RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
MTA1-208ENST00000438610 CCDC180Q9P1Z9 1646 aa36.94■■■■□ 3.5
MTA1-208ENST00000438610 ZCCHC6Q5VYS8 1495 aaKnown RBP35.49■■■■□ 3.27
MTA1-208ENST00000438610 DCAF1Q9Y4B6 1507 aa35.03■■■■□ 3.2
MTA1-208ENST00000438610 ABCC9O60706 1549 aa35.01■■■■□ 3.19
MTA1-208ENST00000438610 DCAF8L2P0C7V8 631 aa34.94■■■■□ 3.18
MTA1-208ENST00000438610 MYO15BQ96JP2 1530 aa34.69■■■■□ 3.14
MTA1-208ENST00000438610 NACADO15069 1562 aa34.48■■■■□ 3.11
MTA1-208ENST00000438610 SHROOM4Q9ULL8 1493 aa34.3■■■■□ 3.08
MTA1-208ENST00000438610 RB1CC1Q8TDY2 1594 aa34.18■■■■□ 3.06
MTA1-208ENST00000438610 SCRIBQ14160 1630 aa33.88■■■■□ 3.01
MTA1-208ENST00000438610 UNC13AQ9UPW8 1703 aa33.41■■■□□ 2.94
MTA1-208ENST00000438610 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
MTA1-208ENST00000438610 PABPN1Q86U42 306 aaKnown RBP eCLIP33.01■■■□□ 2.889e-7■■□□□ 14.3
MTA1-208ENST00000438610 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
MTA1-208ENST00000438610 CECR2Q9BXF3 1484 aa32.84■■■□□ 2.85
MTA1-208ENST00000438610 RSF1Q96T23 1441 aaPredicted RBP32.76■■■□□ 2.83
MTA1-208ENST00000438610 BAZ1AQ9NRL2 1556 aaPredicted RBP32.67■■■□□ 2.82
MTA1-208ENST00000438610 MROH2BQ7Z745 1585 aa32.64■■■□□ 2.81
MTA1-208ENST00000438610 SMARCA4P51532 1647 aa32.51■■■□□ 2.8
MTA1-208ENST00000438610 WIZO95785 1651 aa32.33■■■□□ 2.77
MTA1-208ENST00000438610 PEG3Q9GZU2 1588 aa32.17■■■□□ 2.74
MTA1-208ENST00000438610 EIF4G1Q04637 1599 aaKnown RBP32.14■■■□□ 2.74
MTA1-208ENST00000438610 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
MTA1-208ENST00000438610 TOP2AP11388 1531 aaKnown RBP32.04■■■□□ 2.72
MTA1-208ENST00000438610 SMARCA2P51531 1590 aa32.04■■■□□ 2.72
MTA1-208ENST00000438610 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
MTA1-208ENST00000438610 BAZ1BQ9UIG0 1483 aaKnown RBP31.84■■■□□ 2.69
MTA1-208ENST00000438610 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
MTA1-208ENST00000438610 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
MTA1-208ENST00000438610 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
MTA1-208ENST00000438610 CHIC1Q5VXU3 224 aa31.55■■■□□ 2.64
MTA1-208ENST00000438610 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
MTA1-208ENST00000438610 CFTRP13569 1480 aa31.07■■■□□ 2.56
MTA1-208ENST00000438610 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
MTA1-208ENST00000438610 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
MTA1-208ENST00000438610 ABCC8Q09428 1581 aa30.94■■■□□ 2.54
MTA1-208ENST00000438610 WRNQ14191 1432 aaPredicted RBP eCLIP30.84■■■□□ 2.539e-6■■■■■ 50.1
MTA1-208ENST00000438610 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
MTA1-208ENST00000438610 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
MTA1-208ENST00000438610 NESP48681 1621 aa30.68■■■□□ 2.5
MTA1-208ENST00000438610 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
MTA1-208ENST00000438610 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
MTA1-208ENST00000438610 TOP2BQ02880 1626 aa30.59■■■□□ 2.49
MTA1-208ENST00000438610 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
MTA1-208ENST00000438610 PDS5BQ9NTI5 1447 aa30.55■■■□□ 2.48
MTA1-208ENST00000438610 CUX1P39880 1505 aa30.52■■■□□ 2.48
MTA1-208ENST00000438610 CEP164Q9UPV0 1460 aa30.43■■■□□ 2.46
MTA1-208ENST00000438610 FAM9AQ8IZU1 332 aaPredicted RBP30.43■■■□□ 2.46
MTA1-208ENST00000438610 SOGA1O94964 1423 aa30.37■■■□□ 2.45
MTA1-208ENST00000438610 EEA1Q15075 1411 aa30.37■■■□□ 2.45
MTA1-208ENST00000438610 DNMBPQ6XZF7 1577 aa30.31■■■□□ 2.44
MTA1-208ENST00000438610 LOC105371045A0A1W2PR82 267 aa30.31■■■□□ 2.44
MTA1-208ENST00000438610 KIF21AQ7Z4S6 1674 aa30.29■■■□□ 2.44
MTA1-208ENST00000438610 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
MTA1-208ENST00000438610 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
MTA1-208ENST00000438610 URB2Q14146 1524 aaKnown RBP30.23■■■□□ 2.43
MTA1-208ENST00000438610 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
MTA1-208ENST00000438610 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
MTA1-208ENST00000438610 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
MTA1-208ENST00000438610 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
MTA1-208ENST00000438610 KIF27Q86VH2 1401 aa30.1■■■□□ 2.41
MTA1-208ENST00000438610 ERCC6Q03468 1493 aa30.06■■■□□ 2.4
MTA1-208ENST00000438610 CUX2O14529 1486 aa30■■■□□ 2.39
MTA1-208ENST00000438610 ABCA10Q8WWZ4 1543 aa29.99■■■□□ 2.39
MTA1-208ENST00000438610 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
MTA1-208ENST00000438610 WDR62O43379 1518 aa29.95■■■□□ 2.39
MTA1-208ENST00000438610 EHMT2Q96KQ7 1210 aa29.94■■■□□ 2.38
MTA1-208ENST00000438610 KIF21BO75037 1637 aa29.92■■■□□ 2.38
MTA1-208ENST00000438610 GOLGA3Q08378 1498 aa29.89■■■□□ 2.38
MTA1-208ENST00000438610 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
MTA1-208ENST00000438610 IGF1RP08069 1367 aa29.85■■■□□ 2.37
MTA1-208ENST00000438610 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
MTA1-208ENST00000438610 WDR97A6NE52 1622 aa29.83■■■□□ 2.37
MTA1-208ENST00000438610 TARBP1Q13395 1621 aaKnown RBP29.82■■■□□ 2.36
MTA1-208ENST00000438610 TNIKQ9UKE5 1360 aa29.81■■■□□ 2.36
MTA1-208ENST00000438610 UBTFP17480 764 aaKnown RBP29.78■■■□□ 2.36
MTA1-208ENST00000438610 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
MTA1-208ENST00000438610 RAPGEF2Q9Y4G8 1499 aa29.77■■■□□ 2.36
MTA1-208ENST00000438610 IFT140Q96RY7 1462 aa29.75■■■□□ 2.35
MTA1-208ENST00000438610 TDRD9Q8NDG6 1382 aaKnown RBP29.73■■■□□ 2.35
MTA1-208ENST00000438610 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
MTA1-208ENST00000438610 CARMIL1Q5VZK9 1371 aa29.69■■■□□ 2.34
MTA1-208ENST00000438610 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
MTA1-208ENST00000438610 CUL7Q14999 1698 aa29.59■■■□□ 2.33
MTA1-208ENST00000438610 CEP162Q5TB80 1403 aa29.58■■■□□ 2.33
MTA1-208ENST00000438610 AQRO60306 1485 aaKnown RBP eCLIP29.56■■■□□ 2.328e-8■■■■□ 22.9
MTA1-208ENST00000438610 ZNF608Q9ULD9 1512 aaPredicted RBP29.53■■■□□ 2.32
MTA1-208ENST00000438610 GRIN2BQ13224 1484 aa29.5■■■□□ 2.31
MTA1-208ENST00000438610 PBRM1Q86U86 1689 aa29.46■■■□□ 2.31
MTA1-208ENST00000438610 EIF4G3O43432 1585 aaKnown RBP29.41■■■□□ 2.3
MTA1-208ENST00000438610 CLIP1P30622 1438 aa29.41■■■□□ 2.3
MTA1-208ENST00000438610 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
MTA1-208ENST00000438610 ADAMTS12P58397 1594 aa29.32■■■□□ 2.28
MTA1-208ENST00000438610 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
MTA1-208ENST00000438610 MAGI1Q96QZ7 1491 aaPredicted RBP29.27■■■□□ 2.28
MTA1-208ENST00000438610 RANGAP1P46060 587 aaPredicted RBP29.24■■■□□ 2.27
MTA1-208ENST00000438610 CTTNBP2Q8WZ74 1663 aa29.19■■■□□ 2.26
MTA1-208ENST00000438610 ARHGAP35Q9NRY4 1499 aa29.15■■■□□ 2.26
MTA1-208ENST00000438610 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms