RNA–Protein interactions for RNA: ENST00000439915.1

ATAD2B-204, Transcript of ATPase family, AAA domain containing 2B, humanhuman

TSL 1 (best)

Gene ATAD2B, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD2B-204ENST00000439915 NISCHQ9Y2I1 1504 aa43.25■■■■■ 4.51
ATAD2B-204ENST00000439915 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
ATAD2B-204ENST00000439915 ABCC9O60706 1549 aa38.23■■■■□ 3.71
ATAD2B-204ENST00000439915 RB1CC1Q8TDY2 1594 aa36.66■■■■□ 3.46
ATAD2B-204ENST00000439915 NACADO15069 1562 aa36.51■■■■□ 3.43
ATAD2B-204ENST00000439915 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
ATAD2B-204ENST00000439915 MYO15BQ96JP2 1530 aa36.14■■■■□ 3.38
ATAD2B-204ENST00000439915 ZCCHC6Q5VYS8 1495 aaKnown RBP35.93■■■■□ 3.34
ATAD2B-204ENST00000439915 UNC13AQ9UPW8 1703 aa35.84■■■■□ 3.33
ATAD2B-204ENST00000439915 DCAF1Q9Y4B6 1507 aa35.8■■■■□ 3.32
ATAD2B-204ENST00000439915 PABPN1Q86U42 306 aaKnown RBP eCLIP35.62■■■■□ 3.29
ATAD2B-204ENST00000439915 BICRAQ9NZM4 1560 aa35.5■■■■□ 3.27
ATAD2B-204ENST00000439915 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
ATAD2B-204ENST00000439915 SCRIBQ14160 1630 aa35.23■■■■□ 3.23
ATAD2B-204ENST00000439915 SHROOM4Q9ULL8 1493 aa35.18■■■■□ 3.22
ATAD2B-204ENST00000439915 EIF4G1Q04637 1599 aaKnown RBP34.63■■■■□ 3.13
ATAD2B-204ENST00000439915 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
ATAD2B-204ENST00000439915 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
ATAD2B-204ENST00000439915 SMARCA4P51532 1647 aa33.68■■■□□ 2.98
ATAD2B-204ENST00000439915 NCAPD3P42695 1498 aa33.64■■■□□ 2.98
ATAD2B-204ENST00000439915 BAZ1AQ9NRL2 1556 aaPredicted RBP33.59■■■□□ 2.97
ATAD2B-204ENST00000439915 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
ATAD2B-204ENST00000439915 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
ATAD2B-204ENST00000439915 HMGXB3Q12766 1538 aa33.47■■■□□ 2.95
ATAD2B-204ENST00000439915 PEG3Q9GZU2 1588 aa33.37■■■□□ 2.93
ATAD2B-204ENST00000439915 BAZ1BQ9UIG0 1483 aaKnown RBP33.3■■■□□ 2.92
ATAD2B-204ENST00000439915 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
ATAD2B-204ENST00000439915 ERCC6Q03468 1493 aa33.04■■■□□ 2.88
ATAD2B-204ENST00000439915 WIZO95785 1651 aa32.95■■■□□ 2.87
ATAD2B-204ENST00000439915 NESP48681 1621 aa32.94■■■□□ 2.86
ATAD2B-204ENST00000439915 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
ATAD2B-204ENST00000439915 CUX2O14529 1486 aa32.88■■■□□ 2.85
ATAD2B-204ENST00000439915 RSF1Q96T23 1441 aaPredicted RBP32.74■■■□□ 2.83
ATAD2B-204ENST00000439915 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
ATAD2B-204ENST00000439915 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
ATAD2B-204ENST00000439915 KIF21AQ7Z4S6 1674 aa32.61■■■□□ 2.81
ATAD2B-204ENST00000439915 THOC2Q8NI27 1593 aaKnown RBP32.59■■■□□ 2.81
ATAD2B-204ENST00000439915 TOP2AP11388 1531 aaKnown RBP32.59■■■□□ 2.81
ATAD2B-204ENST00000439915 DNAJC5Q9H3Z4 198 aa32.35■■■□□ 2.77
ATAD2B-204ENST00000439915 CFTRP13569 1480 aa32.35■■■□□ 2.77
ATAD2B-204ENST00000439915 MRC2Q9UBG0 1479 aa32.33■■■□□ 2.77
ATAD2B-204ENST00000439915 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
ATAD2B-204ENST00000439915 FANCD2Q9BXW9 1451 aa32.27■■■□□ 2.76
ATAD2B-204ENST00000439915 WDR62O43379 1518 aa32.24■■■□□ 2.75
ATAD2B-204ENST00000439915 PRDM2Q13029 1718 aa32.18■■■□□ 2.74
ATAD2B-204ENST00000439915 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
ATAD2B-204ENST00000439915 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.71
ATAD2B-204ENST00000439915 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
ATAD2B-204ENST00000439915 TOPBP1Q92547 1522 aa31.7■■■□□ 2.67
ATAD2B-204ENST00000439915 DNMBPQ6XZF7 1577 aa31.65■■■□□ 2.66
ATAD2B-204ENST00000439915 IFT140Q96RY7 1462 aa31.63■■■□□ 2.65
ATAD2B-204ENST00000439915 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
ATAD2B-204ENST00000439915 ZNF608Q9ULD9 1512 aaPredicted RBP31.47■■■□□ 2.63
ATAD2B-204ENST00000439915 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
ATAD2B-204ENST00000439915 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
ATAD2B-204ENST00000439915 POLA1P09884 1462 aaPredicted RBP31.39■■■□□ 2.62
ATAD2B-204ENST00000439915 EIF4G3O43432 1585 aaKnown RBP31.38■■■□□ 2.61
ATAD2B-204ENST00000439915 CUX1P39880 1505 aa31.27■■■□□ 2.6
ATAD2B-204ENST00000439915 SOGA1O94964 1423 aa31.26■■■□□ 2.6
ATAD2B-204ENST00000439915 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
ATAD2B-204ENST00000439915 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.592e-8■□□□□ 8.7
ATAD2B-204ENST00000439915 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
ATAD2B-204ENST00000439915 WDR97A6NE52 1622 aa31.2■■■□□ 2.58
ATAD2B-204ENST00000439915 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
ATAD2B-204ENST00000439915 CHD1O14646 1710 aa31.1■■■□□ 2.57
ATAD2B-204ENST00000439915 TRIM41Q8WV44 630 aa31.07■■■□□ 2.56
ATAD2B-204ENST00000439915 FBLN2P98095 1184 aa30.98■■■□□ 2.55
ATAD2B-204ENST00000439915 GRIN2BQ13224 1484 aa30.97■■■□□ 2.55
ATAD2B-204ENST00000439915 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
ATAD2B-204ENST00000439915 RIMBP3CA6NJZ7 1639 aa30.97■■■□□ 2.55
ATAD2B-204ENST00000439915 RIMBP3BA6NNM3 1639 aa30.97■■■□□ 2.55
ATAD2B-204ENST00000439915 RIMBP3Q9UFD9 1639 aa30.97■■■□□ 2.55
ATAD2B-204ENST00000439915 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
ATAD2B-204ENST00000439915 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.54
ATAD2B-204ENST00000439915 BIVM-ERCC5R4GMW8 1640 aa30.95■■■□□ 2.54
ATAD2B-204ENST00000439915 TOP2BQ02880 1626 aa30.93■■■□□ 2.54
ATAD2B-204ENST00000439915 WRNQ14191 1432 aaPredicted RBP eCLIP30.93■■■□□ 2.54
ATAD2B-204ENST00000439915 PBRM1Q86U86 1689 aa30.92■■■□□ 2.54
ATAD2B-204ENST00000439915 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
ATAD2B-204ENST00000439915 ARHGEF11O15085 1522 aa30.89■■■□□ 2.54
ATAD2B-204ENST00000439915 ABCA5Q8WWZ7 1642 aa30.87■■■□□ 2.53
ATAD2B-204ENST00000439915 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
ATAD2B-204ENST00000439915 CHMP7Q8WUX9 453 aaPredicted RBP30.85■■■□□ 2.53
ATAD2B-204ENST00000439915 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
ATAD2B-204ENST00000439915 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
ATAD2B-204ENST00000439915 CYB5RLQ6IPT4 315 aa30.61■■■□□ 2.49
ATAD2B-204ENST00000439915 ADAMTS12P58397 1594 aa30.6■■■□□ 2.49
ATAD2B-204ENST00000439915 ARAP1Q96P48 1450 aa30.59■■■□□ 2.49
ATAD2B-204ENST00000439915 ERICH3Q5RHP9 1530 aa30.59■■■□□ 2.49
ATAD2B-204ENST00000439915 GRIN2AQ12879 1464 aa30.56■■■□□ 2.48
ATAD2B-204ENST00000439915 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
ATAD2B-204ENST00000439915 NUP160Q12769 1436 aa30.44■■■□□ 2.46
ATAD2B-204ENST00000439915 CEP170Q5SW79 1584 aa30.42■■■□□ 2.46
ATAD2B-204ENST00000439915 KIF27Q86VH2 1401 aa30.33■■■□□ 2.45
ATAD2B-204ENST00000439915 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
ATAD2B-204ENST00000439915 CUL7Q14999 1698 aa30.25■■■□□ 2.43
ATAD2B-204ENST00000439915 IGF1RP08069 1367 aa30.22■■■□□ 2.43
ATAD2B-204ENST00000439915 ERCC6L2Q5T890 1561 aa30.21■■■□□ 2.43
ATAD2B-204ENST00000439915 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
ATAD2B-204ENST00000439915 RUSC2Q8N2Y8 1516 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms