RNA–Protein interactions for RNA: ENST00000435827.6

NUDC-202, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 5

Gene NUDC, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-202ENST00000435827 NISCHQ9Y2I1 1504 aa55.27■■■■■ 6.44
NUDC-202ENST00000435827 CCDC180Q9P1Z9 1646 aa49.51■■■■■ 5.52
NUDC-202ENST00000435827 ABCC9O60706 1549 aa49.17■■■■■ 5.46
NUDC-202ENST00000435827 RB1CC1Q8TDY2 1594 aa47.01■■■■■ 5.12
NUDC-202ENST00000435827 NACADO15069 1562 aa46.73■■■■■ 5.07
NUDC-202ENST00000435827 DCAF8L2P0C7V8 631 aa46.38■■■■■ 5.02
NUDC-202ENST00000435827 MYO15BQ96JP2 1530 aa46.17■■■■■ 4.98
NUDC-202ENST00000435827 UNC13AQ9UPW8 1703 aa45.94■■■■■ 4.95
NUDC-202ENST00000435827 ZCCHC6Q5VYS8 1495 aaKnown RBP45.92■■■■■ 4.94
NUDC-202ENST00000435827 DNAJC5BQ9UF47 199 aa45.88■■■■■ 4.94
NUDC-202ENST00000435827 DCAF1Q9Y4B6 1507 aa45.75■■■■■ 4.91
NUDC-202ENST00000435827 PABPN1Q86U42 306 aaKnown RBP eCLIP45.74■■■■■ 4.91
NUDC-202ENST00000435827 BICRAQ9NZM4 1560 aa45.55■■■■■ 4.88
NUDC-202ENST00000435827 SHROOM4Q9ULL8 1493 aa45.1■■■■■ 4.81
NUDC-202ENST00000435827 SCRIBQ14160 1630 aa45.01■■■■■ 4.8
NUDC-202ENST00000435827 CC2D2AQ9P2K1 1620 aa44.5■■■■■ 4.71
NUDC-202ENST00000435827 EIF4G1Q04637 1599 aaKnown RBP44.44■■■■■ 4.71
NUDC-202ENST00000435827 CECR2Q9BXF3 1484 aa44.31■■■■■ 4.68
NUDC-202ENST00000435827 NCAPD3P42695 1498 aa43.09■■■■■ 4.49
NUDC-202ENST00000435827 SMARCA4P51532 1647 aa43■■■■■ 4.47
NUDC-202ENST00000435827 ATAD2BQ9ULI0 1458 aa42.95■■■■■ 4.47
NUDC-202ENST00000435827 SMARCA2P51531 1590 aa42.92■■■■■ 4.46
NUDC-202ENST00000435827 BAZ1AQ9NRL2 1556 aaPredicted RBP42.86■■■■■ 4.45
NUDC-202ENST00000435827 HMGXB3Q12766 1538 aa42.83■■■■■ 4.45
NUDC-202ENST00000435827 PEG3Q9GZU2 1588 aa42.61■■■■■ 4.41
NUDC-202ENST00000435827 BAZ1BQ9UIG0 1483 aaKnown RBP42.57■■■■■ 4.41
NUDC-202ENST00000435827 MROH2BQ7Z745 1585 aa42.56■■■■■ 4.4
NUDC-202ENST00000435827 ERCC6Q03468 1493 aa42.5■■■■■ 4.39
NUDC-202ENST00000435827 CUX2O14529 1486 aa42.42■■■■■ 4.38
NUDC-202ENST00000435827 NESP48681 1621 aa42.28■■■■■ 4.36
NUDC-202ENST00000435827 LAMC3Q9Y6N6 1575 aa42.14■■■■■ 4.34
NUDC-202ENST00000435827 DNAJC5Q9H3Z4 198 aa42.1■■■■■ 4.33
NUDC-202ENST00000435827 WIZO95785 1651 aa42.02■■■■■ 4.32
NUDC-202ENST00000435827 RSF1Q96T23 1441 aaPredicted RBP41.91■■■■■ 4.3
NUDC-202ENST00000435827 THOC2Q8NI27 1593 aaKnown RBP41.9■■■■■ 4.3
NUDC-202ENST00000435827 PDS5BQ9NTI5 1447 aa41.86■■■■■ 4.29
NUDC-202ENST00000435827 KIF21AQ7Z4S6 1674 aa41.83■■■■■ 4.29
NUDC-202ENST00000435827 CADPSQ9ULU8 1353 aa41.76■■■■■ 4.28
NUDC-202ENST00000435827 TOP2AP11388 1531 aaKnown RBP41.59■■■■■ 4.25
NUDC-202ENST00000435827 MRC2Q9UBG0 1479 aa41.47■■■■■ 4.23
NUDC-202ENST00000435827 WDR62O43379 1518 aa41.38■■■■■ 4.21
NUDC-202ENST00000435827 CFTRP13569 1480 aa41.36■■■■■ 4.21
NUDC-202ENST00000435827 CEP164Q9UPV0 1460 aa41.35■■■■■ 4.21
NUDC-202ENST00000435827 FANCD2Q9BXW9 1451 aa41.29■■■■■ 4.2
NUDC-202ENST00000435827 CCDC88BA6NC98 1476 aa41.13■■■■■ 4.17
NUDC-202ENST00000435827 PRDM2Q13029 1718 aa41.07■■■■■ 4.17
NUDC-202ENST00000435827 URB2Q14146 1524 aaKnown RBP40.92■■■■■ 4.14
NUDC-202ENST00000435827 ABCC8Q09428 1581 aa40.54■■■■■ 4.08
NUDC-202ENST00000435827 TOPBP1Q92547 1522 aa40.53■■■■■ 4.08
NUDC-202ENST00000435827 IFT140Q96RY7 1462 aa40.52■■■■■ 4.08
NUDC-202ENST00000435827 DNMBPQ6XZF7 1577 aa40.44■■■■■ 4.06
NUDC-202ENST00000435827 OSCARQ8IYS5 282 aa40.44■■■■■ 4.06
NUDC-202ENST00000435827 SUPT5HO00267 1087 aaKnown RBP40.37■■■■■ 4.05
NUDC-202ENST00000435827 ZNF608Q9ULD9 1512 aaPredicted RBP40.36■■■■■ 4.05
NUDC-202ENST00000435827 TRIM41Q8WV44 630 aa40.27■■■■■ 4.04
NUDC-202ENST00000435827 EIF4G3O43432 1585 aaKnown RBP40.23■■■■■ 4.03
NUDC-202ENST00000435827 TARBP1Q13395 1621 aaKnown RBP40.18■■■■■ 4.02
NUDC-202ENST00000435827 POLA1P09884 1462 aaPredicted RBP40.12■■■■■ 4.01
NUDC-202ENST00000435827 AQRO60306 1485 aaKnown RBP eCLIP40.02■■■■■ 41e-7■■■■□ 21.4
NUDC-202ENST00000435827 SOGA1O94964 1423 aa39.96■■■■□ 3.99
NUDC-202ENST00000435827 CUX1P39880 1505 aa39.96■■■■□ 3.99
NUDC-202ENST00000435827 RAD54L2Q9Y4B4 1467 aa39.93■■■■□ 3.98
NUDC-202ENST00000435827 RIMBP3CA6NJZ7 1639 aa39.92■■■■□ 3.98
NUDC-202ENST00000435827 RIMBP3BA6NNM3 1639 aa39.92■■■■□ 3.98
NUDC-202ENST00000435827 RIMBP3Q9UFD9 1639 aa39.92■■■■□ 3.98
NUDC-202ENST00000435827 CHD1O14646 1710 aa39.91■■■■□ 3.98
NUDC-202ENST00000435827 FGD5Q6ZNL6 1462 aa39.91■■■■□ 3.98
NUDC-202ENST00000435827 WDR97A6NE52 1622 aa39.89■■■■□ 3.98
NUDC-202ENST00000435827 ARHGEF11O15085 1522 aa39.81■■■■□ 3.96
NUDC-202ENST00000435827 TDRD9Q8NDG6 1382 aaKnown RBP39.79■■■■□ 3.96
NUDC-202ENST00000435827 FBLN2P98095 1184 aa39.72■■■■□ 3.95
NUDC-202ENST00000435827 SNAPC4Q5SXM2 1469 aa39.65■■■■□ 3.94
NUDC-202ENST00000435827 MAGI1Q96QZ7 1491 aaPredicted RBP39.62■■■■□ 3.93
NUDC-202ENST00000435827 GRIN2BQ13224 1484 aa39.61■■■■□ 3.93
NUDC-202ENST00000435827 ABCA10Q8WWZ4 1543 aa39.53■■■■□ 3.92
NUDC-202ENST00000435827 WRNQ14191 1432 aaPredicted RBP eCLIP39.52■■■■□ 3.92
NUDC-202ENST00000435827 PBRM1Q86U86 1689 aa39.51■■■■□ 3.92
NUDC-202ENST00000435827 CHMP7Q8WUX9 453 aaPredicted RBP39.49■■■■□ 3.91
NUDC-202ENST00000435827 GAPVD1Q14C86 1478 aa39.48■■■■□ 3.91
NUDC-202ENST00000435827 SYNJ1O43426 1573 aa39.47■■■■□ 3.91
NUDC-202ENST00000435827 SYNJ2O15056 1496 aa39.46■■■■□ 3.91
NUDC-202ENST00000435827 TOP2BQ02880 1626 aa39.46■■■■□ 3.91
NUDC-202ENST00000435827 CLASP1Q7Z460 1538 aa39.44■■■■□ 3.9
NUDC-202ENST00000435827 BIVM-ERCC5R4GMW8 1640 aa39.43■■■■□ 3.9
NUDC-202ENST00000435827 CYB5RLQ6IPT4 315 aa39.43■■■■□ 3.9
NUDC-202ENST00000435827 ABCA5Q8WWZ7 1642 aa39.43■■■■□ 3.9
NUDC-202ENST00000435827 ARAP1Q96P48 1450 aa39.4■■■■□ 3.9
NUDC-202ENST00000435827 ADAMTS12P58397 1594 aa39.11■■■■□ 3.85
NUDC-202ENST00000435827 GRIN2AQ12879 1464 aa39.09■■■■□ 3.85
NUDC-202ENST00000435827 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
NUDC-202ENST00000435827 FHAD1B1AJZ9 1412 aa39.02■■■■□ 3.84
NUDC-202ENST00000435827 TRHP20396 242 aaPredicted RBP38.96■■■■□ 3.83
NUDC-202ENST00000435827 NUP160Q12769 1436 aa38.95■■■■□ 3.83
NUDC-202ENST00000435827 CEP170Q5SW79 1584 aa38.93■■■■□ 3.82
NUDC-202ENST00000435827 SHROOM2Q13796 1616 aa38.8■■■■□ 3.8
NUDC-202ENST00000435827 ERCC6L2Q5T890 1561 aa38.76■■■■□ 3.8
NUDC-202ENST00000435827 KIF27Q86VH2 1401 aa38.75■■■■□ 3.79
NUDC-202ENST00000435827 IGF1RP08069 1367 aa38.7■■■■□ 3.78
NUDC-202ENST00000435827 RUSC2Q8N2Y8 1516 aa38.55■■■■□ 3.76
NUDC-202ENST00000435827 PRG4Q92954 1404 aaPredicted RBP38.54■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms