RNA–Protein interactions for RNA: ENST00000433898.5

NDUFB3-202, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFB3, Length 503 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-202ENST00000433898 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
NDUFB3-202ENST00000433898 CHIC1Q5VXU3 224 aa20.89■□□□□ 0.93
NDUFB3-202ENST00000433898 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
NDUFB3-202ENST00000433898 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
NDUFB3-202ENST00000433898 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
NDUFB3-202ENST00000433898 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
NDUFB3-202ENST00000433898 ABCC9O60706 1549 aa16.83■□□□□ 0.28
NDUFB3-202ENST00000433898 FOXD1Q16676 465 aa16.7■□□□□ 0.26
NDUFB3-202ENST00000433898 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
NDUFB3-202ENST00000433898 PPP6R1Q9UPN7 881 aa16.23■□□□□ 0.19
NDUFB3-202ENST00000433898 ADRA2BP18089 450 aa16.2■□□□□ 0.18
NDUFB3-202ENST00000433898 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
NDUFB3-202ENST00000433898 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
NDUFB3-202ENST00000433898 PIAS4Q8N2W9 510 aaPredicted RBP15.74■□□□□ 0.11
NDUFB3-202ENST00000433898 UNC13AQ9UPW8 1703 aa15.72■□□□□ 0.11
NDUFB3-202ENST00000433898 NACADO15069 1562 aa15.68■□□□□ 0.1
NDUFB3-202ENST00000433898 PABPN1Q86U42 306 aaKnown RBP eCLIP15.6■□□□□ 0.09
NDUFB3-202ENST00000433898 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
NDUFB3-202ENST00000433898 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
NDUFB3-202ENST00000433898 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
NDUFB3-202ENST00000433898 MSH5O43196 834 aa15.25■□□□□ 0.03
NDUFB3-202ENST00000433898 CC2D2AQ9P2K1 1620 aa15.22■□□□□ 0.03
NDUFB3-202ENST00000433898 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
NDUFB3-202ENST00000433898 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
NDUFB3-202ENST00000433898 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
NDUFB3-202ENST00000433898 SHROOM4Q9ULL8 1493 aa15.1■□□□□ 0.01
NDUFB3-202ENST00000433898 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
NDUFB3-202ENST00000433898 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
NDUFB3-202ENST00000433898 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
NDUFB3-202ENST00000433898 KCNA4P22459 653 aa14.89□□□□□ -0.03
NDUFB3-202ENST00000433898 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
NDUFB3-202ENST00000433898 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
NDUFB3-202ENST00000433898 MAPK8IP2Q13387 824 aaPredicted RBP14.67□□□□□ -0.06
NDUFB3-202ENST00000433898 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
NDUFB3-202ENST00000433898 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
NDUFB3-202ENST00000433898 CUX2O14529 1486 aa14.55□□□□□ -0.08
NDUFB3-202ENST00000433898 ERCC6Q03468 1493 aa14.52□□□□□ -0.08
NDUFB3-202ENST00000433898 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
NDUFB3-202ENST00000433898 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
NDUFB3-202ENST00000433898 NESP48681 1621 aa14.4□□□□□ -0.1
NDUFB3-202ENST00000433898 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
NDUFB3-202ENST00000433898 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
NDUFB3-202ENST00000433898 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
NDUFB3-202ENST00000433898 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
NDUFB3-202ENST00000433898 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
NDUFB3-202ENST00000433898 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
NDUFB3-202ENST00000433898 KIF21AQ7Z4S6 1674 aa14.3□□□□□ -0.12
NDUFB3-202ENST00000433898 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
NDUFB3-202ENST00000433898 LAMC3Q9Y6N6 1575 aa14.22□□□□□ -0.13
NDUFB3-202ENST00000433898 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
NDUFB3-202ENST00000433898 BAZ1AQ9NRL2 1556 aaPredicted RBP14.22□□□□□ -0.13
NDUFB3-202ENST00000433898 PEG3Q9GZU2 1588 aa14.19□□□□□ -0.14
NDUFB3-202ENST00000433898 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
NDUFB3-202ENST00000433898 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
NDUFB3-202ENST00000433898 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
NDUFB3-202ENST00000433898 MROH2BQ7Z745 1585 aa14.13□□□□□ -0.15
NDUFB3-202ENST00000433898 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
NDUFB3-202ENST00000433898 WDR62O43379 1518 aa14.02□□□□□ -0.16
NDUFB3-202ENST00000433898 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
NDUFB3-202ENST00000433898 WIZO95785 1651 aa14.01□□□□□ -0.17
NDUFB3-202ENST00000433898 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
NDUFB3-202ENST00000433898 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
NDUFB3-202ENST00000433898 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
NDUFB3-202ENST00000433898 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
NDUFB3-202ENST00000433898 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
NDUFB3-202ENST00000433898 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
NDUFB3-202ENST00000433898 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
NDUFB3-202ENST00000433898 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
NDUFB3-202ENST00000433898 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
NDUFB3-202ENST00000433898 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
NDUFB3-202ENST00000433898 CFTRP13569 1480 aa13.8□□□□□ -0.2
NDUFB3-202ENST00000433898 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
NDUFB3-202ENST00000433898 ZBTB22O15209 634 aa13.74□□□□□ -0.21
NDUFB3-202ENST00000433898 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
NDUFB3-202ENST00000433898 DCAF8L1A6NGE4 600 aa13.7□□□□□ -0.22
NDUFB3-202ENST00000433898 ZNF608Q9ULD9 1512 aaPredicted RBP13.69□□□□□ -0.22
NDUFB3-202ENST00000433898 RSF1Q96T23 1441 aaPredicted RBP13.68□□□□□ -0.22
NDUFB3-202ENST00000433898 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
NDUFB3-202ENST00000433898 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
NDUFB3-202ENST00000433898 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
NDUFB3-202ENST00000433898 CHD1O14646 1710 aa13.67□□□□□ -0.22
NDUFB3-202ENST00000433898 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
NDUFB3-202ENST00000433898 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
NDUFB3-202ENST00000433898 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
NDUFB3-202ENST00000433898 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
NDUFB3-202ENST00000433898 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
NDUFB3-202ENST00000433898 CYB5RLQ6IPT4 315 aa13.56□□□□□ -0.24
NDUFB3-202ENST00000433898 TARBP1Q13395 1621 aaKnown RBP13.54□□□□□ -0.24
NDUFB3-202ENST00000433898 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
NDUFB3-202ENST00000433898 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
NDUFB3-202ENST00000433898 ARAP1Q96P48 1450 aa13.51□□□□□ -0.25
NDUFB3-202ENST00000433898 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
NDUFB3-202ENST00000433898 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
NDUFB3-202ENST00000433898 FBLN2P98095 1184 aa13.46□□□□□ -0.25
NDUFB3-202ENST00000433898 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
NDUFB3-202ENST00000433898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.261e-6■■■■□ 21.3
NDUFB3-202ENST00000433898 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
NDUFB3-202ENST00000433898 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
NDUFB3-202ENST00000433898 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
NDUFB3-202ENST00000433898 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms