RNA–Protein interactions for RNA: ENST00000436585.1

LINC00328-2P-201, Transcript of long intergenic non-protein coding RNA 328-2, pseudogene, humanhuman

BASIC

Gene LINC00328-2P, Length 219 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00328-2P-201ENST00000436585 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
LINC00328-2P-201ENST00000436585 ABCC9O60706 1549 aa16.61■□□□□ 0.25
LINC00328-2P-201ENST00000436585 DNAJC5BQ9UF47 199 aa16.37■□□□□ 0.21
LINC00328-2P-201ENST00000436585 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
LINC00328-2P-201ENST00000436585 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
LINC00328-2P-201ENST00000436585 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC00328-2P-201ENST00000436585 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
LINC00328-2P-201ENST00000436585 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
LINC00328-2P-201ENST00000436585 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
LINC00328-2P-201ENST00000436585 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
LINC00328-2P-201ENST00000436585 NACADO15069 1562 aa14.9□□□□□ -0.02
LINC00328-2P-201ENST00000436585 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
LINC00328-2P-201ENST00000436585 CC2D2AQ9P2K1 1620 aa14.88□□□□□ -0.03
LINC00328-2P-201ENST00000436585 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
LINC00328-2P-201ENST00000436585 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
LINC00328-2P-201ENST00000436585 CUX2O14529 1486 aa14.48□□□□□ -0.09
LINC00328-2P-201ENST00000436585 SHROOM4Q9ULL8 1493 aa14.38□□□□□ -0.11
LINC00328-2P-201ENST00000436585 ERCC6Q03468 1493 aa14.37□□□□□ -0.11
LINC00328-2P-201ENST00000436585 SCRIBQ14160 1630 aa14.31□□□□□ -0.12
LINC00328-2P-201ENST00000436585 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
LINC00328-2P-201ENST00000436585 NESP48681 1621 aa14.02□□□□□ -0.16
LINC00328-2P-201ENST00000436585 AEBP2Q6ZN18 517 aaPredicted RBP14.01□□□□□ -0.17
LINC00328-2P-201ENST00000436585 THOC2Q8NI27 1593 aaKnown RBP13.94□□□□□ -0.18
LINC00328-2P-201ENST00000436585 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
LINC00328-2P-201ENST00000436585 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
LINC00328-2P-201ENST00000436585 DCAF1Q9Y4B6 1507 aa13.81□□□□□ -0.2
LINC00328-2P-201ENST00000436585 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
LINC00328-2P-201ENST00000436585 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
LINC00328-2P-201ENST00000436585 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
LINC00328-2P-201ENST00000436585 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
LINC00328-2P-201ENST00000436585 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
LINC00328-2P-201ENST00000436585 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
LINC00328-2P-201ENST00000436585 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
LINC00328-2P-201ENST00000436585 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
LINC00328-2P-201ENST00000436585 ATAD2BQ9ULI0 1458 aa13.67□□□□□ -0.22
LINC00328-2P-201ENST00000436585 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
LINC00328-2P-201ENST00000436585 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
LINC00328-2P-201ENST00000436585 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
LINC00328-2P-201ENST00000436585 ILDR1Q86SU0 546 aaPredicted RBP13.58□□□□□ -0.24
LINC00328-2P-201ENST00000436585 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
LINC00328-2P-201ENST00000436585 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
LINC00328-2P-201ENST00000436585 ARHGEF11O15085 1522 aa13.55□□□□□ -0.24
LINC00328-2P-201ENST00000436585 BAZ1BQ9UIG0 1483 aaKnown RBP13.52□□□□□ -0.25
LINC00328-2P-201ENST00000436585 WDR62O43379 1518 aa13.51□□□□□ -0.25
LINC00328-2P-201ENST00000436585 SMARCA4P51532 1647 aa13.45□□□□□ -0.26
LINC00328-2P-201ENST00000436585 ARAP1Q96P48 1450 aa13.39□□□□□ -0.27
LINC00328-2P-201ENST00000436585 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
LINC00328-2P-201ENST00000436585 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
LINC00328-2P-201ENST00000436585 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
LINC00328-2P-201ENST00000436585 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
LINC00328-2P-201ENST00000436585 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
LINC00328-2P-201ENST00000436585 FBLN2P98095 1184 aa13.21□□□□□ -0.29
LINC00328-2P-201ENST00000436585 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
LINC00328-2P-201ENST00000436585 CHD1O14646 1710 aa13.19□□□□□ -0.3
LINC00328-2P-201ENST00000436585 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
LINC00328-2P-201ENST00000436585 RSF1Q96T23 1441 aaPredicted RBP13.09□□□□□ -0.31
LINC00328-2P-201ENST00000436585 EIF4G3O43432 1585 aaKnown RBP13.07□□□□□ -0.32
LINC00328-2P-201ENST00000436585 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
LINC00328-2P-201ENST00000436585 KDM4FA0A1W2PPD8 638 aa13.03□□□□□ -0.32
LINC00328-2P-201ENST00000436585 AQRO60306 1485 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00328-2P-201ENST00000436585 CFTRP13569 1480 aa13□□□□□ -0.33
LINC00328-2P-201ENST00000436585 WIZO95785 1651 aa12.98□□□□□ -0.33
LINC00328-2P-201ENST00000436585 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
LINC00328-2P-201ENST00000436585 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
LINC00328-2P-201ENST00000436585 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
LINC00328-2P-201ENST00000436585 KIF13AQ9H1H9 1805 aa12.87□□□□□ -0.35
LINC00328-2P-201ENST00000436585 CHMP7Q8WUX9 453 aaPredicted RBP12.86□□□□□ -0.35
LINC00328-2P-201ENST00000436585 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
LINC00328-2P-201ENST00000436585 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
LINC00328-2P-201ENST00000436585 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
LINC00328-2P-201ENST00000436585 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
LINC00328-2P-201ENST00000436585 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
LINC00328-2P-201ENST00000436585 HECW2Q9P2P5 1572 aa12.81□□□□□ -0.36
LINC00328-2P-201ENST00000436585 LMTK3Q96Q04 1460 aa12.81□□□□□ -0.36
LINC00328-2P-201ENST00000436585 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
LINC00328-2P-201ENST00000436585 ERCC6L2Q5T890 1561 aa12.79□□□□□ -0.36
LINC00328-2P-201ENST00000436585 RAD54L2Q9Y4B4 1467 aa12.77□□□□□ -0.37
LINC00328-2P-201ENST00000436585 FAM69CQ0P6D2 419 aa12.75□□□□□ -0.37
LINC00328-2P-201ENST00000436585 DNMBPQ6XZF7 1577 aa12.75□□□□□ -0.37
LINC00328-2P-201ENST00000436585 ILDR2Q71H61 639 aa12.73□□□□□ -0.37
LINC00328-2P-201ENST00000436585 KDM6BO15054 1643 aa12.73□□□□□ -0.37
LINC00328-2P-201ENST00000436585 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
LINC00328-2P-201ENST00000436585 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
LINC00328-2P-201ENST00000436585 ADGRL1O94910 1474 aa12.71□□□□□ -0.38
LINC00328-2P-201ENST00000436585 ABCC8Q09428 1581 aa12.69□□□□□ -0.38
LINC00328-2P-201ENST00000436585 SOCS7O14512 581 aa12.69□□□□□ -0.38
LINC00328-2P-201ENST00000436585 SYNJ2O15056 1496 aa12.66□□□□□ -0.38
LINC00328-2P-201ENST00000436585 SOGA1O94964 1423 aa12.66□□□□□ -0.38
LINC00328-2P-201ENST00000436585 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
LINC00328-2P-201ENST00000436585 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
LINC00328-2P-201ENST00000436585 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
LINC00328-2P-201ENST00000436585 GRIN2BQ13224 1484 aa12.6□□□□□ -0.39
LINC00328-2P-201ENST00000436585 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
LINC00328-2P-201ENST00000436585 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
LINC00328-2P-201ENST00000436585 DIP2BQ9P265 1576 aa12.58□□□□□ -0.4
LINC00328-2P-201ENST00000436585 CCDC88BA6NC98 1476 aa12.58□□□□□ -0.4
LINC00328-2P-201ENST00000436585 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
LINC00328-2P-201ENST00000436585 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
LINC00328-2P-201ENST00000436585 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00328-2P-201ENST00000436585 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms