RNA–Protein interactions for RNA: ENST00000434318.1

MMP11-203, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 1,165 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-203ENST00000434318 NISCHQ9Y2I1 1504 aa34.88■■■■□ 3.17
MMP11-203ENST00000434318 ABCC9O60706 1549 aa31.95■■■□□ 2.7
MMP11-203ENST00000434318 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
MMP11-203ENST00000434318 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
MMP11-203ENST00000434318 DNAJC5BQ9UF47 199 aa30.31■■■□□ 2.44
MMP11-203ENST00000434318 NACADO15069 1562 aa30.05■■■□□ 2.4
MMP11-203ENST00000434318 PABPN1Q86U42 306 aaKnown RBP eCLIP29.57■■■□□ 2.32
MMP11-203ENST00000434318 UNC13AQ9UPW8 1703 aa29.56■■■□□ 2.32
MMP11-203ENST00000434318 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
MMP11-203ENST00000434318 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
MMP11-203ENST00000434318 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
MMP11-203ENST00000434318 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
MMP11-203ENST00000434318 CECR2Q9BXF3 1484 aa28.92■■■□□ 2.22
MMP11-203ENST00000434318 DCAF1Q9Y4B6 1507 aa28.92■■■□□ 2.22
MMP11-203ENST00000434318 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
MMP11-203ENST00000434318 ZCCHC6Q5VYS8 1495 aaKnown RBP28.82■■■□□ 2.2
MMP11-203ENST00000434318 EIF4G1Q04637 1599 aaKnown RBP28.75■■■□□ 2.19
MMP11-203ENST00000434318 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
MMP11-203ENST00000434318 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
MMP11-203ENST00000434318 CUX2O14529 1486 aa27.96■■■□□ 2.07
MMP11-203ENST00000434318 ERCC6Q03468 1493 aa27.73■■■□□ 2.03
MMP11-203ENST00000434318 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
MMP11-203ENST00000434318 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
MMP11-203ENST00000434318 ATAD2BQ9ULI0 1458 aa27.48■■□□□ 1.99
MMP11-203ENST00000434318 SMARCA2P51531 1590 aa27.48■■□□□ 1.99
MMP11-203ENST00000434318 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
MMP11-203ENST00000434318 NESP48681 1621 aa27.25■■□□□ 1.95
MMP11-203ENST00000434318 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
MMP11-203ENST00000434318 BAZ1BQ9UIG0 1483 aaKnown RBP27.21■■□□□ 1.95
MMP11-203ENST00000434318 LAMC3Q9Y6N6 1575 aa27.21■■□□□ 1.95
MMP11-203ENST00000434318 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
MMP11-203ENST00000434318 PEG3Q9GZU2 1588 aa27.16■■□□□ 1.94
MMP11-203ENST00000434318 PDS5BQ9NTI5 1447 aa27.05■■□□□ 1.92
MMP11-203ENST00000434318 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
MMP11-203ENST00000434318 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
MMP11-203ENST00000434318 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
MMP11-203ENST00000434318 CADPSQ9ULU8 1353 aa26.8■■□□□ 1.88
MMP11-203ENST00000434318 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
MMP11-203ENST00000434318 WDR62O43379 1518 aa26.77■■□□□ 1.88
MMP11-203ENST00000434318 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
MMP11-203ENST00000434318 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
MMP11-203ENST00000434318 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
MMP11-203ENST00000434318 WIZO95785 1651 aa26.44■■□□□ 1.82
MMP11-203ENST00000434318 CFTRP13569 1480 aa26.39■■□□□ 1.82
MMP11-203ENST00000434318 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
MMP11-203ENST00000434318 RIMBP3CA6NJZ7 1639 aa26.18■■□□□ 1.78
MMP11-203ENST00000434318 RIMBP3BA6NNM3 1639 aa26.18■■□□□ 1.78
MMP11-203ENST00000434318 RIMBP3Q9UFD9 1639 aa26.18■■□□□ 1.78
MMP11-203ENST00000434318 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
MMP11-203ENST00000434318 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
MMP11-203ENST00000434318 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
MMP11-203ENST00000434318 ARHGEF11O15085 1522 aa26.07■■□□□ 1.76
MMP11-203ENST00000434318 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
MMP11-203ENST00000434318 ABCC8Q09428 1581 aa25.97■■□□□ 1.75
MMP11-203ENST00000434318 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
MMP11-203ENST00000434318 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
MMP11-203ENST00000434318 EIF4G3O43432 1585 aaKnown RBP25.9■■□□□ 1.74
MMP11-203ENST00000434318 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
MMP11-203ENST00000434318 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
MMP11-203ENST00000434318 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
MMP11-203ENST00000434318 CHD1O14646 1710 aa25.77■■□□□ 1.72
MMP11-203ENST00000434318 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
MMP11-203ENST00000434318 TRHP20396 242 aaPredicted RBP25.72■■□□□ 1.71
MMP11-203ENST00000434318 TARBP1Q13395 1621 aaKnown RBP25.72■■□□□ 1.71
MMP11-203ENST00000434318 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.76e-9■■□□□ 14
MMP11-203ENST00000434318 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
MMP11-203ENST00000434318 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
MMP11-203ENST00000434318 FBLN2P98095 1184 aa25.59■■□□□ 1.69
MMP11-203ENST00000434318 CLASP1Q7Z460 1538 aa25.51■■□□□ 1.67
MMP11-203ENST00000434318 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
MMP11-203ENST00000434318 SOGA1O94964 1423 aa25.47■■□□□ 1.67
MMP11-203ENST00000434318 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
MMP11-203ENST00000434318 SNAPC4Q5SXM2 1469 aa25.45■■□□□ 1.66
MMP11-203ENST00000434318 AEBP2Q6ZN18 517 aaPredicted RBP25.44■■□□□ 1.66
MMP11-203ENST00000434318 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
MMP11-203ENST00000434318 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
MMP11-203ENST00000434318 CHMP7Q8WUX9 453 aaPredicted RBP25.4■■□□□ 1.66
MMP11-203ENST00000434318 GRIN2BQ13224 1484 aa25.37■■□□□ 1.65
MMP11-203ENST00000434318 SYNJ2O15056 1496 aa25.35■■□□□ 1.65
MMP11-203ENST00000434318 FGD5Q6ZNL6 1462 aa25.35■■□□□ 1.65
MMP11-203ENST00000434318 GAPVD1Q14C86 1478 aa25.26■■□□□ 1.63
MMP11-203ENST00000434318 PBRM1Q86U86 1689 aa25.22■■□□□ 1.63
MMP11-203ENST00000434318 CUX1P39880 1505 aa25.22■■□□□ 1.63
MMP11-203ENST00000434318 ABCA5Q8WWZ7 1642 aa25.1■■□□□ 1.61
MMP11-203ENST00000434318 ABCA10Q8WWZ4 1543 aa25.1■■□□□ 1.61
MMP11-203ENST00000434318 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
MMP11-203ENST00000434318 NUP160Q12769 1436 aa24.97■■□□□ 1.59
MMP11-203ENST00000434318 CEP170Q5SW79 1584 aa24.96■■□□□ 1.59
MMP11-203ENST00000434318 ADAMTS12P58397 1594 aa24.95■■□□□ 1.58
MMP11-203ENST00000434318 SHROOM2Q13796 1616 aa24.94■■□□□ 1.58
MMP11-203ENST00000434318 ERCC6L2Q5T890 1561 aa24.92■■□□□ 1.58
MMP11-203ENST00000434318 WRNQ14191 1432 aaPredicted RBP eCLIP24.89■■□□□ 1.58
MMP11-203ENST00000434318 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
MMP11-203ENST00000434318 KIF13AQ9H1H9 1805 aa24.85■■□□□ 1.57
MMP11-203ENST00000434318 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
MMP11-203ENST00000434318 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
MMP11-203ENST00000434318 BIVM-ERCC5R4GMW8 1640 aa24.77■■□□□ 1.56
MMP11-203ENST00000434318 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
MMP11-203ENST00000434318 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
MMP11-203ENST00000434318 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms