RNA–Protein interactions for RNA: ENST00000438925.6

MMS19-209, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMS19, Length 3,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-209ENST00000438925 NISCHQ9Y2I1 1504 aa23.3■■□□□ 1.32
MMS19-209ENST00000438925 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
MMS19-209ENST00000438925 ABCC9O60706 1549 aa20.09■□□□□ 0.81
MMS19-209ENST00000438925 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
MMS19-209ENST00000438925 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
MMS19-209ENST00000438925 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
MMS19-209ENST00000438925 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
MMS19-209ENST00000438925 NACADO15069 1562 aa19.33■□□□□ 0.69
MMS19-209ENST00000438925 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
MMS19-209ENST00000438925 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
MMS19-209ENST00000438925 SUPT5HO00267 1087 aaKnown RBP18.92■□□□□ 0.62
MMS19-209ENST00000438925 PABPN1Q86U42 306 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■■■□ 19.9
MMS19-209ENST00000438925 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
MMS19-209ENST00000438925 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
MMS19-209ENST00000438925 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
MMS19-209ENST00000438925 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
MMS19-209ENST00000438925 CECR2Q9BXF3 1484 aa18.15■□□□□ 0.5
MMS19-209ENST00000438925 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
MMS19-209ENST00000438925 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
MMS19-209ENST00000438925 PELP1Q8IZL8 1130 aaKnown RBP18.1■□□□□ 0.49
MMS19-209ENST00000438925 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.49
MMS19-209ENST00000438925 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
MMS19-209ENST00000438925 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
MMS19-209ENST00000438925 SMARCA4P51532 1647 aa18■□□□□ 0.47
MMS19-209ENST00000438925 CHIC1Q5VXU3 224 aa17.94■□□□□ 0.46
MMS19-209ENST00000438925 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
MMS19-209ENST00000438925 ATAD2BQ9ULI0 1458 aa17.9■□□□□ 0.46
MMS19-209ENST00000438925 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
MMS19-209ENST00000438925 WIZO95785 1651 aa17.88■□□□□ 0.45
MMS19-209ENST00000438925 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
MMS19-209ENST00000438925 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
MMS19-209ENST00000438925 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
MMS19-209ENST00000438925 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
MMS19-209ENST00000438925 MYT1Q01538 1121 aa17.64■□□□□ 0.42
MMS19-209ENST00000438925 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
MMS19-209ENST00000438925 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
MMS19-209ENST00000438925 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
MMS19-209ENST00000438925 HRCP23327 699 aa17.48■□□□□ 0.39
MMS19-209ENST00000438925 EHMT2Q96KQ7 1210 aa17.45■□□□□ 0.38
MMS19-209ENST00000438925 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
MMS19-209ENST00000438925 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
MMS19-209ENST00000438925 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
MMS19-209ENST00000438925 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
MMS19-209ENST00000438925 NESP48681 1621 aa17.35■□□□□ 0.37
MMS19-209ENST00000438925 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
MMS19-209ENST00000438925 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.36
MMS19-209ENST00000438925 ABCC8Q09428 1581 aa17.29■□□□□ 0.36
MMS19-209ENST00000438925 CFTRP13569 1480 aa17.27■□□□□ 0.36
MMS19-209ENST00000438925 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
MMS19-209ENST00000438925 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
MMS19-209ENST00000438925 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
MMS19-209ENST00000438925 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
MMS19-209ENST00000438925 MRC2Q9UBG0 1479 aa17.09■□□□□ 0.33
MMS19-209ENST00000438925 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
MMS19-209ENST00000438925 SOGA1O94964 1423 aa17.02■□□□□ 0.32
MMS19-209ENST00000438925 PRDM2Q13029 1718 aa17■□□□□ 0.31
MMS19-209ENST00000438925 UBTFP17480 764 aaKnown RBP16.99■□□□□ 0.31
MMS19-209ENST00000438925 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
MMS19-209ENST00000438925 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
MMS19-209ENST00000438925 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
MMS19-209ENST00000438925 CUX2O14529 1486 aa16.94■□□□□ 0.3
MMS19-209ENST00000438925 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
MMS19-209ENST00000438925 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
MMS19-209ENST00000438925 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
MMS19-209ENST00000438925 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
MMS19-209ENST00000438925 WDR62O43379 1518 aa16.89■□□□□ 0.29
MMS19-209ENST00000438925 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
MMS19-209ENST00000438925 EEA1Q15075 1411 aa16.88■□□□□ 0.29
MMS19-209ENST00000438925 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
MMS19-209ENST00000438925 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
MMS19-209ENST00000438925 FGD5Q6ZNL6 1462 aa16.83■□□□□ 0.28
MMS19-209ENST00000438925 CUX1P39880 1505 aa16.82■□□□□ 0.28
MMS19-209ENST00000438925 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
MMS19-209ENST00000438925 POLA1P09884 1462 aaPredicted RBP16.79■□□□□ 0.28
MMS19-209ENST00000438925 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
MMS19-209ENST00000438925 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
MMS19-209ENST00000438925 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
MMS19-209ENST00000438925 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
MMS19-209ENST00000438925 FBLN2P98095 1184 aa16.74■□□□□ 0.27
MMS19-209ENST00000438925 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
MMS19-209ENST00000438925 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
MMS19-209ENST00000438925 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
MMS19-209ENST00000438925 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
MMS19-209ENST00000438925 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.263e-9■■■■■ 36.3
MMS19-209ENST00000438925 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
MMS19-209ENST00000438925 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.26
MMS19-209ENST00000438925 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
MMS19-209ENST00000438925 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
MMS19-209ENST00000438925 GAPVD1Q14C86 1478 aa16.63■□□□□ 0.25
MMS19-209ENST00000438925 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
MMS19-209ENST00000438925 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
MMS19-209ENST00000438925 KIF21BO75037 1637 aa16.58■□□□□ 0.24
MMS19-209ENST00000438925 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
MMS19-209ENST00000438925 APLP2Q06481 763 aa16.56■□□□□ 0.24
MMS19-209ENST00000438925 CLIP1P30622 1438 aa16.56■□□□□ 0.24
MMS19-209ENST00000438925 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
MMS19-209ENST00000438925 OSCARQ8IYS5 282 aa16.52■□□□□ 0.23
MMS19-209ENST00000438925 IGF1RP08069 1367 aa16.51■□□□□ 0.23
MMS19-209ENST00000438925 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
MMS19-209ENST00000438925 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms