3Q9GZU2 1588 aa32.49■■■□□ 2.79
COL16A1-204ENST00000440437 MROH2BQ7Z745 1585 aa32.4■■■□□ 2.78
COL16A1-204ENST00000440437 BAZ1BQ9UIG0 1483 aaKnown RBP32.37■■■□□ 2.77
COL16A1-204ENST00000440437 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
COL16A1-204ENST00000440437 NESP48681 1621 aa32.15■■■□□ 2.74
COL16A1-204ENST00000440437 CUX2O14529 1486 aa32.09■■■□□ 2.73
COL16A1-204ENST00000440437 WIZO95785 1651 aa32.05■■■□□ 2.72
COL16A1-204ENST00000440437 LAMC3Q9Y6N6 1575 aa32.02■■■□□ 2.72
COL16A1-204ENST00000440437 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
COL16A1-204ENST00000440437 KIF21AQ7Z4S6 1674 aa31.83■■■□□ 2.69
COL16A1-204ENST00000440437 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
COL16A1-204ENST00000440437 PDS5BQ9NTI5 1447 aa31.73■■■□□ 2.67
COL16A1-204ENST00000440437 CADPSQ9ULU8 1353 aa31.72■■■□□ 2.67
COL16A1-204ENST00000440437 TOP2AP11388 1531 aaKnown RBP31.66■■■□□ 2.66
COL16A1-204ENST00000440437 DNAJC5Q9H3Z4 198 aa31.65■■■□□ 2.66
COL16A1-204ENST00000440437 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
COL16A1-204ENST00000440437 CFTRP13569 1480 aa31.46■■■□□ 2.63
COL16A1-204ENST00000440437 WDR62O43379 1518 aa31.44■■■□□ 2.62
COL16A1-204ENST00000440437 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
COL16A1-204ENST00000440437 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
COL16A1-204ENST00000440437 PRDM2Q13029 1718 aa31.33■■■□□ 2.61
COL16A1-204ENST00000440437 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
COL16A1-204ENST00000440437 URB2Q14146 1524 aaKnown RBP31.14■■■□□ 2.58
COL16A1-204ENST00000440437 TOPBP1Q92547 1522 aa30.85■■■□□ 2.53
COL16A1-204ENST00000440437 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
COL16A1-204ENST00000440437 ABCC8Q09428 1581 aa30.78■■■□□ 2.52
COL16A1-204ENST00000440437 IFT140Q96RY7 1462 aa30.76■■■□□ 2.52
COL16A1-204ENST00000440437 ZNF608Q9ULD9 1512 aaPredicted RBP30.69■■■□□ 2.5
COL16A1-204ENST00000440437 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
COL16A1-204ENST00000440437 TARBP1Q13395 1621 aaKnown RBP30.61■■■□□ 2.49
COL16A1-204ENST00000440437 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
COL16A1-204ENST00000440437 OSCARQ8IYS5 282 aa30.53■■■□□ 2.48
COL16A1-204ENST00000440437 SUPT5HO00267 1087 aaKnown RBP30.43■■■□□ 2.46
COL16A1-204ENST00000440437 CUX1P39880 1505 aa30.42■■■□□ 2.46
COL16A1-204ENST00000440437 AQRO60306 1485 aaKnown RBP eCLIP30.41■■■□□ 2.46
COL16A1-204ENST00000440437 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
COL16A1-204ENST00000440437 FGD5Q6ZNL6 1462 aa30.39■■■□□ 2.46
COL16A1-204ENST00000440437 CHD1O14646 1710 aa30.36■■■□□ 2.45
COL16A1-204ENST00000440437 SOGA1O94964 1423 aa30.35■■■□□ 2.45
COL16A1-204ENST00000440437 WDR97A6NE52 1622 aa30.34■■■□□ 2.45
COL16A1-204ENST00000440437 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3CA6NJZ7 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3BA6NNM3 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 RIMBP3Q9UFD9 1639 aa30.27■■■□□ 2.44
COL16A1-204ENST00000440437 TDRD9Q8NDG6 1382 aaKnown RBP30.24■■■□□ 2.43
COL16A1-204ENST00000440437 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
COL16A1-204ENST00000440437 SNAPC4Q5SXM2 1469 aa30.15■■■□□ 2.42
COL16A1-204ENST00000440437 PBRM1Q86U86 1689 aa30.12■■■□□ 2.41
COL16A1-204ENST00000440437 GRIN2BQ13224 1484 aa30.1■■■□□ 2.41
COL16A1-204ENST00000440437 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
COL16A1-204ENST00000440437 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
COL16A1-204ENST00000440437 ABCA10Q8WWZ4 1543 aa30.08■■■□□ 2.41
COL16A1-204ENST00000440437 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
COL16A1-204ENST00000440437 FBLN2P98095 1184 aa30.05■■■□□ 2.4
COL16A1-204ENST00000440437 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
COL16A1-204ENST00000440437 GAPVD1Q14C86 1478 aa30.02■■■□□ 2.4
COL16A1-204ENST00000440437 SYNJ1O43426 1573 aa30.01■■■□□ 2.39
COL16A1-204ENST00000440437 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
COL16A1-204ENST00000440437 SYNJ2O15056 1496 aa29.98■■■□□ 2.39
COL16A1-204ENST00000440437 WRNQ14191 1432 aaPredicted RBP eCLIP29.97■■■□□ 2.39
COL16A1-204ENST00000440437 CHMP7Q8WUX9 453 aaPredicted RBP29.9■■■□□ 2.38
COL16A1-204ENST00000440437 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
COL16A1-204ENST00000440437 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
COL16A1-204ENST00000440437 CYB5RLQ6IPT4 315 aa29.78■■■□□ 2.36
COL16A1-204ENST00000440437 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
COL16A1-204ENST00000440437 ERICH3Q5RHP9 1530 aa29.71■■■□□ 2.35
COL16A1-204ENST00000440437 CEP170Q5SW79 1584 aa29.65■■■□□ 2.34
COL16A1-204ENST00000440437 FHAD1B1AJZ9 1412 aa29.65■■■□□ 2.34
COL16A1-204ENST00000440437 NUP160Q12769 1436 aa29.63■■■□□ 2.33
COL16A1-204ENST00000440437 SHROOM2Q13796 1616 aa29.54■■■□□ 2.32
COL16A1-204ENST00000440437 ERCC6L2Q5T890 1561 aa29.52■■■□□ 2.32
COL16A1-204ENST00000440437 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
COL16A1-204ENST00000440437 CUL7Q14999 1698 aa29.37■■■□□ 2.29
COL16A1-204ENST00000440437 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
COL16A1-204ENST00000440437 TRHP20396 242 aaPredicted RBP29.34■■■□□ 2.29
COL16A1-204ENST00000440437 IGF1RP08069 1367 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms