RNA–Protein interactions for RNA: ENST00000439547.5

AC108488.1-202, humanhuman

TSL 3 BASIC

Gene AC108488.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108488.1-202ENST00000439547 NISCHQ9Y2I1 1504 aa14.88□□□□□ -0.03
AC108488.1-202ENST00000439547 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
AC108488.1-202ENST00000439547 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
AC108488.1-202ENST00000439547 CCDC180Q9P1Z9 1646 aa13.34□□□□□ -0.27
AC108488.1-202ENST00000439547 ABCC9O60706 1549 aa13.14□□□□□ -0.31
AC108488.1-202ENST00000439547 RB1CC1Q8TDY2 1594 aa12.57□□□□□ -0.4
AC108488.1-202ENST00000439547 NACADO15069 1562 aa12.52□□□□□ -0.41
AC108488.1-202ENST00000439547 UNC13AQ9UPW8 1703 aa12.42□□□□□ -0.42
AC108488.1-202ENST00000439547 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
AC108488.1-202ENST00000439547 ZCCHC6Q5VYS8 1495 aaKnown RBP12.39□□□□□ -0.43
AC108488.1-202ENST00000439547 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
AC108488.1-202ENST00000439547 DCAF1Q9Y4B6 1507 aa12.29□□□□□ -0.44
AC108488.1-202ENST00000439547 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
AC108488.1-202ENST00000439547 PHF23Q9BUL5 403 aaPredicted RBP12.25□□□□□ -0.45
AC108488.1-202ENST00000439547 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC108488.1-202ENST00000439547 DNAJC5BQ9UF47 199 aa12.17□□□□□ -0.46
AC108488.1-202ENST00000439547 SCRIBQ14160 1630 aa12.16□□□□□ -0.46
AC108488.1-202ENST00000439547 SHROOM4Q9ULL8 1493 aa12.03□□□□□ -0.48
AC108488.1-202ENST00000439547 EIF4G1Q04637 1599 aaKnown RBP11.91□□□□□ -0.5
AC108488.1-202ENST00000439547 CC2D2AQ9P2K1 1620 aa11.9□□□□□ -0.5
AC108488.1-202ENST00000439547 CECR2Q9BXF3 1484 aa11.8□□□□□ -0.52
AC108488.1-202ENST00000439547 SMARCA4P51532 1647 aa11.61□□□□□ -0.55
AC108488.1-202ENST00000439547 SENP3Q9H4L4 574 aaPredicted RBP11.55□□□□□ -0.56
AC108488.1-202ENST00000439547 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
AC108488.1-202ENST00000439547 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
AC108488.1-202ENST00000439547 NCAPD3P42695 1498 aa11.53□□□□□ -0.56
AC108488.1-202ENST00000439547 SMARCA2P51531 1590 aa11.52□□□□□ -0.57
AC108488.1-202ENST00000439547 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
AC108488.1-202ENST00000439547 HMGXB3Q12766 1538 aa11.5□□□□□ -0.57
AC108488.1-202ENST00000439547 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
AC108488.1-202ENST00000439547 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
AC108488.1-202ENST00000439547 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
AC108488.1-202ENST00000439547 WIZO95785 1651 aa11.39□□□□□ -0.59
AC108488.1-202ENST00000439547 NESP48681 1621 aa11.36□□□□□ -0.59
AC108488.1-202ENST00000439547 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
AC108488.1-202ENST00000439547 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
AC108488.1-202ENST00000439547 RSF1Q96T23 1441 aaPredicted RBP11.27□□□□□ -0.6
AC108488.1-202ENST00000439547 KIF21AQ7Z4S6 1674 aa11.27□□□□□ -0.6
AC108488.1-202ENST00000439547 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
AC108488.1-202ENST00000439547 CUX2O14529 1486 aa11.24□□□□□ -0.61
AC108488.1-202ENST00000439547 TOP2AP11388 1531 aaKnown RBP11.22□□□□□ -0.61
AC108488.1-202ENST00000439547 CADPSQ9ULU8 1353 aa11.16□□□□□ -0.62
AC108488.1-202ENST00000439547 PDS5BQ9NTI5 1447 aa11.15□□□□□ -0.62
AC108488.1-202ENST00000439547 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
AC108488.1-202ENST00000439547 CFTRP13569 1480 aa11.11□□□□□ -0.63
AC108488.1-202ENST00000439547 MRC2Q9UBG0 1479 aa11.09□□□□□ -0.63
AC108488.1-202ENST00000439547 WDR62O43379 1518 aa11.09□□□□□ -0.63
AC108488.1-202ENST00000439547 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
AC108488.1-202ENST00000439547 CEP164Q9UPV0 1460 aa11.07□□□□□ -0.64
AC108488.1-202ENST00000439547 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
AC108488.1-202ENST00000439547 URB2Q14146 1524 aaKnown RBP11.01□□□□□ -0.65
AC108488.1-202ENST00000439547 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
AC108488.1-202ENST00000439547 TOPBP1Q92547 1522 aa10.9□□□□□ -0.66
AC108488.1-202ENST00000439547 DNMBPQ6XZF7 1577 aa10.89□□□□□ -0.67
AC108488.1-202ENST00000439547 ZNF608Q9ULD9 1512 aaPredicted RBP10.84□□□□□ -0.67
AC108488.1-202ENST00000439547 SUPT5HO00267 1087 aaKnown RBP10.84□□□□□ -0.67
AC108488.1-202ENST00000439547 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
AC108488.1-202ENST00000439547 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
AC108488.1-202ENST00000439547 IFT140Q96RY7 1462 aa10.83□□□□□ -0.68
AC108488.1-202ENST00000439547 EIF4G3O43432 1585 aaKnown RBP10.82□□□□□ -0.68
AC108488.1-202ENST00000439547 POLA1P09884 1462 aaPredicted RBP10.8□□□□□ -0.68
AC108488.1-202ENST00000439547 CUX1P39880 1505 aa10.79□□□□□ -0.68
AC108488.1-202ENST00000439547 FGD5Q6ZNL6 1462 aa10.75□□□□□ -0.69
AC108488.1-202ENST00000439547 RAD54L2Q9Y4B4 1467 aa10.75□□□□□ -0.69
AC108488.1-202ENST00000439547 ADRA2BP18089 450 aa10.75□□□□□ -0.69
AC108488.1-202ENST00000439547 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
AC108488.1-202ENST00000439547 CHD1O14646 1710 aa10.75□□□□□ -0.69
AC108488.1-202ENST00000439547 AQRO60306 1485 aaKnown RBP eCLIP10.74□□□□□ -0.69
AC108488.1-202ENST00000439547 SOGA1O94964 1423 aa10.7□□□□□ -0.7
AC108488.1-202ENST00000439547 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
AC108488.1-202ENST00000439547 OSCARQ8IYS5 282 aa10.68□□□□□ -0.7
AC108488.1-202ENST00000439547 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
AC108488.1-202ENST00000439547 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
AC108488.1-202ENST00000439547 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
AC108488.1-202ENST00000439547 RIMBP3CA6NJZ7 1639 aa10.66□□□□□ -0.7
AC108488.1-202ENST00000439547 RIMBP3BA6NNM3 1639 aa10.66□□□□□ -0.7
AC108488.1-202ENST00000439547 TOP2BQ02880 1626 aa10.66□□□□□ -0.7
AC108488.1-202ENST00000439547 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
AC108488.1-202ENST00000439547 RIMBP3Q9UFD9 1639 aa10.66□□□□□ -0.7
AC108488.1-202ENST00000439547 FOXD1Q16676 465 aa10.65□□□□□ -0.7
AC108488.1-202ENST00000439547 PPP6R1Q9UPN7 881 aa10.65□□□□□ -0.7
AC108488.1-202ENST00000439547 SNAPC4Q5SXM2 1469 aa10.65□□□□□ -0.7
AC108488.1-202ENST00000439547 ABCA10Q8WWZ4 1543 aa10.63□□□□□ -0.71
AC108488.1-202ENST00000439547 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.71
AC108488.1-202ENST00000439547 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
AC108488.1-202ENST00000439547 ARHGEF11O15085 1522 aa10.61□□□□□ -0.71
AC108488.1-202ENST00000439547 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
AC108488.1-202ENST00000439547 MAGI1Q96QZ7 1491 aaPredicted RBP10.61□□□□□ -0.71
AC108488.1-202ENST00000439547 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
AC108488.1-202ENST00000439547 CLASP1Q7Z460 1538 aa10.58□□□□□ -0.72
AC108488.1-202ENST00000439547 FBLN2P98095 1184 aa10.57□□□□□ -0.72
AC108488.1-202ENST00000439547 SYNJ2O15056 1496 aa10.56□□□□□ -0.72
AC108488.1-202ENST00000439547 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
AC108488.1-202ENST00000439547 KCNA4P22459 653 aa10.54□□□□□ -0.72
AC108488.1-202ENST00000439547 ARAP1Q96P48 1450 aa10.52□□□□□ -0.73
AC108488.1-202ENST00000439547 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
AC108488.1-202ENST00000439547 GRIN2AQ12879 1464 aa10.5□□□□□ -0.73
AC108488.1-202ENST00000439547 ERICH3Q5RHP9 1530 aa10.5□□□□□ -0.73
AC108488.1-202ENST00000439547 CEP170Q5SW79 1584 aa10.49□□□□□ -0.73
AC108488.1-202ENST00000439547 FHAD1B1AJZ9 1412 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms