RNA–Protein interactions for RNA: ENST00000434584.2

ITM2A-202, Transcript of integral membrane protein 2A, humanhuman

TSL 2 BASIC

Gene ITM2A, Length 1,698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-202ENST00000434584 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
ITM2A-202ENST00000434584 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
ITM2A-202ENST00000434584 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
ITM2A-202ENST00000434584 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
ITM2A-202ENST00000434584 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
ITM2A-202ENST00000434584 FOXD1Q16676 465 aa20.51■□□□□ 0.87
ITM2A-202ENST00000434584 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
ITM2A-202ENST00000434584 MSH5O43196 834 aa19.23■□□□□ 0.67
ITM2A-202ENST00000434584 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
ITM2A-202ENST00000434584 PIAS4Q8N2W9 510 aaPredicted RBP19.17■□□□□ 0.66
ITM2A-202ENST00000434584 ADRA2BP18089 450 aa19.11■□□□□ 0.65
ITM2A-202ENST00000434584 ABCC9O60706 1549 aa18.71■□□□□ 0.59
ITM2A-202ENST00000434584 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
ITM2A-202ENST00000434584 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
ITM2A-202ENST00000434584 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
ITM2A-202ENST00000434584 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
ITM2A-202ENST00000434584 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
ITM2A-202ENST00000434584 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
ITM2A-202ENST00000434584 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
ITM2A-202ENST00000434584 NACADO15069 1562 aa17.52■□□□□ 0.4
ITM2A-202ENST00000434584 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
ITM2A-202ENST00000434584 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
ITM2A-202ENST00000434584 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
ITM2A-202ENST00000434584 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
ITM2A-202ENST00000434584 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
ITM2A-202ENST00000434584 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
ITM2A-202ENST00000434584 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
ITM2A-202ENST00000434584 DCAF1Q9Y4B6 1507 aa16.97■□□□□ 0.31
ITM2A-202ENST00000434584 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
ITM2A-202ENST00000434584 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
ITM2A-202ENST00000434584 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
ITM2A-202ENST00000434584 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
ITM2A-202ENST00000434584 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
ITM2A-202ENST00000434584 CECR2Q9BXF3 1484 aa16.84■□□□□ 0.29
ITM2A-202ENST00000434584 EIF4G1Q04637 1599 aaKnown RBP16.78■□□□□ 0.28
ITM2A-202ENST00000434584 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
ITM2A-202ENST00000434584 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
ITM2A-202ENST00000434584 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
ITM2A-202ENST00000434584 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
ITM2A-202ENST00000434584 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
ITM2A-202ENST00000434584 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
ITM2A-202ENST00000434584 DNAJC5Q9H3Z4 198 aa16.21■□□□□ 0.18
ITM2A-202ENST00000434584 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
ITM2A-202ENST00000434584 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
ITM2A-202ENST00000434584 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
ITM2A-202ENST00000434584 ERCC6Q03468 1493 aa16.15■□□□□ 0.18
ITM2A-202ENST00000434584 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
ITM2A-202ENST00000434584 SMARCA2P51531 1590 aa16.08■□□□□ 0.17
ITM2A-202ENST00000434584 CUX2O14529 1486 aa16.08■□□□□ 0.16
ITM2A-202ENST00000434584 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
ITM2A-202ENST00000434584 NESP48681 1621 aa16.05■□□□□ 0.16
ITM2A-202ENST00000434584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
ITM2A-202ENST00000434584 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
ITM2A-202ENST00000434584 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
ITM2A-202ENST00000434584 KCNA4P22459 653 aa16■□□□□ 0.15
ITM2A-202ENST00000434584 MROH2BQ7Z745 1585 aa15.93■□□□□ 0.14
ITM2A-202ENST00000434584 PEG3Q9GZU2 1588 aa15.9■□□□□ 0.14
ITM2A-202ENST00000434584 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
ITM2A-202ENST00000434584 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
ITM2A-202ENST00000434584 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
ITM2A-202ENST00000434584 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
ITM2A-202ENST00000434584 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
ITM2A-202ENST00000434584 WIZO95785 1651 aa15.73■□□□□ 0.11
ITM2A-202ENST00000434584 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
ITM2A-202ENST00000434584 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
ITM2A-202ENST00000434584 WDR62O43379 1518 aa15.6■□□□□ 0.09
ITM2A-202ENST00000434584 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
ITM2A-202ENST00000434584 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
ITM2A-202ENST00000434584 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
ITM2A-202ENST00000434584 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
ITM2A-202ENST00000434584 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
ITM2A-202ENST00000434584 CFTRP13569 1480 aa15.51■□□□□ 0.07
ITM2A-202ENST00000434584 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
ITM2A-202ENST00000434584 URB2Q14146 1524 aaKnown RBP15.45■□□□□ 0.06
ITM2A-202ENST00000434584 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
ITM2A-202ENST00000434584 CAPN15O75808 1086 aa15.41■□□□□ 0.06
ITM2A-202ENST00000434584 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
ITM2A-202ENST00000434584 DSG3P32926 999 aa15.35■□□□□ 0.05
ITM2A-202ENST00000434584 CCDC88BA6NC98 1476 aa15.35■□□□□ 0.05
ITM2A-202ENST00000434584 APLP2Q06481 763 aa15.32■□□□□ 0.04
ITM2A-202ENST00000434584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
ITM2A-202ENST00000434584 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
ITM2A-202ENST00000434584 ZNF608Q9ULD9 1512 aaPredicted RBP15.29■□□□□ 0.04
ITM2A-202ENST00000434584 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
ITM2A-202ENST00000434584 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
ITM2A-202ENST00000434584 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
ITM2A-202ENST00000434584 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
ITM2A-202ENST00000434584 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
ITM2A-202ENST00000434584 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
ITM2A-202ENST00000434584 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
ITM2A-202ENST00000434584 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
ITM2A-202ENST00000434584 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
ITM2A-202ENST00000434584 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
ITM2A-202ENST00000434584 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
ITM2A-202ENST00000434584 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
ITM2A-202ENST00000434584 AQRO60306 1485 aaKnown RBP eCLIP15.15■□□□□ 0.02
ITM2A-202ENST00000434584 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
ITM2A-202ENST00000434584 FBLN2P98095 1184 aa15.12■□□□□ 0.01
ITM2A-202ENST00000434584 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
ITM2A-202ENST00000434584 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms