RNA–Protein interactions for RNA: ENST00000436790.6

SEC31A-206, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,717 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-206ENST00000436790 NISCHQ9Y2I1 1504 aa40.5■■■■■ 4.07
SEC31A-206ENST00000436790 ABCC9O60706 1549 aa36.69■■■■□ 3.46
SEC31A-206ENST00000436790 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
SEC31A-206ENST00000436790 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
SEC31A-206ENST00000436790 DNAJC5BQ9UF47 199 aa34.78■■■■□ 3.16
SEC31A-206ENST00000436790 NACADO15069 1562 aa34.57■■■■□ 3.12
SEC31A-206ENST00000436790 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
SEC31A-206ENST00000436790 PABPN1Q86U42 306 aaKnown RBP eCLIP34.07■■■■□ 3.04
SEC31A-206ENST00000436790 MYO15BQ96JP2 1530 aa34.06■■■■□ 3.04
SEC31A-206ENST00000436790 DCAF8L2P0C7V8 631 aa34.05■■■■□ 3.04
SEC31A-206ENST00000436790 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
SEC31A-206ENST00000436790 DCAF1Q9Y4B6 1507 aa33.5■■■□□ 2.95
SEC31A-206ENST00000436790 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
SEC31A-206ENST00000436790 SHROOM4Q9ULL8 1493 aa33.44■■■□□ 2.94
SEC31A-206ENST00000436790 CC2D2AQ9P2K1 1620 aa33.21■■■□□ 2.91
SEC31A-206ENST00000436790 SCRIBQ14160 1630 aa33.15■■■□□ 2.9
SEC31A-206ENST00000436790 CECR2Q9BXF3 1484 aa33.11■■■□□ 2.89
SEC31A-206ENST00000436790 EIF4G1Q04637 1599 aaKnown RBP33.07■■■□□ 2.88
SEC31A-206ENST00000436790 DNAJC5Q9H3Z4 198 aa32.16■■■□□ 2.74
SEC31A-206ENST00000436790 NCAPD3P42695 1498 aa31.93■■■□□ 2.7
SEC31A-206ENST00000436790 CUX2O14529 1486 aa31.84■■■□□ 2.69
SEC31A-206ENST00000436790 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
SEC31A-206ENST00000436790 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
SEC31A-206ENST00000436790 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
SEC31A-206ENST00000436790 ERCC6Q03468 1493 aa31.66■■■□□ 2.66
SEC31A-206ENST00000436790 SMARCA2P51531 1590 aa31.64■■■□□ 2.66
SEC31A-206ENST00000436790 NESP48681 1621 aa31.48■■■□□ 2.63
SEC31A-206ENST00000436790 BAZ1AQ9NRL2 1556 aaPredicted RBP31.43■■■□□ 2.62
SEC31A-206ENST00000436790 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
SEC31A-206ENST00000436790 BAZ1BQ9UIG0 1483 aaKnown RBP31.38■■■□□ 2.61
SEC31A-206ENST00000436790 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
SEC31A-206ENST00000436790 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
SEC31A-206ENST00000436790 MROH2BQ7Z745 1585 aa31.19■■■□□ 2.58
SEC31A-206ENST00000436790 KIF21AQ7Z4S6 1674 aa31.11■■■□□ 2.57
SEC31A-206ENST00000436790 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
SEC31A-206ENST00000436790 CADPSQ9ULU8 1353 aa30.89■■■□□ 2.54
SEC31A-206ENST00000436790 WIZO95785 1651 aa30.8■■■□□ 2.52
SEC31A-206ENST00000436790 MRC2Q9UBG0 1479 aa30.79■■■□□ 2.52
SEC31A-206ENST00000436790 WDR62O43379 1518 aa30.78■■■□□ 2.52
SEC31A-206ENST00000436790 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
SEC31A-206ENST00000436790 FANCD2Q9BXW9 1451 aa30.53■■■□□ 2.48
SEC31A-206ENST00000436790 CFTRP13569 1480 aa30.51■■■□□ 2.48
SEC31A-206ENST00000436790 TRIM41Q8WV44 630 aa30.45■■■□□ 2.47
SEC31A-206ENST00000436790 RSF1Q96T23 1441 aaPredicted RBP30.41■■■□□ 2.46
SEC31A-206ENST00000436790 TOP2AP11388 1531 aaKnown RBP30.39■■■□□ 2.45
SEC31A-206ENST00000436790 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
SEC31A-206ENST00000436790 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
SEC31A-206ENST00000436790 OSCARQ8IYS5 282 aa30.24■■■□□ 2.43
SEC31A-206ENST00000436790 CCDC88BA6NC98 1476 aa30.03■■■□□ 2.4
SEC31A-206ENST00000436790 IFT140Q96RY7 1462 aa30■■■□□ 2.39
SEC31A-206ENST00000436790 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
SEC31A-206ENST00000436790 RIMBP3CA6NJZ7 1639 aa29.97■■■□□ 2.39
SEC31A-206ENST00000436790 RIMBP3BA6NNM3 1639 aa29.97■■■□□ 2.39
SEC31A-206ENST00000436790 RIMBP3Q9UFD9 1639 aa29.97■■■□□ 2.39
SEC31A-206ENST00000436790 TOPBP1Q92547 1522 aa29.94■■■□□ 2.38
SEC31A-206ENST00000436790 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
SEC31A-206ENST00000436790 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
SEC31A-206ENST00000436790 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
SEC31A-206ENST00000436790 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
SEC31A-206ENST00000436790 TARBP1Q13395 1621 aaKnown RBP29.76■■■□□ 2.35
SEC31A-206ENST00000436790 CHD1O14646 1710 aa29.69■■■□□ 2.34
SEC31A-206ENST00000436790 AQRO60306 1485 aaKnown RBP eCLIP29.65■■■□□ 2.344e-10■■■■□ 22.9
SEC31A-206ENST00000436790 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
SEC31A-206ENST00000436790 ARAP1Q96P48 1450 aa29.52■■■□□ 2.32
SEC31A-206ENST00000436790 CYB5RLQ6IPT4 315 aa29.51■■■□□ 2.31
SEC31A-206ENST00000436790 RAD54L2Q9Y4B4 1467 aa29.48■■■□□ 2.31
SEC31A-206ENST00000436790 WDR97A6NE52 1622 aa29.44■■■□□ 2.3
SEC31A-206ENST00000436790 SOGA1O94964 1423 aa29.42■■■□□ 2.3
SEC31A-206ENST00000436790 TDRD9Q8NDG6 1382 aaKnown RBP29.39■■■□□ 2.3
SEC31A-206ENST00000436790 FBLN2P98095 1184 aa29.37■■■□□ 2.29
SEC31A-206ENST00000436790 CLASP1Q7Z460 1538 aa29.37■■■□□ 2.29
SEC31A-206ENST00000436790 FGD5Q6ZNL6 1462 aa29.36■■■□□ 2.29
SEC31A-206ENST00000436790 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
SEC31A-206ENST00000436790 CUX1P39880 1505 aa29.32■■■□□ 2.28
SEC31A-206ENST00000436790 MAGI1Q96QZ7 1491 aaPredicted RBP29.28■■■□□ 2.28
SEC31A-206ENST00000436790 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
SEC31A-206ENST00000436790 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
SEC31A-206ENST00000436790 TRHP20396 242 aaPredicted RBP29.22■■■□□ 2.27
SEC31A-206ENST00000436790 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
SEC31A-206ENST00000436790 CHMP7Q8WUX9 453 aaPredicted RBP29.17■■■□□ 2.26
SEC31A-206ENST00000436790 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
SEC31A-206ENST00000436790 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
SEC31A-206ENST00000436790 ABCA5Q8WWZ7 1642 aa29.07■■■□□ 2.24
SEC31A-206ENST00000436790 ABCA10Q8WWZ4 1543 aa29.05■■■□□ 2.24
SEC31A-206ENST00000436790 GRIN2AQ12879 1464 aa28.87■■■□□ 2.21
SEC31A-206ENST00000436790 ERCC6L2Q5T890 1561 aa28.85■■■□□ 2.21
SEC31A-206ENST00000436790 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
SEC31A-206ENST00000436790 NUP160Q12769 1436 aa28.82■■■□□ 2.2
SEC31A-206ENST00000436790 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
SEC31A-206ENST00000436790 BIVM-ERCC5R4GMW8 1640 aa28.81■■■□□ 2.2
SEC31A-206ENST00000436790 WRNQ14191 1432 aaPredicted RBP eCLIP28.79■■■□□ 2.2
SEC31A-206ENST00000436790 SHROOM2Q13796 1616 aa28.78■■■□□ 2.2
SEC31A-206ENST00000436790 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
SEC31A-206ENST00000436790 FHAD1B1AJZ9 1412 aa28.7■■■□□ 2.19
SEC31A-206ENST00000436790 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
SEC31A-206ENST00000436790 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
SEC31A-206ENST00000436790 AEBP2Q6ZN18 517 aaPredicted RBP28.58■■■□□ 2.17
SEC31A-206ENST00000436790 KIF13AQ9H1H9 1805 aa28.57■■■□□ 2.16
SEC31A-206ENST00000436790 PRG4Q92954 1404 aaPredicted RBP28.49■■■□□ 2.15
SEC31A-206ENST00000436790 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms