RNA–Protein interactions for RNA: ENST00000430362.1

PITRM1-205, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 3

Gene PITRM1, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-205ENST00000430362 NISCHQ9Y2I1 1504 aa21.54■■□□□ 1.04
PITRM1-205ENST00000430362 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
PITRM1-205ENST00000430362 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
PITRM1-205ENST00000430362 ABCC9O60706 1549 aa19.22■□□□□ 0.67
PITRM1-205ENST00000430362 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
PITRM1-205ENST00000430362 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PITRM1-205ENST00000430362 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
PITRM1-205ENST00000430362 NACADO15069 1562 aa18.17■□□□□ 0.5
PITRM1-205ENST00000430362 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
PITRM1-205ENST00000430362 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
PITRM1-205ENST00000430362 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
PITRM1-205ENST00000430362 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
PITRM1-205ENST00000430362 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
PITRM1-205ENST00000430362 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
PITRM1-205ENST00000430362 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
PITRM1-205ENST00000430362 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
PITRM1-205ENST00000430362 SHROOM4Q9ULL8 1493 aa17.44■□□□□ 0.38
PITRM1-205ENST00000430362 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
PITRM1-205ENST00000430362 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
PITRM1-205ENST00000430362 CECR2Q9BXF3 1484 aa17.26■□□□□ 0.35
PITRM1-205ENST00000430362 SMARCA4P51532 1647 aa16.81■□□□□ 0.28
PITRM1-205ENST00000430362 ATAD2BQ9ULI0 1458 aa16.75■□□□□ 0.27
PITRM1-205ENST00000430362 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
PITRM1-205ENST00000430362 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
PITRM1-205ENST00000430362 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
PITRM1-205ENST00000430362 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
PITRM1-205ENST00000430362 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
PITRM1-205ENST00000430362 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.25
PITRM1-205ENST00000430362 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
PITRM1-205ENST00000430362 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
PITRM1-205ENST00000430362 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
PITRM1-205ENST00000430362 NESP48681 1621 aa16.55■□□□□ 0.24
PITRM1-205ENST00000430362 WIZO95785 1651 aa16.49■□□□□ 0.23
PITRM1-205ENST00000430362 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
PITRM1-205ENST00000430362 CUX2O14529 1486 aa16.42■□□□□ 0.22
PITRM1-205ENST00000430362 LAMC3Q9Y6N6 1575 aa16.39■□□□□ 0.21
PITRM1-205ENST00000430362 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
PITRM1-205ENST00000430362 THOC2Q8NI27 1593 aaKnown RBP16.32■□□□□ 0.2
PITRM1-205ENST00000430362 RSF1Q96T23 1441 aaPredicted RBP16.3■□□□□ 0.2
PITRM1-205ENST00000430362 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
PITRM1-205ENST00000430362 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
PITRM1-205ENST00000430362 DNAJC5Q9H3Z4 198 aa16.25■□□□□ 0.19
PITRM1-205ENST00000430362 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
PITRM1-205ENST00000430362 MRC2Q9UBG0 1479 aa16.16■□□□□ 0.18
PITRM1-205ENST00000430362 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
PITRM1-205ENST00000430362 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
PITRM1-205ENST00000430362 CFTRP13569 1480 aa16.1■□□□□ 0.17
PITRM1-205ENST00000430362 WDR62O43379 1518 aa16.1■□□□□ 0.17
PITRM1-205ENST00000430362 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
PITRM1-205ENST00000430362 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
PITRM1-205ENST00000430362 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
PITRM1-205ENST00000430362 TOPBP1Q92547 1522 aa15.84■□□□□ 0.13
PITRM1-205ENST00000430362 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
PITRM1-205ENST00000430362 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
PITRM1-205ENST00000430362 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
PITRM1-205ENST00000430362 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
PITRM1-205ENST00000430362 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
PITRM1-205ENST00000430362 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
PITRM1-205ENST00000430362 EIF4G3O43432 1585 aaKnown RBP15.72■□□□□ 0.11
PITRM1-205ENST00000430362 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
PITRM1-205ENST00000430362 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
PITRM1-205ENST00000430362 TARBP1Q13395 1621 aaKnown RBP15.67■□□□□ 0.1
PITRM1-205ENST00000430362 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
PITRM1-205ENST00000430362 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
PITRM1-205ENST00000430362 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
PITRM1-205ENST00000430362 CUX1P39880 1505 aa15.63■□□□□ 0.09
PITRM1-205ENST00000430362 CHD1O14646 1710 aa15.63■□□□□ 0.09
PITRM1-205ENST00000430362 SOGA1O94964 1423 aa15.61■□□□□ 0.09
PITRM1-205ENST00000430362 FBLN2P98095 1184 aa15.59■□□□□ 0.09
PITRM1-205ENST00000430362 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
PITRM1-205ENST00000430362 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
PITRM1-205ENST00000430362 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
PITRM1-205ENST00000430362 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
PITRM1-205ENST00000430362 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
PITRM1-205ENST00000430362 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
PITRM1-205ENST00000430362 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
PITRM1-205ENST00000430362 PBRM1Q86U86 1689 aa15.48■□□□□ 0.07
PITRM1-205ENST00000430362 FOXD1Q16676 465 aa15.47■□□□□ 0.07
PITRM1-205ENST00000430362 GRIN2BQ13224 1484 aa15.46■□□□□ 0.06
PITRM1-205ENST00000430362 CHMP7Q8WUX9 453 aaPredicted RBP15.44■□□□□ 0.06
PITRM1-205ENST00000430362 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
PITRM1-205ENST00000430362 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
PITRM1-205ENST00000430362 MAGI1Q96QZ7 1491 aaPredicted RBP15.42■□□□□ 0.06
PITRM1-205ENST00000430362 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
PITRM1-205ENST00000430362 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
PITRM1-205ENST00000430362 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
PITRM1-205ENST00000430362 ABCA10Q8WWZ4 1543 aa15.4■□□□□ 0.06
PITRM1-205ENST00000430362 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
PITRM1-205ENST00000430362 CYB5RLQ6IPT4 315 aa15.39■□□□□ 0.05
PITRM1-205ENST00000430362 SYNJ2O15056 1496 aa15.38■□□□□ 0.05
PITRM1-205ENST00000430362 ARAP1Q96P48 1450 aa15.35■□□□□ 0.05
PITRM1-205ENST00000430362 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
PITRM1-205ENST00000430362 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
PITRM1-205ENST00000430362 GRIN2AQ12879 1464 aa15.27■□□□□ 0.03
PITRM1-205ENST00000430362 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
PITRM1-205ENST00000430362 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
PITRM1-205ENST00000430362 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
PITRM1-205ENST00000430362 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
PITRM1-205ENST00000430362 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
PITRM1-205ENST00000430362 NUP160Q12769 1436 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms