RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
EXT1-203ENST00000437196 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
EXT1-203ENST00000437196 ABCC9O60706 1549 aa27.06■■□□□ 1.92
EXT1-203ENST00000437196 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
EXT1-203ENST00000437196 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
EXT1-203ENST00000437196 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
EXT1-203ENST00000437196 NACADO15069 1562 aa26.37■■□□□ 1.81
EXT1-203ENST00000437196 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
EXT1-203ENST00000437196 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
EXT1-203ENST00000437196 SCRIBQ14160 1630 aa25.64■■□□□ 1.7
EXT1-203ENST00000437196 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
EXT1-203ENST00000437196 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
EXT1-203ENST00000437196 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.65
EXT1-203ENST00000437196 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
EXT1-203ENST00000437196 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
EXT1-203ENST00000437196 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
EXT1-203ENST00000437196 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
EXT1-203ENST00000437196 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
EXT1-203ENST00000437196 CC2D2AQ9P2K1 1620 aa24.51■■□□□ 1.51
EXT1-203ENST00000437196 MROH2BQ7Z745 1585 aa24.48■■□□□ 1.51
EXT1-203ENST00000437196 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
EXT1-203ENST00000437196 RSF1Q96T23 1441 aaPredicted RBP24.38■■□□□ 1.49
EXT1-203ENST00000437196 PEG3Q9GZU2 1588 aa24.37■■□□□ 1.49
EXT1-203ENST00000437196 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
EXT1-203ENST00000437196 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
EXT1-203ENST00000437196 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
EXT1-203ENST00000437196 WIZO95785 1651 aa24.25■■□□□ 1.47
EXT1-203ENST00000437196 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
EXT1-203ENST00000437196 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
EXT1-203ENST00000437196 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
EXT1-203ENST00000437196 TOP2AP11388 1531 aaKnown RBP24.07■■□□□ 1.44
EXT1-203ENST00000437196 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
EXT1-203ENST00000437196 CADPSQ9ULU8 1353 aa23.62■■□□□ 1.37
EXT1-203ENST00000437196 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
EXT1-203ENST00000437196 CFTRP13569 1480 aa23.56■■□□□ 1.36
EXT1-203ENST00000437196 NESP48681 1621 aa23.5■■□□□ 1.35
EXT1-203ENST00000437196 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
EXT1-203ENST00000437196 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
EXT1-203ENST00000437196 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
EXT1-203ENST00000437196 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
EXT1-203ENST00000437196 CEP164Q9UPV0 1460 aa23.29■■□□□ 1.32
EXT1-203ENST00000437196 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
EXT1-203ENST00000437196 MRC2Q9UBG0 1479 aa23.15■■□□□ 1.3
EXT1-203ENST00000437196 ABCC8Q09428 1581 aa23.12■■□□□ 1.29
EXT1-203ENST00000437196 THOC2Q8NI27 1593 aaKnown RBP23.09■■□□□ 1.29
EXT1-203ENST00000437196 WDR62O43379 1518 aa23.05■■□□□ 1.28
EXT1-203ENST00000437196 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
EXT1-203ENST00000437196 URB2Q14146 1524 aaKnown RBP23.03■■□□□ 1.28
EXT1-203ENST00000437196 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
EXT1-203ENST00000437196 TOPBP1Q92547 1522 aa23■■□□□ 1.27
EXT1-203ENST00000437196 CUX2O14529 1486 aa22.96■■□□□ 1.27
EXT1-203ENST00000437196 CUX1P39880 1505 aa22.95■■□□□ 1.26
EXT1-203ENST00000437196 TOP2BQ02880 1626 aa22.92■■□□□ 1.26
EXT1-203ENST00000437196 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
EXT1-203ENST00000437196 SYNJ1O43426 1573 aa22.88■■□□□ 1.25
EXT1-203ENST00000437196 FGD5Q6ZNL6 1462 aa22.83■■□□□ 1.25
EXT1-203ENST00000437196 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
EXT1-203ENST00000437196 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
EXT1-203ENST00000437196 IFT140Q96RY7 1462 aa22.79■■□□□ 1.24
EXT1-203ENST00000437196 SOGA1O94964 1423 aa22.77■■□□□ 1.24
EXT1-203ENST00000437196 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
EXT1-203ENST00000437196 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.23
EXT1-203ENST00000437196 RAD54L2Q9Y4B4 1467 aa22.68■■□□□ 1.22
EXT1-203ENST00000437196 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
EXT1-203ENST00000437196 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
EXT1-203ENST00000437196 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
EXT1-203ENST00000437196 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
EXT1-203ENST00000437196 EIF4G3O43432 1585 aaKnown RBP22.54■■□□□ 1.2
EXT1-203ENST00000437196 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
EXT1-203ENST00000437196 AQRO60306 1485 aaKnown RBP eCLIP22.51■■□□□ 1.19
EXT1-203ENST00000437196 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
EXT1-203ENST00000437196 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
EXT1-203ENST00000437196 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
EXT1-203ENST00000437196 EEA1Q15075 1411 aa22.43■■□□□ 1.18
EXT1-203ENST00000437196 PBRM1Q86U86 1689 aa22.43■■□□□ 1.18
EXT1-203ENST00000437196 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
EXT1-203ENST00000437196 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
EXT1-203ENST00000437196 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
EXT1-203ENST00000437196 IGF1RP08069 1367 aa22.33■■□□□ 1.17
EXT1-203ENST00000437196 RUSC2Q8N2Y8 1516 aa22.33■■□□□ 1.17
EXT1-203ENST00000437196 CUL7Q14999 1698 aa22.31■■□□□ 1.16
EXT1-203ENST00000437196 FHAD1B1AJZ9 1412 aa22.29■■□□□ 1.16
EXT1-203ENST00000437196 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
EXT1-203ENST00000437196 SYNJ2O15056 1496 aa22.27■■□□□ 1.16
EXT1-203ENST00000437196 ADAMTS12P58397 1594 aa22.27■■□□□ 1.15
EXT1-203ENST00000437196 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
EXT1-203ENST00000437196 CARMIL1Q5VZK9 1371 aa22.24■■□□□ 1.15
EXT1-203ENST00000437196 FAM9AQ8IZU1 332 aaPredicted RBP22.23■■□□□ 1.15
EXT1-203ENST00000437196 FBLN2P98095 1184 aa22.21■■□□□ 1.15
EXT1-203ENST00000437196 CHD1O14646 1710 aa22.17■■□□□ 1.14
EXT1-203ENST00000437196 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
EXT1-203ENST00000437196 GRIN2AQ12879 1464 aa22.16■■□□□ 1.14
EXT1-203ENST00000437196 PRXQ9BXM0 1461 aa22.16■■□□□ 1.14
EXT1-203ENST00000437196 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
EXT1-203ENST00000437196 KIF21BO75037 1637 aa22.1■■□□□ 1.13
EXT1-203ENST00000437196 NUP160Q12769 1436 aa22.03■■□□□ 1.12
EXT1-203ENST00000437196 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
EXT1-203ENST00000437196 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
EXT1-203ENST00000437196 KIAA0586Q9BVV6 1533 aa21.96■■□□□ 1.11
EXT1-203ENST00000437196 CTTNBP2Q8WZ74 1663 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms