RNA–Protein interactions for RNA: ENST00000430871.3

VTCN1-204, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 5 BASIC

Gene VTCN1, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-204ENST00000430871 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
VTCN1-204ENST00000430871 CCDC180Q9P1Z9 1646 aa14.02□□□□□ -0.16
VTCN1-204ENST00000430871 ABCC9O60706 1549 aa13.94□□□□□ -0.18
VTCN1-204ENST00000430871 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
VTCN1-204ENST00000430871 NACADO15069 1562 aa13.24□□□□□ -0.29
VTCN1-204ENST00000430871 UNC13AQ9UPW8 1703 aa13.08□□□□□ -0.32
VTCN1-204ENST00000430871 MYO15BQ96JP2 1530 aa13.05□□□□□ -0.32
VTCN1-204ENST00000430871 DCAF8L2P0C7V8 631 aa13.05□□□□□ -0.32
VTCN1-204ENST00000430871 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
VTCN1-204ENST00000430871 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
VTCN1-204ENST00000430871 BICRAQ9NZM4 1560 aa12.9□□□□□ -0.35
VTCN1-204ENST00000430871 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
VTCN1-204ENST00000430871 ZCCHC6Q5VYS8 1495 aaKnown RBP12.85□□□□□ -0.35
VTCN1-204ENST00000430871 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
VTCN1-204ENST00000430871 SHROOM4Q9ULL8 1493 aa12.78□□□□□ -0.36
VTCN1-204ENST00000430871 SCRIBQ14160 1630 aa12.68□□□□□ -0.38
VTCN1-204ENST00000430871 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
VTCN1-204ENST00000430871 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
VTCN1-204ENST00000430871 EIF4G1Q04637 1599 aaKnown RBP12.6□□□□□ -0.39
VTCN1-204ENST00000430871 CECR2Q9BXF3 1484 aa12.58□□□□□ -0.4
VTCN1-204ENST00000430871 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
VTCN1-204ENST00000430871 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
VTCN1-204ENST00000430871 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
VTCN1-204ENST00000430871 ATAD2BQ9ULI0 1458 aa12.12□□□□□ -0.47
VTCN1-204ENST00000430871 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
VTCN1-204ENST00000430871 CUX2O14529 1486 aa12.1□□□□□ -0.47
VTCN1-204ENST00000430871 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
VTCN1-204ENST00000430871 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
VTCN1-204ENST00000430871 ERCC6Q03468 1493 aa12.07□□□□□ -0.48
VTCN1-204ENST00000430871 PEG3Q9GZU2 1588 aa12.03□□□□□ -0.48
VTCN1-204ENST00000430871 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
VTCN1-204ENST00000430871 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
VTCN1-204ENST00000430871 NESP48681 1621 aa11.95□□□□□ -0.5
VTCN1-204ENST00000430871 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
VTCN1-204ENST00000430871 THOC2Q8NI27 1593 aaKnown RBP11.9□□□□□ -0.5
VTCN1-204ENST00000430871 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
VTCN1-204ENST00000430871 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
VTCN1-204ENST00000430871 WIZO95785 1651 aa11.81□□□□□ -0.52
VTCN1-204ENST00000430871 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
VTCN1-204ENST00000430871 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
VTCN1-204ENST00000430871 WDR62O43379 1518 aa11.73□□□□□ -0.53
VTCN1-204ENST00000430871 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
VTCN1-204ENST00000430871 PRDM2Q13029 1718 aa11.67□□□□□ -0.54
VTCN1-204ENST00000430871 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
VTCN1-204ENST00000430871 CFTRP13569 1480 aa11.65□□□□□ -0.54
VTCN1-204ENST00000430871 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.54
VTCN1-204ENST00000430871 RSF1Q96T23 1441 aaPredicted RBP11.65□□□□□ -0.54
VTCN1-204ENST00000430871 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
VTCN1-204ENST00000430871 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
VTCN1-204ENST00000430871 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
VTCN1-204ENST00000430871 CCDC88BA6NC98 1476 aa11.5□□□□□ -0.57
VTCN1-204ENST00000430871 ABCC8Q09428 1581 aa11.47□□□□□ -0.57
VTCN1-204ENST00000430871 IFT140Q96RY7 1462 aa11.46□□□□□ -0.57
VTCN1-204ENST00000430871 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
VTCN1-204ENST00000430871 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
VTCN1-204ENST00000430871 ZNF608Q9ULD9 1512 aaPredicted RBP11.39□□□□□ -0.59
VTCN1-204ENST00000430871 EIF4G3O43432 1585 aaKnown RBP11.38□□□□□ -0.59
VTCN1-204ENST00000430871 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
VTCN1-204ENST00000430871 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
VTCN1-204ENST00000430871 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
VTCN1-204ENST00000430871 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
VTCN1-204ENST00000430871 CHD1O14646 1710 aa11.35□□□□□ -0.59
VTCN1-204ENST00000430871 ARHGEF11O15085 1522 aa11.31□□□□□ -0.6
VTCN1-204ENST00000430871 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
VTCN1-204ENST00000430871 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
VTCN1-204ENST00000430871 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.6
VTCN1-204ENST00000430871 SOGA1O94964 1423 aa11.26□□□□□ -0.61
VTCN1-204ENST00000430871 RAD54L2Q9Y4B4 1467 aa11.24□□□□□ -0.61
VTCN1-204ENST00000430871 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
VTCN1-204ENST00000430871 FBLN2P98095 1184 aa11.22□□□□□ -0.61
VTCN1-204ENST00000430871 CUX1P39880 1505 aa11.21□□□□□ -0.61
VTCN1-204ENST00000430871 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
VTCN1-204ENST00000430871 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
VTCN1-204ENST00000430871 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
VTCN1-204ENST00000430871 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
VTCN1-204ENST00000430871 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
VTCN1-204ENST00000430871 SNAPC4Q5SXM2 1469 aa11.19□□□□□ -0.62
VTCN1-204ENST00000430871 ARAP1Q96P48 1450 aa11.19□□□□□ -0.62
VTCN1-204ENST00000430871 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
VTCN1-204ENST00000430871 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
VTCN1-204ENST00000430871 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
VTCN1-204ENST00000430871 SYNJ2O15056 1496 aa11.15□□□□□ -0.62
VTCN1-204ENST00000430871 GAPVD1Q14C86 1478 aa11.13□□□□□ -0.63
VTCN1-204ENST00000430871 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
VTCN1-204ENST00000430871 ABCA5Q8WWZ7 1642 aa11.13□□□□□ -0.63
VTCN1-204ENST00000430871 TRHP20396 242 aaPredicted RBP11.11□□□□□ -0.63
VTCN1-204ENST00000430871 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
VTCN1-204ENST00000430871 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
VTCN1-204ENST00000430871 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
VTCN1-204ENST00000430871 PHF23Q9BUL5 403 aaPredicted RBP11.06□□□□□ -0.64
VTCN1-204ENST00000430871 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
VTCN1-204ENST00000430871 ADAMTS12P58397 1594 aa11.03□□□□□ -0.64
VTCN1-204ENST00000430871 GRIN2AQ12879 1464 aa11.03□□□□□ -0.64
VTCN1-204ENST00000430871 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
VTCN1-204ENST00000430871 NUP160Q12769 1436 aa11□□□□□ -0.65
VTCN1-204ENST00000430871 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
VTCN1-204ENST00000430871 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
VTCN1-204ENST00000430871 SHROOM2Q13796 1616 aa10.98□□□□□ -0.65
VTCN1-204ENST00000430871 SENP3Q9H4L4 574 aaPredicted RBP10.97□□□□□ -0.65
VTCN1-204ENST00000430871 ERCC6L2Q5T890 1561 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms