RNA–Protein interactions for RNA: ENST00000430989.1

SUCLG1-202, Transcript of succinate-CoA ligase alpha subunit, humanhuman

TSL 4

Gene SUCLG1, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-202ENST00000430989 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
SUCLG1-202ENST00000430989 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
SUCLG1-202ENST00000430989 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
SUCLG1-202ENST00000430989 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
SUCLG1-202ENST00000430989 ZCCHC6Q5VYS8 1495 aaKnown RBP24.35■■□□□ 1.49
SUCLG1-202ENST00000430989 ABCC9O60706 1549 aa24.23■■□□□ 1.47
SUCLG1-202ENST00000430989 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.45
SUCLG1-202ENST00000430989 MYO15BQ96JP2 1530 aa23.99■■□□□ 1.43
SUCLG1-202ENST00000430989 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
SUCLG1-202ENST00000430989 NACADO15069 1562 aa23.86■■□□□ 1.41
SUCLG1-202ENST00000430989 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
SUCLG1-202ENST00000430989 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
SUCLG1-202ENST00000430989 SCRIBQ14160 1630 aa23.28■■□□□ 1.32
SUCLG1-202ENST00000430989 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
SUCLG1-202ENST00000430989 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
SUCLG1-202ENST00000430989 PABPN1Q86U42 306 aaKnown RBP eCLIP22.77■■□□□ 1.24
SUCLG1-202ENST00000430989 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
SUCLG1-202ENST00000430989 CECR2Q9BXF3 1484 aa22.52■■□□□ 1.2
SUCLG1-202ENST00000430989 BAZ1AQ9NRL2 1556 aaPredicted RBP22.49■■□□□ 1.19
SUCLG1-202ENST00000430989 RSF1Q96T23 1441 aaPredicted RBP22.4■■□□□ 1.18
SUCLG1-202ENST00000430989 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
SUCLG1-202ENST00000430989 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
SUCLG1-202ENST00000430989 SUPT5HO00267 1087 aaKnown RBP22.34■■□□□ 1.17
SUCLG1-202ENST00000430989 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
SUCLG1-202ENST00000430989 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
SUCLG1-202ENST00000430989 WIZO95785 1651 aa22.17■■□□□ 1.14
SUCLG1-202ENST00000430989 SMARCA2P51531 1590 aa22.12■■□□□ 1.13
SUCLG1-202ENST00000430989 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
SUCLG1-202ENST00000430989 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
SUCLG1-202ENST00000430989 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
SUCLG1-202ENST00000430989 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
SUCLG1-202ENST00000430989 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
SUCLG1-202ENST00000430989 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
SUCLG1-202ENST00000430989 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
SUCLG1-202ENST00000430989 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
SUCLG1-202ENST00000430989 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
SUCLG1-202ENST00000430989 CFTRP13569 1480 aa21.41■■□□□ 1.02
SUCLG1-202ENST00000430989 CADPSQ9ULU8 1353 aa21.39■■□□□ 1.02
SUCLG1-202ENST00000430989 PRDM2Q13029 1718 aa21.32■■□□□ 1
SUCLG1-202ENST00000430989 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
SUCLG1-202ENST00000430989 NESP48681 1621 aa21.18■□□□□ 0.98
SUCLG1-202ENST00000430989 PDS5BQ9NTI5 1447 aa21.14■□□□□ 0.98
SUCLG1-202ENST00000430989 TRIM41Q8WV44 630 aa21.12■□□□□ 0.97
SUCLG1-202ENST00000430989 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
SUCLG1-202ENST00000430989 FANCD2Q9BXW9 1451 aa21.11■□□□□ 0.97
SUCLG1-202ENST00000430989 WRNQ14191 1432 aaPredicted RBP eCLIP21.11■□□□□ 0.97
SUCLG1-202ENST00000430989 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
SUCLG1-202ENST00000430989 TOP2BQ02880 1626 aa21■□□□□ 0.95
SUCLG1-202ENST00000430989 BIVM-ERCC5R4GMW8 1640 aa20.98■□□□□ 0.95
SUCLG1-202ENST00000430989 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
SUCLG1-202ENST00000430989 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
SUCLG1-202ENST00000430989 CUX1P39880 1505 aa20.95■□□□□ 0.94
SUCLG1-202ENST00000430989 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
SUCLG1-202ENST00000430989 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
SUCLG1-202ENST00000430989 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
SUCLG1-202ENST00000430989 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
SUCLG1-202ENST00000430989 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
SUCLG1-202ENST00000430989 URB2Q14146 1524 aaKnown RBP20.84■□□□□ 0.93
SUCLG1-202ENST00000430989 FGD5Q6ZNL6 1462 aa20.77■□□□□ 0.92
SUCLG1-202ENST00000430989 WDR62O43379 1518 aa20.75■□□□□ 0.91
SUCLG1-202ENST00000430989 EEA1Q15075 1411 aa20.75■□□□□ 0.91
SUCLG1-202ENST00000430989 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
SUCLG1-202ENST00000430989 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
SUCLG1-202ENST00000430989 SOGA1O94964 1423 aa20.69■□□□□ 0.9
SUCLG1-202ENST00000430989 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
SUCLG1-202ENST00000430989 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
SUCLG1-202ENST00000430989 RAD54L2Q9Y4B4 1467 aa20.61■□□□□ 0.89
SUCLG1-202ENST00000430989 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
SUCLG1-202ENST00000430989 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
SUCLG1-202ENST00000430989 FAM9AQ8IZU1 332 aaPredicted RBP20.59■□□□□ 0.89
SUCLG1-202ENST00000430989 CUX2O14529 1486 aa20.58■□□□□ 0.89
SUCLG1-202ENST00000430989 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
SUCLG1-202ENST00000430989 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
SUCLG1-202ENST00000430989 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
SUCLG1-202ENST00000430989 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
SUCLG1-202ENST00000430989 IGF1RP08069 1367 aa20.46■□□□□ 0.87
SUCLG1-202ENST00000430989 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
SUCLG1-202ENST00000430989 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
SUCLG1-202ENST00000430989 KIF21BO75037 1637 aa20.43■□□□□ 0.86
SUCLG1-202ENST00000430989 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
SUCLG1-202ENST00000430989 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
SUCLG1-202ENST00000430989 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
SUCLG1-202ENST00000430989 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
SUCLG1-202ENST00000430989 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
SUCLG1-202ENST00000430989 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
SUCLG1-202ENST00000430989 CUL7Q14999 1698 aa20.36■□□□□ 0.85
SUCLG1-202ENST00000430989 CARMIL1Q5VZK9 1371 aa20.35■□□□□ 0.85
SUCLG1-202ENST00000430989 GRIN2BQ13224 1484 aa20.35■□□□□ 0.85
SUCLG1-202ENST00000430989 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
SUCLG1-202ENST00000430989 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
SUCLG1-202ENST00000430989 RAPGEF2Q9Y4G8 1499 aa20.3■□□□□ 0.84
SUCLG1-202ENST00000430989 TNIKQ9UKE5 1360 aa20.28■□□□□ 0.84
SUCLG1-202ENST00000430989 UBTFP17480 764 aaKnown RBP20.25■□□□□ 0.83
SUCLG1-202ENST00000430989 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
SUCLG1-202ENST00000430989 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
SUCLG1-202ENST00000430989 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
SUCLG1-202ENST00000430989 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
SUCLG1-202ENST00000430989 FOXD1Q16676 465 aa20.19■□□□□ 0.82
SUCLG1-202ENST00000430989 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
SUCLG1-202ENST00000430989 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms