RNA–Protein interactions for RNA: ENST00000438026.1

AC108879.1-201, humanhuman

TSL 3 BASIC

Gene AC108879.1, Length 828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108879.1-201ENST00000438026 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
AC108879.1-201ENST00000438026 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
AC108879.1-201ENST00000438026 ABCC9O60706 1549 aa27.43■■□□□ 1.98
AC108879.1-201ENST00000438026 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
AC108879.1-201ENST00000438026 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
AC108879.1-201ENST00000438026 NACADO15069 1562 aa26.45■■□□□ 1.82
AC108879.1-201ENST00000438026 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
AC108879.1-201ENST00000438026 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
AC108879.1-201ENST00000438026 DCAF1Q9Y4B6 1507 aa26.21■■□□□ 1.79
AC108879.1-201ENST00000438026 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
AC108879.1-201ENST00000438026 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
AC108879.1-201ENST00000438026 SCRIBQ14160 1630 aa25.56■■□□□ 1.68
AC108879.1-201ENST00000438026 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
AC108879.1-201ENST00000438026 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
AC108879.1-201ENST00000438026 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
AC108879.1-201ENST00000438026 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
AC108879.1-201ENST00000438026 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
AC108879.1-201ENST00000438026 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
AC108879.1-201ENST00000438026 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
AC108879.1-201ENST00000438026 SMARCA4P51532 1647 aa24.48■■□□□ 1.51
AC108879.1-201ENST00000438026 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
AC108879.1-201ENST00000438026 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
AC108879.1-201ENST00000438026 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
AC108879.1-201ENST00000438026 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
AC108879.1-201ENST00000438026 PEG3Q9GZU2 1588 aa24.28■■□□□ 1.48
AC108879.1-201ENST00000438026 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
AC108879.1-201ENST00000438026 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
AC108879.1-201ENST00000438026 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
AC108879.1-201ENST00000438026 WIZO95785 1651 aa23.99■■□□□ 1.43
AC108879.1-201ENST00000438026 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
AC108879.1-201ENST00000438026 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
AC108879.1-201ENST00000438026 ERCC6Q03468 1493 aa23.74■■□□□ 1.39
AC108879.1-201ENST00000438026 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
AC108879.1-201ENST00000438026 NESP48681 1621 aa23.7■■□□□ 1.38
AC108879.1-201ENST00000438026 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
AC108879.1-201ENST00000438026 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
AC108879.1-201ENST00000438026 CFTRP13569 1480 aa23.56■■□□□ 1.36
AC108879.1-201ENST00000438026 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
AC108879.1-201ENST00000438026 CUX2O14529 1486 aa23.49■■□□□ 1.35
AC108879.1-201ENST00000438026 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
AC108879.1-201ENST00000438026 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
AC108879.1-201ENST00000438026 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
AC108879.1-201ENST00000438026 MRC2Q9UBG0 1479 aa23.35■■□□□ 1.33
AC108879.1-201ENST00000438026 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
AC108879.1-201ENST00000438026 WDR62O43379 1518 aa23.23■■□□□ 1.31
AC108879.1-201ENST00000438026 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
AC108879.1-201ENST00000438026 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
AC108879.1-201ENST00000438026 URB2Q14146 1524 aaKnown RBP23.11■■□□□ 1.29
AC108879.1-201ENST00000438026 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
AC108879.1-201ENST00000438026 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
AC108879.1-201ENST00000438026 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
AC108879.1-201ENST00000438026 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
AC108879.1-201ENST00000438026 CUX1P39880 1505 aa22.8■■□□□ 1.24
AC108879.1-201ENST00000438026 SOGA1O94964 1423 aa22.78■■□□□ 1.24
AC108879.1-201ENST00000438026 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
AC108879.1-201ENST00000438026 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
AC108879.1-201ENST00000438026 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
AC108879.1-201ENST00000438026 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
AC108879.1-201ENST00000438026 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
AC108879.1-201ENST00000438026 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
AC108879.1-201ENST00000438026 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
AC108879.1-201ENST00000438026 TOP2BQ02880 1626 aa22.64■■□□□ 1.22
AC108879.1-201ENST00000438026 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.21
AC108879.1-201ENST00000438026 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
AC108879.1-201ENST00000438026 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
AC108879.1-201ENST00000438026 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
AC108879.1-201ENST00000438026 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
AC108879.1-201ENST00000438026 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
AC108879.1-201ENST00000438026 OSCARQ8IYS5 282 aa22.56■■□□□ 1.2
AC108879.1-201ENST00000438026 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
AC108879.1-201ENST00000438026 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
AC108879.1-201ENST00000438026 MAGI1Q96QZ7 1491 aaPredicted RBP22.46■■□□□ 1.19
AC108879.1-201ENST00000438026 FBLN2P98095 1184 aa22.43■■□□□ 1.18
AC108879.1-201ENST00000438026 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
AC108879.1-201ENST00000438026 CHMP7Q8WUX9 453 aaPredicted RBP22.42■■□□□ 1.18
AC108879.1-201ENST00000438026 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
AC108879.1-201ENST00000438026 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
AC108879.1-201ENST00000438026 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
AC108879.1-201ENST00000438026 ERICH3Q5RHP9 1530 aa22.32■■□□□ 1.16
AC108879.1-201ENST00000438026 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
AC108879.1-201ENST00000438026 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
AC108879.1-201ENST00000438026 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
AC108879.1-201ENST00000438026 CHD1O14646 1710 aa22.26■■□□□ 1.15
AC108879.1-201ENST00000438026 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
AC108879.1-201ENST00000438026 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
AC108879.1-201ENST00000438026 IGF1RP08069 1367 aa22.18■■□□□ 1.14
AC108879.1-201ENST00000438026 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
AC108879.1-201ENST00000438026 NUP160Q12769 1436 aa22.1■■□□□ 1.13
AC108879.1-201ENST00000438026 CUL7Q14999 1698 aa22.09■■□□□ 1.13
AC108879.1-201ENST00000438026 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
AC108879.1-201ENST00000438026 ARHGEF11O15085 1522 aa22.07■■□□□ 1.12
AC108879.1-201ENST00000438026 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
AC108879.1-201ENST00000438026 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
AC108879.1-201ENST00000438026 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
AC108879.1-201ENST00000438026 CEP170Q5SW79 1584 aa22■■□□□ 1.11
AC108879.1-201ENST00000438026 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
AC108879.1-201ENST00000438026 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
AC108879.1-201ENST00000438026 EEA1Q15075 1411 aa21.95■■□□□ 1.1
AC108879.1-201ENST00000438026 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
AC108879.1-201ENST00000438026 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms