RNA–Protein interactions for RNA: ENST00000431095.5

H19-208, H19, imprinted maternally expressed transcript, humanhuman

TSL 5

Gene H19, Length 1,481 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-208ENST00000431095 NISCHQ9Y2I1 1504 aa54.25■■■■■ 6.27
H19-208ENST00000431095 CCDC180Q9P1Z9 1646 aa48.09■■■■■ 5.29
H19-208ENST00000431095 ABCC9O60706 1549 aa46.85■■■■■ 5.09
H19-208ENST00000431095 DCAF8L2P0C7V8 631 aa45.23■■■■■ 4.83
H19-208ENST00000431095 ZCCHC6Q5VYS8 1495 aaKnown RBP45.22■■■■■ 4.83
H19-208ENST00000431095 NACADO15069 1562 aa45.22■■■■■ 4.83
H19-208ENST00000431095 RB1CC1Q8TDY2 1594 aa45.19■■■■■ 4.82
H19-208ENST00000431095 MYO15BQ96JP2 1530 aa45.07■■■■■ 4.81
H19-208ENST00000431095 DCAF1Q9Y4B6 1507 aa44.93■■■■■ 4.78
H19-208ENST00000431095 UNC13AQ9UPW8 1703 aa44.1■■■■■ 4.65
H19-208ENST00000431095 PABPN1Q86U42 306 aaKnown RBP eCLIP43.86■■■■■ 4.61
H19-208ENST00000431095 SCRIBQ14160 1630 aa43.85■■■■■ 4.61
H19-208ENST00000431095 BICRAQ9NZM4 1560 aa43.81■■■■■ 4.6
H19-208ENST00000431095 SHROOM4Q9ULL8 1493 aa43.43■■■■■ 4.54
H19-208ENST00000431095 DNAJC5BQ9UF47 199 aa42.89■■■■■ 4.46
H19-208ENST00000431095 EIF4G1Q04637 1599 aaKnown RBP42.64■■■■■ 4.42
H19-208ENST00000431095 CC2D2AQ9P2K1 1620 aa42.4■■■■■ 4.38
H19-208ENST00000431095 CECR2Q9BXF3 1484 aa42.22■■■■■ 4.35
H19-208ENST00000431095 BAZ1AQ9NRL2 1556 aaPredicted RBP42.03■■■■■ 4.32
H19-208ENST00000431095 SMARCA4P51532 1647 aa42.01■■■■■ 4.32
H19-208ENST00000431095 MROH2BQ7Z745 1585 aa41.79■■■■■ 4.28
H19-208ENST00000431095 ATAD2BQ9ULI0 1458 aa41.78■■■■■ 4.28
H19-208ENST00000431095 NCAPD3P42695 1498 aa41.76■■■■■ 4.28
H19-208ENST00000431095 SMARCA2P51531 1590 aa41.73■■■■■ 4.27
H19-208ENST00000431095 PEG3Q9GZU2 1588 aa41.65■■■■■ 4.26
H19-208ENST00000431095 HMGXB3Q12766 1538 aa41.53■■■■■ 4.24
H19-208ENST00000431095 RSF1Q96T23 1441 aaPredicted RBP41.42■■■■■ 4.22
H19-208ENST00000431095 BAZ1BQ9UIG0 1483 aaKnown RBP41.42■■■■■ 4.22
H19-208ENST00000431095 WIZO95785 1651 aa41.31■■■■■ 4.2
H19-208ENST00000431095 TOP2AP11388 1531 aaKnown RBP40.92■■■■■ 4.14
H19-208ENST00000431095 NESP48681 1621 aa40.61■■■■■ 4.09
H19-208ENST00000431095 LAMC3Q9Y6N6 1575 aa40.58■■■■■ 4.09
H19-208ENST00000431095 CADPSQ9ULU8 1353 aa40.55■■■■■ 4.08
H19-208ENST00000431095 SUPT5HO00267 1087 aaKnown RBP40.49■■■■■ 4.07
H19-208ENST00000431095 CCDC88BA6NC98 1476 aa40.46■■■■■ 4.07
H19-208ENST00000431095 ERCC6Q03468 1493 aa40.39■■■■■ 4.06
H19-208ENST00000431095 CFTRP13569 1480 aa40.34■■■■■ 4.05
H19-208ENST00000431095 PDS5BQ9NTI5 1447 aa40.33■■■■■ 4.05
H19-208ENST00000431095 KIF21AQ7Z4S6 1674 aa40.09■■■■■ 4.01
H19-208ENST00000431095 FANCD2Q9BXW9 1451 aa40.03■■■■■ 4
H19-208ENST00000431095 CEP164Q9UPV0 1460 aa39.96■■■■□ 3.99
H19-208ENST00000431095 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
H19-208ENST00000431095 THOC2Q8NI27 1593 aaKnown RBP39.94■■■■□ 3.98
H19-208ENST00000431095 CUX2O14529 1486 aa39.92■■■■□ 3.98
H19-208ENST00000431095 MRC2Q9UBG0 1479 aa39.86■■■■□ 3.97
H19-208ENST00000431095 WDR62O43379 1518 aa39.73■■■■□ 3.95
H19-208ENST00000431095 URB2Q14146 1524 aaKnown RBP39.61■■■■□ 3.93
H19-208ENST00000431095 ABCC8Q09428 1581 aa39.47■■■■□ 3.91
H19-208ENST00000431095 TOPBP1Q92547 1522 aa39.42■■■■□ 3.9
H19-208ENST00000431095 DNMBPQ6XZF7 1577 aa39.38■■■■□ 3.89
H19-208ENST00000431095 CUX1P39880 1505 aa39.18■■■■□ 3.86
H19-208ENST00000431095 IFT140Q96RY7 1462 aa39.14■■■■□ 3.86
H19-208ENST00000431095 POLA1P09884 1462 aaPredicted RBP39.1■■■■□ 3.85
H19-208ENST00000431095 WRNQ14191 1432 aaPredicted RBP eCLIP39.04■■■■□ 3.84
H19-208ENST00000431095 FGD5Q6ZNL6 1462 aa39.02■■■■□ 3.84
H19-208ENST00000431095 SOGA1O94964 1423 aa38.97■■■■□ 3.83
H19-208ENST00000431095 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
H19-208ENST00000431095 RAD54L2Q9Y4B4 1467 aa38.91■■■■□ 3.82
H19-208ENST00000431095 ZNF608Q9ULD9 1512 aaPredicted RBP38.91■■■■□ 3.82
H19-208ENST00000431095 TOP2BQ02880 1626 aa38.91■■■■□ 3.82
H19-208ENST00000431095 BIVM-ERCC5R4GMW8 1640 aa38.88■■■■□ 3.81
H19-208ENST00000431095 SYNJ1O43426 1573 aa38.87■■■■□ 3.81
H19-208ENST00000431095 AQRO60306 1485 aaKnown RBP eCLIP38.74■■■■□ 3.79
H19-208ENST00000431095 EIF4G3O43432 1585 aaKnown RBP38.73■■■■□ 3.79
H19-208ENST00000431095 TDRD9Q8NDG6 1382 aaKnown RBP38.71■■■■□ 3.79
H19-208ENST00000431095 ABCA10Q8WWZ4 1543 aa38.69■■■■□ 3.78
H19-208ENST00000431095 WDR97A6NE52 1622 aa38.69■■■■□ 3.78
H19-208ENST00000431095 DNAJC5Q9H3Z4 198 aa38.51■■■■□ 3.76
H19-208ENST00000431095 GAPVD1Q14C86 1478 aa38.5■■■■□ 3.75
H19-208ENST00000431095 GRIN2BQ13224 1484 aa38.48■■■■□ 3.75
H19-208ENST00000431095 ABCA5Q8WWZ7 1642 aa38.47■■■■□ 3.75
H19-208ENST00000431095 OSCARQ8IYS5 282 aa38.36■■■■□ 3.73
H19-208ENST00000431095 SNAPC4Q5SXM2 1469 aa38.36■■■■□ 3.73
H19-208ENST00000431095 MAGI1Q96QZ7 1491 aaPredicted RBP38.36■■■■□ 3.73
H19-208ENST00000431095 PBRM1Q86U86 1689 aa38.32■■■■□ 3.73
H19-208ENST00000431095 TRIM41Q8WV44 630 aa38.27■■■■□ 3.72
H19-208ENST00000431095 FBLN2P98095 1184 aa38.23■■■■□ 3.71
H19-208ENST00000431095 ERICH3Q5RHP9 1530 aa38.22■■■■□ 3.71
H19-208ENST00000431095 KIF27Q86VH2 1401 aa38.22■■■■□ 3.71
H19-208ENST00000431095 SYNJ2O15056 1496 aa38.2■■■■□ 3.71
H19-208ENST00000431095 CHMP7Q8WUX9 453 aaPredicted RBP38.2■■■■□ 3.71
H19-208ENST00000431095 CHD1O14646 1710 aa38.17■■■■□ 3.7
H19-208ENST00000431095 FHAD1B1AJZ9 1412 aa38.08■■■■□ 3.69
H19-208ENST00000431095 ADAMTS12P58397 1594 aa38.07■■■■□ 3.69
H19-208ENST00000431095 IGF1RP08069 1367 aa38.07■■■■□ 3.68
H19-208ENST00000431095 GRIN2AQ12879 1464 aa37.97■■■■□ 3.67
H19-208ENST00000431095 CHIC1Q5VXU3 224 aa37.94■■■■□ 3.66
H19-208ENST00000431095 RUSC2Q8N2Y8 1516 aa37.89■■■■□ 3.66
H19-208ENST00000431095 CUL7Q14999 1698 aa37.87■■■■□ 3.65
H19-208ENST00000431095 CLASP1Q7Z460 1538 aa37.83■■■■□ 3.65
H19-208ENST00000431095 CARMIL1Q5VZK9 1371 aa37.82■■■■□ 3.65
H19-208ENST00000431095 NUP160Q12769 1436 aa37.82■■■■□ 3.64
H19-208ENST00000431095 CEP170Q5SW79 1584 aa37.74■■■■□ 3.63
H19-208ENST00000431095 ARHGEF11O15085 1522 aa37.65■■■■□ 3.62
H19-208ENST00000431095 EEA1Q15075 1411 aa37.63■■■■□ 3.62
H19-208ENST00000431095 RIMBP3CA6NJZ7 1639 aa37.61■■■■□ 3.61
H19-208ENST00000431095 RIMBP3BA6NNM3 1639 aa37.61■■■■□ 3.61
H19-208ENST00000431095 RIMBP3Q9UFD9 1639 aa37.61■■■■□ 3.61
H19-208ENST00000431095 RAPGEF2Q9Y4G8 1499 aa37.61■■■■□ 3.61
H19-208ENST00000431095 CSRNP3Q8WYN3 585 aa37.58■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms