RNA–Protein interactions for RNA: ENST00000440132.2

RNF220-205, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-205ENST00000440132 NISCHQ9Y2I1 1504 aa47.2■■■■■ 5.15
RNF220-205ENST00000440132 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
RNF220-205ENST00000440132 ABCC9O60706 1549 aa41.02■■■■■ 4.16
RNF220-205ENST00000440132 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
RNF220-205ENST00000440132 NACADO15069 1562 aa39.45■■■■□ 3.91
RNF220-205ENST00000440132 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
RNF220-205ENST00000440132 ZCCHC6Q5VYS8 1495 aaKnown RBP39.31■■■■□ 3.88
RNF220-205ENST00000440132 MYO15BQ96JP2 1530 aa39.22■■■■□ 3.87
RNF220-205ENST00000440132 DCAF1Q9Y4B6 1507 aa39.06■■■■□ 3.84
RNF220-205ENST00000440132 UNC13AQ9UPW8 1703 aa38.64■■■■□ 3.78
RNF220-205ENST00000440132 PABPN1Q86U42 306 aaKnown RBP eCLIP38.33■■■■□ 3.73
RNF220-205ENST00000440132 BICRAQ9NZM4 1560 aa38.3■■■■□ 3.72
RNF220-205ENST00000440132 SCRIBQ14160 1630 aa38.27■■■■□ 3.72
RNF220-205ENST00000440132 SHROOM4Q9ULL8 1493 aa37.88■■■■□ 3.65
RNF220-205ENST00000440132 DNAJC5BQ9UF47 199 aa37.64■■■■□ 3.62
RNF220-205ENST00000440132 EIF4G1Q04637 1599 aaKnown RBP37.27■■■■□ 3.56
RNF220-205ENST00000440132 CC2D2AQ9P2K1 1620 aa37.13■■■■□ 3.53
RNF220-205ENST00000440132 CECR2Q9BXF3 1484 aa36.85■■■■□ 3.49
RNF220-205ENST00000440132 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
RNF220-205ENST00000440132 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
RNF220-205ENST00000440132 ATAD2BQ9ULI0 1458 aa36.41■■■■□ 3.42
RNF220-205ENST00000440132 NCAPD3P42695 1498 aa36.39■■■■□ 3.42
RNF220-205ENST00000440132 SMARCA2P51531 1590 aa36.38■■■■□ 3.41
RNF220-205ENST00000440132 MROH2BQ7Z745 1585 aa36.38■■■■□ 3.41
RNF220-205ENST00000440132 PEG3Q9GZU2 1588 aa36.27■■■■□ 3.4
RNF220-205ENST00000440132 HMGXB3Q12766 1538 aa36.21■■■■□ 3.39
RNF220-205ENST00000440132 BAZ1BQ9UIG0 1483 aaKnown RBP36.11■■■■□ 3.37
RNF220-205ENST00000440132 WIZO95785 1651 aa36■■■■□ 3.35
RNF220-205ENST00000440132 RSF1Q96T23 1441 aaPredicted RBP35.96■■■■□ 3.35
RNF220-205ENST00000440132 TOP2AP11388 1531 aaKnown RBP35.61■■■■□ 3.29
RNF220-205ENST00000440132 NESP48681 1621 aa35.5■■■■□ 3.27
RNF220-205ENST00000440132 LAMC3Q9Y6N6 1575 aa35.44■■■■□ 3.26
RNF220-205ENST00000440132 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
RNF220-205ENST00000440132 CADPSQ9ULU8 1353 aa35.33■■■■□ 3.25
RNF220-205ENST00000440132 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
RNF220-205ENST00000440132 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
RNF220-205ENST00000440132 CFTRP13569 1480 aa35.13■■■■□ 3.21
RNF220-205ENST00000440132 KIF21AQ7Z4S6 1674 aa35.12■■■■□ 3.21
RNF220-205ENST00000440132 SUPT5HO00267 1087 aaKnown RBP35.07■■■■□ 3.2
RNF220-205ENST00000440132 CUX2O14529 1486 aa34.98■■■■□ 3.19
RNF220-205ENST00000440132 THOC2Q8NI27 1593 aaKnown RBP34.97■■■■□ 3.19
RNF220-205ENST00000440132 FANCD2Q9BXW9 1451 aa34.92■■■■□ 3.18
RNF220-205ENST00000440132 PRDM2Q13029 1718 aa34.92■■■■□ 3.18
RNF220-205ENST00000440132 CEP164Q9UPV0 1460 aa34.88■■■■□ 3.17
RNF220-205ENST00000440132 MRC2Q9UBG0 1479 aa34.82■■■■□ 3.16
RNF220-205ENST00000440132 WDR62O43379 1518 aa34.71■■■■□ 3.15
RNF220-205ENST00000440132 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
RNF220-205ENST00000440132 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
RNF220-205ENST00000440132 TOPBP1Q92547 1522 aa34.37■■■■□ 3.09
RNF220-205ENST00000440132 DNMBPQ6XZF7 1577 aa34.34■■■■□ 3.09
RNF220-205ENST00000440132 IFT140Q96RY7 1462 aa34.15■■■■□ 3.06
RNF220-205ENST00000440132 CUX1P39880 1505 aa34.12■■■■□ 3.05
RNF220-205ENST00000440132 POLA1P09884 1462 aaPredicted RBP34.07■■■■□ 3.05
RNF220-205ENST00000440132 TARBP1Q13395 1621 aaKnown RBP34.01■■■■□ 3.04
RNF220-205ENST00000440132 FGD5Q6ZNL6 1462 aa34■■■■□ 3.03
RNF220-205ENST00000440132 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
RNF220-205ENST00000440132 SOGA1O94964 1423 aa33.95■■■■□ 3.02
RNF220-205ENST00000440132 RAD54L2Q9Y4B4 1467 aa33.93■■■■□ 3.02
RNF220-205ENST00000440132 WRNQ14191 1432 aaPredicted RBP eCLIP33.9■■■■□ 3.02
RNF220-205ENST00000440132 DNAJC5Q9H3Z4 198 aa33.89■■■■□ 3.02
RNF220-205ENST00000440132 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
RNF220-205ENST00000440132 EIF4G3O43432 1585 aaKnown RBP33.86■■■■□ 3.01
RNF220-205ENST00000440132 TOP2BQ02880 1626 aa33.85■■■■□ 3.01
RNF220-205ENST00000440132 SYNJ1O43426 1573 aa33.83■■■■□ 3.01
RNF220-205ENST00000440132 AQRO60306 1485 aaKnown RBP eCLIP33.8■■■■□ 33e-7■■■■□ 24.8
RNF220-205ENST00000440132 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
RNF220-205ENST00000440132 TDRD9Q8NDG6 1382 aaKnown RBP33.74■■■□□ 2.99
RNF220-205ENST00000440132 ABCA10Q8WWZ4 1543 aa33.68■■■□□ 2.98
RNF220-205ENST00000440132 GAPVD1Q14C86 1478 aa33.56■■■□□ 2.96
RNF220-205ENST00000440132 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
RNF220-205ENST00000440132 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
RNF220-205ENST00000440132 GRIN2BQ13224 1484 aa33.54■■■□□ 2.96
RNF220-205ENST00000440132 PBRM1Q86U86 1689 aa33.52■■■□□ 2.96
RNF220-205ENST00000440132 SNAPC4Q5SXM2 1469 aa33.49■■■□□ 2.95
RNF220-205ENST00000440132 CHD1O14646 1710 aa33.46■■■□□ 2.95
RNF220-205ENST00000440132 MAGI1Q96QZ7 1491 aaPredicted RBP33.45■■■□□ 2.95
RNF220-205ENST00000440132 FBLN2P98095 1184 aa33.39■■■□□ 2.94
RNF220-205ENST00000440132 SYNJ2O15056 1496 aa33.32■■■□□ 2.92
RNF220-205ENST00000440132 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
RNF220-205ENST00000440132 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
RNF220-205ENST00000440132 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
RNF220-205ENST00000440132 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
RNF220-205ENST00000440132 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
RNF220-205ENST00000440132 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
RNF220-205ENST00000440132 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
RNF220-205ENST00000440132 IGF1RP08069 1367 aa33.07■■■□□ 2.88
RNF220-205ENST00000440132 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.88
RNF220-205ENST00000440132 RIMBP3CA6NJZ7 1639 aa33.02■■■□□ 2.88
RNF220-205ENST00000440132 RIMBP3BA6NNM3 1639 aa33.02■■■□□ 2.88
RNF220-205ENST00000440132 RIMBP3Q9UFD9 1639 aa33.02■■■□□ 2.88
RNF220-205ENST00000440132 ARHGEF11O15085 1522 aa32.99■■■□□ 2.87
RNF220-205ENST00000440132 CUL7Q14999 1698 aa32.99■■■□□ 2.87
RNF220-205ENST00000440132 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
RNF220-205ENST00000440132 NUP160Q12769 1436 aa32.95■■■□□ 2.87
RNF220-205ENST00000440132 RUSC2Q8N2Y8 1516 aa32.92■■■□□ 2.86
RNF220-205ENST00000440132 CARMIL1Q5VZK9 1371 aa32.87■■■□□ 2.85
RNF220-205ENST00000440132 CHIC1Q5VXU3 224 aa32.74■■■□□ 2.83
RNF220-205ENST00000440132 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
RNF220-205ENST00000440132 ARAP1Q96P48 1450 aa32.72■■■□□ 2.83
RNF220-205ENST00000440132 CYB5RLQ6IPT4 315 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms