RNA–Protein interactions for RNA: ENST00000439004.1

C1orf140-202, Transcript of Putative uncharacterized protein C1orf140, humanhuman

TSL 1 (best) BASIC

Gene C1orf140, Length 4,340 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140-202ENST00000439004 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
C1orf140-202ENST00000439004 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
C1orf140-202ENST00000439004 ABCC9O60706 1549 aa10.45□□□□□ -0.74
C1orf140-202ENST00000439004 CCDC180Q9P1Z9 1646 aa9.99□□□□□ -0.81
C1orf140-202ENST00000439004 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
C1orf140-202ENST00000439004 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
C1orf140-202ENST00000439004 PABPN1Q86U42 306 aaKnown RBP eCLIP9.9□□□□□ -0.83
C1orf140-202ENST00000439004 NACADO15069 1562 aa9.8□□□□□ -0.84
C1orf140-202ENST00000439004 ERCC6Q03468 1493 aa9.57□□□□□ -0.88
C1orf140-202ENST00000439004 SHROOM4Q9ULL8 1493 aa9.54□□□□□ -0.88
C1orf140-202ENST00000439004 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
C1orf140-202ENST00000439004 AEBP2Q6ZN18 517 aaPredicted RBP9.45□□□□□ -0.9
C1orf140-202ENST00000439004 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
C1orf140-202ENST00000439004 SCRIBQ14160 1630 aa9.43□□□□□ -0.9
C1orf140-202ENST00000439004 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
C1orf140-202ENST00000439004 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
C1orf140-202ENST00000439004 TRHP20396 242 aaPredicted RBP9.31□□□□□ -0.92
C1orf140-202ENST00000439004 PDS5BQ9NTI5 1447 aa9.3□□□□□ -0.92
C1orf140-202ENST00000439004 FBLN2P98095 1184 aa9.27□□□□□ -0.92
C1orf140-202ENST00000439004 DNAJC5BQ9UF47 199 aa9.27□□□□□ -0.93
C1orf140-202ENST00000439004 DCAF1Q9Y4B6 1507 aa9.27□□□□□ -0.93
C1orf140-202ENST00000439004 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
C1orf140-202ENST00000439004 OSCARQ8IYS5 282 aa9.22□□□□□ -0.93
C1orf140-202ENST00000439004 ZCCHC6Q5VYS8 1495 aaKnown RBP9.2□□□□□ -0.94
C1orf140-202ENST00000439004 BAZ1BQ9UIG0 1483 aaKnown RBP9.16□□□□□ -0.94
C1orf140-202ENST00000439004 SMARCA2P51531 1590 aa9.15□□□□□ -0.94
C1orf140-202ENST00000439004 CUX2O14529 1486 aa9.13□□□□□ -0.95
C1orf140-202ENST00000439004 CHMP7Q8WUX9 453 aaPredicted RBP9.12□□□□□ -0.95
C1orf140-202ENST00000439004 EIF4G1Q04637 1599 aaKnown RBP9.08□□□□□ -0.96
C1orf140-202ENST00000439004 SLC24A1O60721 1099 aa9.07□□□□□ -0.96
C1orf140-202ENST00000439004 CC2D2AQ9P2K1 1620 aa9.06□□□□□ -0.96
C1orf140-202ENST00000439004 MYT1LQ9UL68 1186 aa9.02□□□□□ -0.97
C1orf140-202ENST00000439004 SUPT5HO00267 1087 aaKnown RBP9.01□□□□□ -0.97
C1orf140-202ENST00000439004 BAZ1AQ9NRL2 1556 aaPredicted RBP9□□□□□ -0.97
C1orf140-202ENST00000439004 ESF1Q9H501 851 aaKnown RBP8.98□□□□□ -0.97
C1orf140-202ENST00000439004 NCAPD3P42695 1498 aa8.97□□□□□ -0.97
C1orf140-202ENST00000439004 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
C1orf140-202ENST00000439004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.95□□□□□ -0.98
C1orf140-202ENST00000439004 HNRNPUL2Q1KMD3 747 aaKnown RBP8.95□□□□□ -0.98
C1orf140-202ENST00000439004 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
C1orf140-202ENST00000439004 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
C1orf140-202ENST00000439004 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
C1orf140-202ENST00000439004 ATAD2BQ9ULI0 1458 aa8.88□□□□□ -0.99
C1orf140-202ENST00000439004 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
C1orf140-202ENST00000439004 MRC2Q9UBG0 1479 aa8.87□□□□□ -0.99
C1orf140-202ENST00000439004 APLP2Q06481 763 aa8.84□□□□□ -0.99
C1orf140-202ENST00000439004 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
C1orf140-202ENST00000439004 HMGXB3Q12766 1538 aa8.82□□□□□ -1
C1orf140-202ENST00000439004 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
C1orf140-202ENST00000439004 CHIC1Q5VXU3 224 aa8.8□□□□□ -1
C1orf140-202ENST00000439004 BICRAQ9NZM4 1560 aa8.8□□□□□ -1
C1orf140-202ENST00000439004 ATP1B4Q9UN42 357 aaPredicted RBP8.79□□□□□ -1
C1orf140-202ENST00000439004 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
C1orf140-202ENST00000439004 FANCD2Q9BXW9 1451 aa8.76□□□□□ -1.01
C1orf140-202ENST00000439004 IFT140Q96RY7 1462 aa8.75□□□□□ -1.01
C1orf140-202ENST00000439004 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
C1orf140-202ENST00000439004 CARMIL2Q6F5E8 1435 aa8.72□□□□□ -1.01
C1orf140-202ENST00000439004 FOXD1Q16676 465 aa8.72□□□□□ -1.01
C1orf140-202ENST00000439004 SMARCA4P51532 1647 aa8.68□□□□□ -1.02
C1orf140-202ENST00000439004 SOGA1O94964 1423 aa8.68□□□□□ -1.02
C1orf140-202ENST00000439004 WRNQ14191 1432 aaPredicted RBP eCLIP8.64□□□□□ -1.03
C1orf140-202ENST00000439004 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
C1orf140-202ENST00000439004 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
C1orf140-202ENST00000439004 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
C1orf140-202ENST00000439004 DMRT2Q9Y5R5 561 aa8.58□□□□□ -1.04
C1orf140-202ENST00000439004 PLEKHD1A6NEE1 506 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 NESP48681 1621 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 MROH2BQ7Z745 1585 aa8.57□□□□□ -1.04
C1orf140-202ENST00000439004 GRIN2BQ13224 1484 aa8.56□□□□□ -1.04
C1orf140-202ENST00000439004 PLPPR3Q6T4P5 718 aa8.56□□□□□ -1.04
C1orf140-202ENST00000439004 TDRD9Q8NDG6 1382 aaKnown RBP8.56□□□□□ -1.04
C1orf140-202ENST00000439004 JPH4Q96JJ6 628 aa8.55□□□□□ -1.04
C1orf140-202ENST00000439004 UNC13AQ9UPW8 1703 aa8.55□□□□□ -1.04
C1orf140-202ENST00000439004 RANGAP1P46060 587 aaPredicted RBP8.55□□□□□ -1.04
C1orf140-202ENST00000439004 SYNJ1O43426 1573 aa8.54□□□□□ -1.04
C1orf140-202ENST00000439004 KIF27Q86VH2 1401 aa8.54□□□□□ -1.04
C1orf140-202ENST00000439004 CFTRP13569 1480 aa8.53□□□□□ -1.04
C1orf140-202ENST00000439004 KCNH8Q96L42 1107 aa8.53□□□□□ -1.04
C1orf140-202ENST00000439004 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
C1orf140-202ENST00000439004 POGZQ7Z3K3 1410 aa8.51□□□□□ -1.05
C1orf140-202ENST00000439004 BCANQ96GW7 911 aa8.5□□□□□ -1.05
C1orf140-202ENST00000439004 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
C1orf140-202ENST00000439004 PTPRGP23470 1445 aa8.49□□□□□ -1.05
C1orf140-202ENST00000439004 MAGI1Q96QZ7 1491 aaPredicted RBP8.49□□□□□ -1.05
C1orf140-202ENST00000439004 PHF23Q9BUL5 403 aaPredicted RBP8.48□□□□□ -1.05
C1orf140-202ENST00000439004 SCAF1Q9H7N4 1312 aaKnown RBP8.47□□□□□ -1.05
C1orf140-202ENST00000439004 GAPVD1Q14C86 1478 aa8.47□□□□□ -1.05
C1orf140-202ENST00000439004 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
C1orf140-202ENST00000439004 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
C1orf140-202ENST00000439004 FHAD1B1AJZ9 1412 aa8.44□□□□□ -1.06
C1orf140-202ENST00000439004 TEX14Q8IWB6 1497 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 WDR62O43379 1518 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
C1orf140-202ENST00000439004 SYNJ2O15056 1496 aa8.42□□□□□ -1.06
C1orf140-202ENST00000439004 AQRO60306 1485 aaKnown RBP eCLIP8.41□□□□□ -1.06
C1orf140-202ENST00000439004 TOPBP1Q92547 1522 aa8.41□□□□□ -1.06
C1orf140-202ENST00000439004 DNMBPQ6XZF7 1577 aa8.41□□□□□ -1.06
C1orf140-202ENST00000439004 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.06
C1orf140-202ENST00000439004 EFCAB2Q5VUJ9 269 aa8.4□□□□□ -1.07
C1orf140-202ENST00000439004 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms