RNA–Protein interactions for RNA: ENST00000436928.7

SENP6-204, Transcript of SUMO specific peptidase 6, humanhuman

TSL 5

Gene SENP6, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-204ENST00000436928 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
SENP6-204ENST00000436928 ABCC9O60706 1549 aa31.75■■■□□ 2.67
SENP6-204ENST00000436928 CCDC180Q9P1Z9 1646 aa31.52■■■□□ 2.64
SENP6-204ENST00000436928 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
SENP6-204ENST00000436928 DNAJC5BQ9UF47 199 aa30.05■■■□□ 2.4
SENP6-204ENST00000436928 NACADO15069 1562 aa29.75■■■□□ 2.35
SENP6-204ENST00000436928 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
SENP6-204ENST00000436928 PABPN1Q86U42 306 aaKnown RBP eCLIP29.4■■■□□ 2.3
SENP6-204ENST00000436928 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
SENP6-204ENST00000436928 BICRAQ9NZM4 1560 aa29.31■■■□□ 2.28
SENP6-204ENST00000436928 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.26
SENP6-204ENST00000436928 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
SENP6-204ENST00000436928 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
SENP6-204ENST00000436928 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
SENP6-204ENST00000436928 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
SENP6-204ENST00000436928 SCRIBQ14160 1630 aa28.7■■■□□ 2.19
SENP6-204ENST00000436928 CECR2Q9BXF3 1484 aa28.59■■■□□ 2.17
SENP6-204ENST00000436928 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
SENP6-204ENST00000436928 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
SENP6-204ENST00000436928 CUX2O14529 1486 aa27.46■■□□□ 1.99
SENP6-204ENST00000436928 NCAPD3P42695 1498 aa27.42■■□□□ 1.98
SENP6-204ENST00000436928 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
SENP6-204ENST00000436928 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
SENP6-204ENST00000436928 SMARCA4P51532 1647 aa27.32■■□□□ 1.96
SENP6-204ENST00000436928 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
SENP6-204ENST00000436928 SMARCA2P51531 1590 aa27.23■■□□□ 1.95
SENP6-204ENST00000436928 NESP48681 1621 aa27.23■■□□□ 1.95
SENP6-204ENST00000436928 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
SENP6-204ENST00000436928 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
SENP6-204ENST00000436928 BAZ1AQ9NRL2 1556 aaPredicted RBP27.05■■□□□ 1.92
SENP6-204ENST00000436928 PEG3Q9GZU2 1588 aa27.03■■□□□ 1.92
SENP6-204ENST00000436928 KIF21AQ7Z4S6 1674 aa26.99■■□□□ 1.91
SENP6-204ENST00000436928 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
SENP6-204ENST00000436928 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
SENP6-204ENST00000436928 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
SENP6-204ENST00000436928 WIZO95785 1651 aa26.6■■□□□ 1.85
SENP6-204ENST00000436928 WDR62O43379 1518 aa26.56■■□□□ 1.84
SENP6-204ENST00000436928 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
SENP6-204ENST00000436928 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SENP6-204ENST00000436928 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
SENP6-204ENST00000436928 CEP164Q9UPV0 1460 aa26.37■■□□□ 1.81
SENP6-204ENST00000436928 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
SENP6-204ENST00000436928 CFTRP13569 1480 aa26.22■■□□□ 1.79
SENP6-204ENST00000436928 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
SENP6-204ENST00000436928 URB2Q14146 1524 aaKnown RBP26.19■■□□□ 1.78
SENP6-204ENST00000436928 TOP2AP11388 1531 aaKnown RBP26.17■■□□□ 1.78
SENP6-204ENST00000436928 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
SENP6-204ENST00000436928 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
SENP6-204ENST00000436928 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
SENP6-204ENST00000436928 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
SENP6-204ENST00000436928 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
SENP6-204ENST00000436928 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
SENP6-204ENST00000436928 EIF4G3O43432 1585 aaKnown RBP25.84■■□□□ 1.73
SENP6-204ENST00000436928 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
SENP6-204ENST00000436928 IFT140Q96RY7 1462 aa25.82■■□□□ 1.72
SENP6-204ENST00000436928 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
SENP6-204ENST00000436928 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
SENP6-204ENST00000436928 CHD1O14646 1710 aa25.77■■□□□ 1.72
SENP6-204ENST00000436928 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.71
SENP6-204ENST00000436928 TARBP1Q13395 1621 aaKnown RBP25.69■■□□□ 1.7
SENP6-204ENST00000436928 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
SENP6-204ENST00000436928 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
SENP6-204ENST00000436928 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
SENP6-204ENST00000436928 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
SENP6-204ENST00000436928 CYB5RLQ6IPT4 315 aa25.45■■□□□ 1.66
SENP6-204ENST00000436928 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
SENP6-204ENST00000436928 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
SENP6-204ENST00000436928 FBLN2P98095 1184 aa25.34■■□□□ 1.65
SENP6-204ENST00000436928 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SENP6-204ENST00000436928 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
SENP6-204ENST00000436928 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
SENP6-204ENST00000436928 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
SENP6-204ENST00000436928 SOGA1O94964 1423 aa25.29■■□□□ 1.64
SENP6-204ENST00000436928 CUX1P39880 1505 aa25.27■■□□□ 1.64
SENP6-204ENST00000436928 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
SENP6-204ENST00000436928 TRHP20396 242 aaPredicted RBP25.25■■□□□ 1.63
SENP6-204ENST00000436928 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
SENP6-204ENST00000436928 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
SENP6-204ENST00000436928 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
SENP6-204ENST00000436928 SYNJ2O15056 1496 aa25.13■■□□□ 1.61
SENP6-204ENST00000436928 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
SENP6-204ENST00000436928 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
SENP6-204ENST00000436928 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
SENP6-204ENST00000436928 ERCC6L2Q5T890 1561 aa24.99■■□□□ 1.59
SENP6-204ENST00000436928 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
SENP6-204ENST00000436928 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
SENP6-204ENST00000436928 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
SENP6-204ENST00000436928 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
SENP6-204ENST00000436928 SHROOM2Q13796 1616 aa24.85■■□□□ 1.57
SENP6-204ENST00000436928 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
SENP6-204ENST00000436928 NUP160Q12769 1436 aa24.79■■□□□ 1.56
SENP6-204ENST00000436928 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
SENP6-204ENST00000436928 TOP2BQ02880 1626 aa24.78■■□□□ 1.56
SENP6-204ENST00000436928 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
SENP6-204ENST00000436928 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
SENP6-204ENST00000436928 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
SENP6-204ENST00000436928 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
SENP6-204ENST00000436928 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
SENP6-204ENST00000436928 SUPT5HO00267 1087 aaKnown RBP24.57■■□□□ 1.52
SENP6-204ENST00000436928 PRG4Q92954 1404 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms