RNA–Protein interactions for RNA: ENST00000435630.5

CNOT10-205, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best)

Gene CNOT10, Length 2,290 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-205ENST00000435630 NISCHQ9Y2I1 1504 aa27.65■■■□□ 2.02
CNOT10-205ENST00000435630 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.49
CNOT10-205ENST00000435630 ABCC9O60706 1549 aa23.92■■□□□ 1.42
CNOT10-205ENST00000435630 DCAF8L2P0C7V8 631 aa23.2■■□□□ 1.3
CNOT10-205ENST00000435630 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
CNOT10-205ENST00000435630 NACADO15069 1562 aa22.98■■□□□ 1.27
CNOT10-205ENST00000435630 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
CNOT10-205ENST00000435630 MYO15BQ96JP2 1530 aa22.89■■□□□ 1.26
CNOT10-205ENST00000435630 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
CNOT10-205ENST00000435630 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
CNOT10-205ENST00000435630 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
CNOT10-205ENST00000435630 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
CNOT10-205ENST00000435630 BICRAQ9NZM4 1560 aa22.3■■□□□ 1.16
CNOT10-205ENST00000435630 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
CNOT10-205ENST00000435630 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
CNOT10-205ENST00000435630 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
CNOT10-205ENST00000435630 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.05
CNOT10-205ENST00000435630 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
CNOT10-205ENST00000435630 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
CNOT10-205ENST00000435630 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.01
CNOT10-205ENST00000435630 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
CNOT10-205ENST00000435630 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
CNOT10-205ENST00000435630 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
CNOT10-205ENST00000435630 NCAPD3P42695 1498 aa21.28■■□□□ 1
CNOT10-205ENST00000435630 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
CNOT10-205ENST00000435630 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
CNOT10-205ENST00000435630 RSF1Q96T23 1441 aaPredicted RBP21.17■□□□□ 0.98
CNOT10-205ENST00000435630 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
CNOT10-205ENST00000435630 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
CNOT10-205ENST00000435630 HMGXB3Q12766 1538 aa21.11■□□□□ 0.97
CNOT10-205ENST00000435630 WIZO95785 1651 aa21.06■□□□□ 0.96
CNOT10-205ENST00000435630 HRCP23327 699 aa20.92■□□□□ 0.94
CNOT10-205ENST00000435630 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.93
CNOT10-205ENST00000435630 NESP48681 1621 aa20.74■□□□□ 0.91
CNOT10-205ENST00000435630 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
CNOT10-205ENST00000435630 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
CNOT10-205ENST00000435630 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
CNOT10-205ENST00000435630 LAMC3Q9Y6N6 1575 aa20.62■□□□□ 0.89
CNOT10-205ENST00000435630 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
CNOT10-205ENST00000435630 CFTRP13569 1480 aa20.57■□□□□ 0.88
CNOT10-205ENST00000435630 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
CNOT10-205ENST00000435630 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
CNOT10-205ENST00000435630 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
CNOT10-205ENST00000435630 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
CNOT10-205ENST00000435630 CEP164Q9UPV0 1460 aa20.36■□□□□ 0.85
CNOT10-205ENST00000435630 PPARGC1BQ86YN6 1023 aaKnown RBP20.34■□□□□ 0.85
CNOT10-205ENST00000435630 TRIM26Q12899 539 aaPredicted RBP20.31■□□□□ 0.84
CNOT10-205ENST00000435630 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
CNOT10-205ENST00000435630 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
CNOT10-205ENST00000435630 CUX2O14529 1486 aa20.28■□□□□ 0.84
CNOT10-205ENST00000435630 WDR62O43379 1518 aa20.21■□□□□ 0.83
CNOT10-205ENST00000435630 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
CNOT10-205ENST00000435630 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
CNOT10-205ENST00000435630 TRIM41Q8WV44 630 aa20.13■□□□□ 0.81
CNOT10-205ENST00000435630 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
CNOT10-205ENST00000435630 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
CNOT10-205ENST00000435630 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
CNOT10-205ENST00000435630 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
CNOT10-205ENST00000435630 CUX1P39880 1505 aa19.99■□□□□ 0.79
CNOT10-205ENST00000435630 POLA1P09884 1462 aaPredicted RBP19.95■□□□□ 0.78
CNOT10-205ENST00000435630 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
CNOT10-205ENST00000435630 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
CNOT10-205ENST00000435630 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
CNOT10-205ENST00000435630 SOGA1O94964 1423 aa19.89■□□□□ 0.77
CNOT10-205ENST00000435630 RAD54L2Q9Y4B4 1467 aa19.89■□□□□ 0.77
CNOT10-205ENST00000435630 FAM9AQ8IZU1 332 aaPredicted RBP19.88■□□□□ 0.77
CNOT10-205ENST00000435630 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
CNOT10-205ENST00000435630 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
CNOT10-205ENST00000435630 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
CNOT10-205ENST00000435630 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
CNOT10-205ENST00000435630 TDRD9Q8NDG6 1382 aaKnown RBP19.81■□□□□ 0.76
CNOT10-205ENST00000435630 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.765e-7■■■□□ 17.2
CNOT10-205ENST00000435630 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
CNOT10-205ENST00000435630 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
CNOT10-205ENST00000435630 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
CNOT10-205ENST00000435630 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
CNOT10-205ENST00000435630 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
CNOT10-205ENST00000435630 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
CNOT10-205ENST00000435630 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
CNOT10-205ENST00000435630 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
CNOT10-205ENST00000435630 FBLN2P98095 1184 aa19.58■□□□□ 0.73
CNOT10-205ENST00000435630 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
CNOT10-205ENST00000435630 SNAPC4Q5SXM2 1469 aa19.57■□□□□ 0.72
CNOT10-205ENST00000435630 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
CNOT10-205ENST00000435630 CHMP7Q8WUX9 453 aaPredicted RBP19.53■□□□□ 0.72
CNOT10-205ENST00000435630 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
CNOT10-205ENST00000435630 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
CNOT10-205ENST00000435630 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
CNOT10-205ENST00000435630 IGF1RP08069 1367 aa19.46■□□□□ 0.71
CNOT10-205ENST00000435630 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
CNOT10-205ENST00000435630 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
CNOT10-205ENST00000435630 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
CNOT10-205ENST00000435630 CEP162Q5TB80 1403 aa19.41■□□□□ 0.7
CNOT10-205ENST00000435630 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
CNOT10-205ENST00000435630 EEA1Q15075 1411 aa19.4■□□□□ 0.7
CNOT10-205ENST00000435630 CHD1O14646 1710 aa19.38■□□□□ 0.69
CNOT10-205ENST00000435630 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
CNOT10-205ENST00000435630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.37■□□□□ 0.69
CNOT10-205ENST00000435630 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
CNOT10-205ENST00000435630 ADAMTS12P58397 1594 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms