RNA–Protein interactions for RNA: ENST00000440189.1

AC016396.1-201, humanhuman

TSL 3 BASIC

Gene AC016396.1, Length 328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016396.1-201ENST00000440189 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
AC016396.1-201ENST00000440189 ABCC9O60706 1549 aa17.84■□□□□ 0.45
AC016396.1-201ENST00000440189 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
AC016396.1-201ENST00000440189 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
AC016396.1-201ENST00000440189 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
AC016396.1-201ENST00000440189 NACADO15069 1562 aa16.64■□□□□ 0.25
AC016396.1-201ENST00000440189 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
AC016396.1-201ENST00000440189 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
AC016396.1-201ENST00000440189 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
AC016396.1-201ENST00000440189 BICRAQ9NZM4 1560 aa16.39■□□□□ 0.21
AC016396.1-201ENST00000440189 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
AC016396.1-201ENST00000440189 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
AC016396.1-201ENST00000440189 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
AC016396.1-201ENST00000440189 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
AC016396.1-201ENST00000440189 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
AC016396.1-201ENST00000440189 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
AC016396.1-201ENST00000440189 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
AC016396.1-201ENST00000440189 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
AC016396.1-201ENST00000440189 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
AC016396.1-201ENST00000440189 DNAJC5Q9H3Z4 198 aa15.61■□□□□ 0.09
AC016396.1-201ENST00000440189 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
AC016396.1-201ENST00000440189 CUX2O14529 1486 aa15.37■□□□□ 0.05
AC016396.1-201ENST00000440189 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
AC016396.1-201ENST00000440189 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
AC016396.1-201ENST00000440189 NESP48681 1621 aa15.28■□□□□ 0.04
AC016396.1-201ENST00000440189 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
AC016396.1-201ENST00000440189 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
AC016396.1-201ENST00000440189 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
AC016396.1-201ENST00000440189 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
AC016396.1-201ENST00000440189 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
AC016396.1-201ENST00000440189 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
AC016396.1-201ENST00000440189 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
AC016396.1-201ENST00000440189 PEG3Q9GZU2 1588 aa15.09■□□□□ 0.01
AC016396.1-201ENST00000440189 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
AC016396.1-201ENST00000440189 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
AC016396.1-201ENST00000440189 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
AC016396.1-201ENST00000440189 PDS5BQ9NTI5 1447 aa14.98□□□□□ -0.01
AC016396.1-201ENST00000440189 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
AC016396.1-201ENST00000440189 TRIM41Q8WV44 630 aa14.91□□□□□ -0.02
AC016396.1-201ENST00000440189 WIZO95785 1651 aa14.9□□□□□ -0.02
AC016396.1-201ENST00000440189 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
AC016396.1-201ENST00000440189 WDR62O43379 1518 aa14.85□□□□□ -0.03
AC016396.1-201ENST00000440189 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
AC016396.1-201ENST00000440189 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
AC016396.1-201ENST00000440189 CFTRP13569 1480 aa14.7□□□□□ -0.06
AC016396.1-201ENST00000440189 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
AC016396.1-201ENST00000440189 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
AC016396.1-201ENST00000440189 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
AC016396.1-201ENST00000440189 TOP2AP11388 1531 aaKnown RBP14.65□□□□□ -0.06
AC016396.1-201ENST00000440189 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
AC016396.1-201ENST00000440189 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
AC016396.1-201ENST00000440189 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
AC016396.1-201ENST00000440189 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
AC016396.1-201ENST00000440189 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
AC016396.1-201ENST00000440189 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
AC016396.1-201ENST00000440189 IFT140Q96RY7 1462 aa14.49□□□□□ -0.09
AC016396.1-201ENST00000440189 TOPBP1Q92547 1522 aa14.46□□□□□ -0.09
AC016396.1-201ENST00000440189 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
AC016396.1-201ENST00000440189 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
AC016396.1-201ENST00000440189 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
AC016396.1-201ENST00000440189 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.11
AC016396.1-201ENST00000440189 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
AC016396.1-201ENST00000440189 CHD1O14646 1710 aa14.37□□□□□ -0.11
AC016396.1-201ENST00000440189 ABCC8Q09428 1581 aa14.35□□□□□ -0.11
AC016396.1-201ENST00000440189 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
AC016396.1-201ENST00000440189 FBLN2P98095 1184 aa14.33□□□□□ -0.12
AC016396.1-201ENST00000440189 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
AC016396.1-201ENST00000440189 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
AC016396.1-201ENST00000440189 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
AC016396.1-201ENST00000440189 TDRD9Q8NDG6 1382 aaKnown RBP14.27□□□□□ -0.12
AC016396.1-201ENST00000440189 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
AC016396.1-201ENST00000440189 SOGA1O94964 1423 aa14.24□□□□□ -0.13
AC016396.1-201ENST00000440189 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
AC016396.1-201ENST00000440189 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
AC016396.1-201ENST00000440189 CLASP1Q7Z460 1538 aa14.18□□□□□ -0.14
AC016396.1-201ENST00000440189 CUX1P39880 1505 aa14.17□□□□□ -0.14
AC016396.1-201ENST00000440189 CHMP7Q8WUX9 453 aaPredicted RBP14.15□□□□□ -0.14
AC016396.1-201ENST00000440189 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
AC016396.1-201ENST00000440189 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
AC016396.1-201ENST00000440189 GRIN2BQ13224 1484 aa14.12□□□□□ -0.15
AC016396.1-201ENST00000440189 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
AC016396.1-201ENST00000440189 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
AC016396.1-201ENST00000440189 PBRM1Q86U86 1689 aa14.07□□□□□ -0.16
AC016396.1-201ENST00000440189 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
AC016396.1-201ENST00000440189 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
AC016396.1-201ENST00000440189 ERCC6L2Q5T890 1561 aa14□□□□□ -0.17
AC016396.1-201ENST00000440189 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
AC016396.1-201ENST00000440189 GRIN2AQ12879 1464 aa13.95□□□□□ -0.18
AC016396.1-201ENST00000440189 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
AC016396.1-201ENST00000440189 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
AC016396.1-201ENST00000440189 ADAMTS12P58397 1594 aa13.92□□□□□ -0.18
AC016396.1-201ENST00000440189 NUP160Q12769 1436 aa13.9□□□□□ -0.18
AC016396.1-201ENST00000440189 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.19
AC016396.1-201ENST00000440189 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
AC016396.1-201ENST00000440189 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
AC016396.1-201ENST00000440189 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
AC016396.1-201ENST00000440189 FHAD1B1AJZ9 1412 aa13.85□□□□□ -0.19
AC016396.1-201ENST00000440189 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
AC016396.1-201ENST00000440189 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
AC016396.1-201ENST00000440189 ERICH3Q5RHP9 1530 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms