RNA–Protein interactions for RNA: ENST00000430533.1

PREB-204, Transcript of prolactin regulatory element binding, humanhuman

TSL 2

Gene PREB, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-204ENST00000430533 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
PREB-204ENST00000430533 ABCC9O60706 1549 aa19.83■□□□□ 0.77
PREB-204ENST00000430533 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
PREB-204ENST00000430533 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
PREB-204ENST00000430533 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
PREB-204ENST00000430533 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
PREB-204ENST00000430533 NACADO15069 1562 aa18.26■□□□□ 0.51
PREB-204ENST00000430533 UNC13AQ9UPW8 1703 aa18.22■□□□□ 0.51
PREB-204ENST00000430533 DCAF8L2P0C7V8 631 aa18.18■□□□□ 0.5
PREB-204ENST00000430533 BICRAQ9NZM4 1560 aa18.12■□□□□ 0.49
PREB-204ENST00000430533 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
PREB-204ENST00000430533 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
PREB-204ENST00000430533 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
PREB-204ENST00000430533 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
PREB-204ENST00000430533 DCAF1Q9Y4B6 1507 aa17.82■□□□□ 0.44
PREB-204ENST00000430533 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
PREB-204ENST00000430533 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
PREB-204ENST00000430533 SHROOM4Q9ULL8 1493 aa17.62■□□□□ 0.41
PREB-204ENST00000430533 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
PREB-204ENST00000430533 CUX2O14529 1486 aa17.24■□□□□ 0.35
PREB-204ENST00000430533 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
PREB-204ENST00000430533 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
PREB-204ENST00000430533 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
PREB-204ENST00000430533 NESP48681 1621 aa16.9■□□□□ 0.3
PREB-204ENST00000430533 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
PREB-204ENST00000430533 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
PREB-204ENST00000430533 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
PREB-204ENST00000430533 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
PREB-204ENST00000430533 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
PREB-204ENST00000430533 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
PREB-204ENST00000430533 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
PREB-204ENST00000430533 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
PREB-204ENST00000430533 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PREB-204ENST00000430533 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
PREB-204ENST00000430533 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
PREB-204ENST00000430533 PEG3Q9GZU2 1588 aa16.45■□□□□ 0.22
PREB-204ENST00000430533 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
PREB-204ENST00000430533 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
PREB-204ENST00000430533 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
PREB-204ENST00000430533 WDR62O43379 1518 aa16.39■□□□□ 0.21
PREB-204ENST00000430533 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
PREB-204ENST00000430533 WIZO95785 1651 aa16.32■□□□□ 0.2
PREB-204ENST00000430533 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
PREB-204ENST00000430533 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
PREB-204ENST00000430533 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
PREB-204ENST00000430533 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
PREB-204ENST00000430533 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
PREB-204ENST00000430533 CEP164Q9UPV0 1460 aa16.21■□□□□ 0.19
PREB-204ENST00000430533 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
PREB-204ENST00000430533 ARHGEF11O15085 1522 aa16.14■□□□□ 0.18
PREB-204ENST00000430533 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
PREB-204ENST00000430533 URB2Q14146 1524 aaKnown RBP16.12■□□□□ 0.17
PREB-204ENST00000430533 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
PREB-204ENST00000430533 CFTRP13569 1480 aa16.06■□□□□ 0.16
PREB-204ENST00000430533 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
PREB-204ENST00000430533 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
PREB-204ENST00000430533 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
PREB-204ENST00000430533 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
PREB-204ENST00000430533 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
PREB-204ENST00000430533 CHD1O14646 1710 aa15.88■□□□□ 0.13
PREB-204ENST00000430533 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.13
PREB-204ENST00000430533 FBLN2P98095 1184 aa15.82■□□□□ 0.12
PREB-204ENST00000430533 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.124e-7■■■■■ 27.6
PREB-204ENST00000430533 TOPBP1Q92547 1522 aa15.82■□□□□ 0.12
PREB-204ENST00000430533 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
PREB-204ENST00000430533 TARBP1Q13395 1621 aaKnown RBP15.73■□□□□ 0.11
PREB-204ENST00000430533 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
PREB-204ENST00000430533 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
PREB-204ENST00000430533 CLASP1Q7Z460 1538 aa15.66■□□□□ 0.1
PREB-204ENST00000430533 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
PREB-204ENST00000430533 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
PREB-204ENST00000430533 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
PREB-204ENST00000430533 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
PREB-204ENST00000430533 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.08
PREB-204ENST00000430533 SOGA1O94964 1423 aa15.55■□□□□ 0.08
PREB-204ENST00000430533 SYNJ1O43426 1573 aa15.54■□□□□ 0.08
PREB-204ENST00000430533 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
PREB-204ENST00000430533 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
PREB-204ENST00000430533 ILDR1Q86SU0 546 aaPredicted RBP15.52■□□□□ 0.08
PREB-204ENST00000430533 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
PREB-204ENST00000430533 CUX1P39880 1505 aa15.47■□□□□ 0.07
PREB-204ENST00000430533 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
PREB-204ENST00000430533 ERCC6L2Q5T890 1561 aa15.45■□□□□ 0.06
PREB-204ENST00000430533 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
PREB-204ENST00000430533 SYNJ2O15056 1496 aa15.45■□□□□ 0.06
PREB-204ENST00000430533 GRIN2BQ13224 1484 aa15.43■□□□□ 0.06
PREB-204ENST00000430533 FGD5Q6ZNL6 1462 aa15.43■□□□□ 0.06
PREB-204ENST00000430533 KIF13AQ9H1H9 1805 aa15.41■□□□□ 0.06
PREB-204ENST00000430533 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
PREB-204ENST00000430533 KDM4FA0A1W2PPD8 638 aa15.39■□□□□ 0.05
PREB-204ENST00000430533 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
PREB-204ENST00000430533 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
PREB-204ENST00000430533 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
PREB-204ENST00000430533 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
PREB-204ENST00000430533 FAM69CQ0P6D2 419 aa15.26■□□□□ 0.03
PREB-204ENST00000430533 GRIN2AQ12879 1464 aa15.25■□□□□ 0.03
PREB-204ENST00000430533 SHROOM2Q13796 1616 aa15.23■□□□□ 0.03
PREB-204ENST00000430533 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
PREB-204ENST00000430533 NUP160Q12769 1436 aa15.23■□□□□ 0.03
PREB-204ENST00000430533 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms