RNA–Protein interactions for RNA: ENST00000436359.1

AP001048.1-201, humanhuman

TSL 2 BASIC

Gene AP001048.1, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001048.1-201ENST00000436359 NISCHQ9Y2I1 1504 aa18.74■□□□□ 0.59
AP001048.1-201ENST00000436359 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
AP001048.1-201ENST00000436359 ABCC9O60706 1549 aa16.65■□□□□ 0.26
AP001048.1-201ENST00000436359 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
AP001048.1-201ENST00000436359 NACADO15069 1562 aa15.95■□□□□ 0.14
AP001048.1-201ENST00000436359 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
AP001048.1-201ENST00000436359 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.13
AP001048.1-201ENST00000436359 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
AP001048.1-201ENST00000436359 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
AP001048.1-201ENST00000436359 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
AP001048.1-201ENST00000436359 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
AP001048.1-201ENST00000436359 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.07
AP001048.1-201ENST00000436359 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
AP001048.1-201ENST00000436359 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
AP001048.1-201ENST00000436359 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
AP001048.1-201ENST00000436359 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
AP001048.1-201ENST00000436359 EIF4G1Q04637 1599 aaKnown RBP15.19■□□□□ 0.02
AP001048.1-201ENST00000436359 CECR2Q9BXF3 1484 aa15.04■□□□□ -0
AP001048.1-201ENST00000436359 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
AP001048.1-201ENST00000436359 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
AP001048.1-201ENST00000436359 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
AP001048.1-201ENST00000436359 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
AP001048.1-201ENST00000436359 SMARCA2P51531 1590 aa14.61□□□□□ -0.07
AP001048.1-201ENST00000436359 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
AP001048.1-201ENST00000436359 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
AP001048.1-201ENST00000436359 CUX2O14529 1486 aa14.51□□□□□ -0.09
AP001048.1-201ENST00000436359 BAZ1BQ9UIG0 1483 aaKnown RBP14.42□□□□□ -0.1
AP001048.1-201ENST00000436359 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
AP001048.1-201ENST00000436359 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
AP001048.1-201ENST00000436359 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
AP001048.1-201ENST00000436359 ERCC6Q03468 1493 aa14.35□□□□□ -0.11
AP001048.1-201ENST00000436359 NESP48681 1621 aa14.34□□□□□ -0.11
AP001048.1-201ENST00000436359 KIF21AQ7Z4S6 1674 aa14.33□□□□□ -0.12
AP001048.1-201ENST00000436359 DNAJC5Q9H3Z4 198 aa14.3□□□□□ -0.12
AP001048.1-201ENST00000436359 WIZO95785 1651 aa14.24□□□□□ -0.13
AP001048.1-201ENST00000436359 WDR62O43379 1518 aa14.17□□□□□ -0.14
AP001048.1-201ENST00000436359 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
AP001048.1-201ENST00000436359 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
AP001048.1-201ENST00000436359 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
AP001048.1-201ENST00000436359 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
AP001048.1-201ENST00000436359 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
AP001048.1-201ENST00000436359 CFTRP13569 1480 aa14.07□□□□□ -0.16
AP001048.1-201ENST00000436359 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
AP001048.1-201ENST00000436359 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
AP001048.1-201ENST00000436359 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
AP001048.1-201ENST00000436359 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
AP001048.1-201ENST00000436359 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
AP001048.1-201ENST00000436359 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
AP001048.1-201ENST00000436359 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
AP001048.1-201ENST00000436359 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
AP001048.1-201ENST00000436359 TARBP1Q13395 1621 aaKnown RBP13.75□□□□□ -0.21
AP001048.1-201ENST00000436359 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
AP001048.1-201ENST00000436359 ABCC8Q09428 1581 aa13.75□□□□□ -0.21
AP001048.1-201ENST00000436359 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
AP001048.1-201ENST00000436359 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
AP001048.1-201ENST00000436359 CHD1O14646 1710 aa13.67□□□□□ -0.22
AP001048.1-201ENST00000436359 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
AP001048.1-201ENST00000436359 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
AP001048.1-201ENST00000436359 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
AP001048.1-201ENST00000436359 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
AP001048.1-201ENST00000436359 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
AP001048.1-201ENST00000436359 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
AP001048.1-201ENST00000436359 CUX1P39880 1505 aa13.55□□□□□ -0.24
AP001048.1-201ENST00000436359 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.25
AP001048.1-201ENST00000436359 CLASP1Q7Z460 1538 aa13.52□□□□□ -0.25
AP001048.1-201ENST00000436359 PBRM1Q86U86 1689 aa13.52□□□□□ -0.25
AP001048.1-201ENST00000436359 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
AP001048.1-201ENST00000436359 AQRO60306 1485 aaKnown RBP eCLIP13.5□□□□□ -0.25
AP001048.1-201ENST00000436359 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
AP001048.1-201ENST00000436359 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
AP001048.1-201ENST00000436359 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
AP001048.1-201ENST00000436359 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
AP001048.1-201ENST00000436359 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
AP001048.1-201ENST00000436359 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
AP001048.1-201ENST00000436359 SOGA1O94964 1423 aa13.44□□□□□ -0.26
AP001048.1-201ENST00000436359 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
AP001048.1-201ENST00000436359 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
AP001048.1-201ENST00000436359 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
AP001048.1-201ENST00000436359 SYNJ2O15056 1496 aa13.4□□□□□ -0.26
AP001048.1-201ENST00000436359 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
AP001048.1-201ENST00000436359 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
AP001048.1-201ENST00000436359 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
AP001048.1-201ENST00000436359 GAPVD1Q14C86 1478 aa13.35□□□□□ -0.27
AP001048.1-201ENST00000436359 SHROOM2Q13796 1616 aa13.32□□□□□ -0.28
AP001048.1-201ENST00000436359 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
AP001048.1-201ENST00000436359 NUP160Q12769 1436 aa13.28□□□□□ -0.28
AP001048.1-201ENST00000436359 GRIN2AQ12879 1464 aa13.28□□□□□ -0.28
AP001048.1-201ENST00000436359 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
AP001048.1-201ENST00000436359 WRNQ14191 1432 aaPredicted RBP eCLIP13.26□□□□□ -0.29
AP001048.1-201ENST00000436359 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
AP001048.1-201ENST00000436359 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
AP001048.1-201ENST00000436359 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
AP001048.1-201ENST00000436359 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
AP001048.1-201ENST00000436359 FBLN2P98095 1184 aa13.18□□□□□ -0.3
AP001048.1-201ENST00000436359 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
AP001048.1-201ENST00000436359 KIF13AQ9H1H9 1805 aa13.13□□□□□ -0.31
AP001048.1-201ENST00000436359 CUL7Q14999 1698 aa13.13□□□□□ -0.31
AP001048.1-201ENST00000436359 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
AP001048.1-201ENST00000436359 MAPKBP1O60336 1514 aa13.03□□□□□ -0.32
AP001048.1-201ENST00000436359 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms